RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 MAP4K4O95819 1239 aaPredicted RBP12.46□□□□□ -0.41
SMC4-210ENST00000469762 FKBP5Q13451 457 aaPredicted RBP12.46□□□□□ -0.41
SMC4-210ENST00000469762 CNPY2Q9Y2B0 182 aa12.46□□□□□ -0.41
SMC4-210ENST00000469762 AP5Z1O43299 807 aa12.46□□□□□ -0.41
SMC4-210ENST00000469762 IL17REQ8NFR9 667 aa12.46□□□□□ -0.41
SMC4-210ENST00000469762 SNX14Q9Y5W7 946 aa12.46□□□□□ -0.41
SMC4-210ENST00000469762 GNAI3P08754 354 aa12.46□□□□□ -0.42
SMC4-210ENST00000469762 RUFY3Q7L099 469 aa12.46□□□□□ -0.42
SMC4-210ENST00000469762 FUCA2Q9BTY2 467 aa12.46□□□□□ -0.42
SMC4-210ENST00000469762 LSG1Q9H089 658 aaKnown RBP12.46□□□□□ -0.42
SMC4-210ENST00000469762 AOX1Q06278 1338 aa12.46□□□□□ -0.42
SMC4-210ENST00000469762 LARGE1O95461 756 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 PXDNLA1KZ92 1463 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 SBNO1A3KN83 1393 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 POLA2Q14181 598 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 SOS1Q07889 1333 aaPredicted RBP12.45□□□□□ -0.42
SMC4-210ENST00000469762 RAD50Q92878 1312 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 SGSM2O43147 1006 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 CSPP1Q1MSJ5 1256 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 SASS6Q6UVJ0 657 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 PHAXQ9H814 394 aaKnown RBP12.45□□□□□ -0.42
SMC4-210ENST00000469762 FLT4P35916 1363 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 DYNC1I1O14576 645 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 C17orf53Q8N3J3 647 aaPredicted RBP12.45□□□□□ -0.42
SMC4-210ENST00000469762 PRDM4Q9UKN5 801 aa12.45□□□□□ -0.42
SMC4-210ENST00000469762 CPA1P15085 419 aa12.44□□□□□ -0.42
SMC4-210ENST00000469762 MCCP23508 829 aa12.44□□□□□ -0.42
SMC4-210ENST00000469762 ST3GAL1Q11201 340 aa12.44□□□□□ -0.42
SMC4-210ENST00000469762 RTF1Q92541 710 aaKnown RBP12.44□□□□□ -0.42
SMC4-210ENST00000469762 USP25Q9UHP3 1055 aa12.44□□□□□ -0.42
SMC4-210ENST00000469762 WDR33Q9C0J8 1336 aaKnown RBP12.44□□□□□ -0.42
SMC4-210ENST00000469762 TMEM2Q9UHN6 1383 aa12.44□□□□□ -0.42
SMC4-210ENST00000469762 AK2P54819 239 aa12.44□□□□□ -0.42
SMC4-210ENST00000469762 COL9A3Q14050 684 aaPredicted RBP12.44□□□□□ -0.42
SMC4-210ENST00000469762 EPB41L2O43491 1005 aaKnown RBP12.44□□□□□ -0.42
SMC4-210ENST00000469762 SYT1P21579 422 aa12.43□□□□□ -0.42
SMC4-210ENST00000469762 CCDC30Q5VVM6 783 aa12.43□□□□□ -0.42
SMC4-210ENST00000469762 TSC1Q92574 1164 aa12.43□□□□□ -0.42
SMC4-210ENST00000469762 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
SMC4-210ENST00000469762 ZNF710Q8N1W2 664 aa12.43□□□□□ -0.42
SMC4-210ENST00000469762 HCLS1P14317 486 aaPredicted RBP12.43□□□□□ -0.42
SMC4-210ENST00000469762 LTKP29376 864 aa12.43□□□□□ -0.42
SMC4-210ENST00000469762 PPP1R42Q7Z4L9 355 aa12.43□□□□□ -0.42
SMC4-210ENST00000469762 TTC12Q9H892 705 aaPredicted RBP12.43□□□□□ -0.42
SMC4-210ENST00000469762 ZSCAN22P10073 491 aaPredicted RBP12.42□□□□□ -0.42
SMC4-210ENST00000469762 NBPF7P0C2Y1 421 aaPredicted RBP12.42□□□□□ -0.42
SMC4-210ENST00000469762 RHPN1Q8TCX5 695 aa12.42□□□□□ -0.42
SMC4-210ENST00000469762 PIBF1Q8WXW3 757 aa12.42□□□□□ -0.42
SMC4-210ENST00000469762 FAM69CQ0P6D2 419 aa12.42□□□□□ -0.42
SMC4-210ENST00000469762 ADCY5O95622 1261 aa12.41□□□□□ -0.42
SMC4-210ENST00000469762 KIAA2012Q0VF49 1180 aa12.41□□□□□ -0.42
SMC4-210ENST00000469762 UVSSAQ2YD98 709 aa12.41□□□□□ -0.42
SMC4-210ENST00000469762 CCDC183Q5T5S1 534 aa12.41□□□□□ -0.42
SMC4-210ENST00000469762 ZBTB7CA1YPR0 619 aa12.41□□□□□ -0.42
SMC4-210ENST00000469762 HTATSF1O43719 755 aaKnown RBP12.41□□□□□ -0.42
SMC4-210ENST00000469762 MYRIPQ8NFW9 859 aa12.41□□□□□ -0.42
SMC4-210ENST00000469762 ADCK5Q3MIX3 580 aa12.41□□□□□ -0.42
SMC4-210ENST00000469762 SYAP1Q96A49 352 aaPredicted RBP12.41□□□□□ -0.42
SMC4-210ENST00000469762 HYPKQ9NX55 129 aa12.41□□□□□ -0.42
SMC4-210ENST00000469762 GNAT3A8MTJ3 354 aa12.4□□□□□ -0.42
SMC4-210ENST00000469762 STX6O43752 255 aa12.4□□□□□ -0.42
SMC4-210ENST00000469762 SPG7Q9UQ90 795 aa12.4□□□□□ -0.42
SMC4-210ENST00000469762 UBTFL1P0CB47 393 aaPredicted RBP12.4□□□□□ -0.42
SMC4-210ENST00000469762 PTH1RQ03431 593 aa12.4□□□□□ -0.42
SMC4-210ENST00000469762 MAP7D2Q96T17 732 aa12.4□□□□□ -0.42
SMC4-210ENST00000469762 SPTLC3Q9NUV7 552 aa12.4□□□□□ -0.42
SMC4-210ENST00000469762 SURF6O75683 361 aaKnown RBP12.4□□□□□ -0.42
SMC4-210ENST00000469762 F13A1P00488 732 aa12.4□□□□□ -0.42
SMC4-210ENST00000469762 NOLC1Q14978 699 aaKnown RBP eCLIP12.4□□□□□ -0.424e-16■■■■■ 30.2
SMC4-210ENST00000469762 KCNF1Q9H3M0 494 aa12.4□□□□□ -0.42
SMC4-210ENST00000469762 MED1Q15648 1581 aaPredicted RBP12.4□□□□□ -0.43
SMC4-210ENST00000469762 TTC21AQ8NDW8 1320 aa12.4□□□□□ -0.43
SMC4-210ENST00000469762 FAM184AQ8NB25 1140 aa12.39□□□□□ -0.43
SMC4-210ENST00000469762 USP42Q9H9J4 1324 aaKnown RBP12.39□□□□□ -0.43
SMC4-210ENST00000469762 UBE2HP62256 183 aa12.39□□□□□ -0.43
SMC4-210ENST00000469762 MTMR6Q9Y217 621 aa12.39□□□□□ -0.43
SMC4-210ENST00000469762 KDM4AO75164 1064 aa12.39□□□□□ -0.43
SMC4-210ENST00000469762 GTF2F1P35269 517 aaKnown RBP eCLIP12.39□□□□□ -0.438e-49■■■■■ 172.1
SMC4-210ENST00000469762 GIMAP6Q6P9H5 292 aa12.39□□□□□ -0.43
SMC4-210ENST00000469762 LIMCH1Q9UPQ0 1083 aa12.39□□□□□ -0.43
SMC4-210ENST00000469762 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.39□□□□□ -0.43
SMC4-210ENST00000469762 KDM3BQ7LBC6 1761 aa12.39□□□□□ -0.43
SMC4-210ENST00000469762 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
SMC4-210ENST00000469762 PHF14O94880 888 aa12.38□□□□□ -0.43
SMC4-210ENST00000469762 TPRNQ4KMQ1 711 aa12.38□□□□□ -0.43
SMC4-210ENST00000469762 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
SMC4-210ENST00000469762 PTMAP06454 111 aaKnown RBP12.38□□□□□ -0.43
SMC4-210ENST00000469762 CWC27Q6UX04 472 aaKnown RBP12.38□□□□□ -0.43
SMC4-210ENST00000469762 TNRQ92752 1358 aa12.38□□□□□ -0.43
SMC4-210ENST00000469762 HOXC9P31274 260 aa12.38□□□□□ -0.43
SMC4-210ENST00000469762 DNM1Q05193 864 aaKnown RBP12.38□□□□□ -0.43
SMC4-210ENST00000469762 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
SMC4-210ENST00000469762 BEND3Q5T5X7 828 aa12.38□□□□□ -0.43
SMC4-210ENST00000469762 KCNB2Q92953 911 aa12.38□□□□□ -0.43
SMC4-210ENST00000469762 USP54Q70EL1 1684 aa12.38□□□□□ -0.43
SMC4-210ENST00000469762 ARID3AQ99856 593 aa12.37□□□□□ -0.43
SMC4-210ENST00000469762 PLEKHG1Q9ULL1 1385 aa12.37□□□□□ -0.43
SMC4-210ENST00000469762 DIP2AQ14689 1571 aa12.37□□□□□ -0.43
SMC4-210ENST00000469762 SRGAP3O43295 1099 aa12.37□□□□□ -0.43
SMC4-210ENST00000469762 FIBPO43427 364 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms