RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 FAM182BQ5T319 152 aa12.51□□□□□ -0.41
SEMA4D-215ENST00000469653 MPRIPQ6WCQ1 1025 aa12.51□□□□□ -0.41
SEMA4D-215ENST00000469653 KRT27Q7Z3Y8 459 aa12.51□□□□□ -0.41
SEMA4D-215ENST00000469653 ANTXR1Q9H6X2 564 aa12.51□□□□□ -0.41
SEMA4D-215ENST00000469653 SCN11AQ9UI33 1791 aa12.5□□□□□ -0.41
SEMA4D-215ENST00000469653 RTF1Q92541 710 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-215ENST00000469653 DCTN1Q14203 1278 aa12.5□□□□□ -0.41
SEMA4D-215ENST00000469653 MCM10Q7L590 875 aa12.5□□□□□ -0.41
SEMA4D-215ENST00000469653 PLCD3Q8N3E9 789 aa12.5□□□□□ -0.41
SEMA4D-215ENST00000469653 COG6Q9Y2V7 657 aa12.5□□□□□ -0.41
SEMA4D-215ENST00000469653 HSP90AB1P08238 724 aaKnown RBP12.5□□□□□ -0.41
SEMA4D-215ENST00000469653 PANK1Q8TE04 598 aa12.5□□□□□ -0.41
SEMA4D-215ENST00000469653 LGR6Q9HBX8 967 aa12.5□□□□□ -0.41
SEMA4D-215ENST00000469653 TRIM35Q9UPQ4 493 aa12.5□□□□□ -0.41
SEMA4D-215ENST00000469653 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-215ENST00000469653 DCAF5Q96JK2 942 aa12.49□□□□□ -0.41
SEMA4D-215ENST00000469653 KCNG1Q9UIX4 513 aa12.49□□□□□ -0.41
SEMA4D-215ENST00000469653 EP400Q96L91 3159 aa12.49□□□□□ -0.41
SEMA4D-215ENST00000469653 IL17REQ8NFR9 667 aa12.49□□□□□ -0.41
SEMA4D-215ENST00000469653 KDM6AO15550 1401 aaPredicted RBP12.49□□□□□ -0.41
SEMA4D-215ENST00000469653 TOGARAM1Q9Y4F4 1720 aa12.49□□□□□ -0.41
SEMA4D-215ENST00000469653 E9PSI1 815 aa12.48□□□□□ -0.41
SEMA4D-215ENST00000469653 RNMTO43148 476 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-215ENST00000469653 HTATSF1O43719 755 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-215ENST00000469653 RAD21O60216 631 aa12.48□□□□□ -0.41
SEMA4D-215ENST00000469653 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
SEMA4D-215ENST00000469653 DOT1LQ8TEK3 1739 aa12.48□□□□□ -0.41
SEMA4D-215ENST00000469653 THUMPD2Q9BTF0 503 aaKnown RBP12.48□□□□□ -0.41
SEMA4D-215ENST00000469653 PLCD4Q9BRC7 762 aa12.48□□□□□ -0.41
SEMA4D-215ENST00000469653 ITGB4P16144 1822 aa12.48□□□□□ -0.41
SEMA4D-215ENST00000469653 ADAMTS7Q9UKP4 1686 aa12.48□□□□□ -0.41
SEMA4D-215ENST00000469653 PDE3AQ14432 1141 aa12.47□□□□□ -0.41
SEMA4D-215ENST00000469653 PRDM16Q9HAZ2 1276 aa12.47□□□□□ -0.41
SEMA4D-215ENST00000469653 SBF2Q86WG5 1849 aa12.47□□□□□ -0.41
SEMA4D-215ENST00000469653 ACSBG1Q96GR2 724 aa12.47□□□□□ -0.41
SEMA4D-215ENST00000469653 BECN1Q14457 450 aa12.46□□□□□ -0.41
SEMA4D-215ENST00000469653 CCDC27Q2M243 656 aa12.46□□□□□ -0.41
SEMA4D-215ENST00000469653 NGEFQ8N5V2 710 aa12.46□□□□□ -0.41
SEMA4D-215ENST00000469653 FAM196AQ6ZSG2 479 aa12.46□□□□□ -0.42
SEMA4D-215ENST00000469653 SYTL4Q96C24 671 aaPredicted RBP12.46□□□□□ -0.42
SEMA4D-215ENST00000469653 CEMIPQ8WUJ3 1361 aa12.46□□□□□ -0.42
SEMA4D-215ENST00000469653 PIAS4Q8N2W9 510 aaPredicted RBP12.45□□□□□ -0.42
SEMA4D-215ENST00000469653 TBC1D2Q9BYX2 928 aa12.45□□□□□ -0.42
SEMA4D-215ENST00000469653 SIPA1L3O60292 1781 aaPredicted RBP12.45□□□□□ -0.42
SEMA4D-215ENST00000469653 ERVV-2B6SEH9 535 aa12.45□□□□□ -0.42
SEMA4D-215ENST00000469653 CLSTN1O94985 981 aa12.45□□□□□ -0.42
SEMA4D-215ENST00000469653 PRIM1P49642 420 aaKnown RBP12.45□□□□□ -0.42
SEMA4D-215ENST00000469653 CABP4P57796 275 aa12.45□□□□□ -0.42
SEMA4D-215ENST00000469653 TEFQ10587 303 aa12.45□□□□□ -0.42
SEMA4D-215ENST00000469653 NFATC2IPQ8NCF5 419 aa12.45□□□□□ -0.42
SEMA4D-215ENST00000469653 TNNQ9UQP3 1299 aa12.45□□□□□ -0.42
SEMA4D-215ENST00000469653 PCDHB15Q9Y5E8 787 aa12.44□□□□□ -0.42
SEMA4D-215ENST00000469653 BCL9O00512 1426 aa12.44□□□□□ -0.42
SEMA4D-215ENST00000469653 KCNQ2O43526 872 aa12.44□□□□□ -0.42
SEMA4D-215ENST00000469653 TBC1D32Q96NH3 1257 aa12.44□□□□□ -0.42
SEMA4D-215ENST00000469653 SLC52A2Q9HAB3 445 aa12.44□□□□□ -0.42
SEMA4D-215ENST00000469653 XRCC6P12956 609 aaKnown RBP eCLIP12.44□□□□□ -0.42
SEMA4D-215ENST00000469653 TMOD3Q9NYL9 352 aa12.43□□□□□ -0.42
SEMA4D-215ENST00000469653 NHSQ6T4R5 1651 aa12.43□□□□□ -0.42
SEMA4D-215ENST00000469653 MRC1P22897 1456 aa12.43□□□□□ -0.42
SEMA4D-215ENST00000469653 RLBP1P12271 317 aa12.43□□□□□ -0.42
SEMA4D-215ENST00000469653 PTMSP20962 102 aa12.43□□□□□ -0.42
SEMA4D-215ENST00000469653 L1TD1Q5T7N2 865 aaKnown RBP12.43□□□□□ -0.42
SEMA4D-215ENST00000469653 TAF7Q15545 349 aaPredicted RBP12.42□□□□□ -0.42
SEMA4D-215ENST00000469653 PTF1AQ7RTS3 328 aa12.42□□□□□ -0.42
SEMA4D-215ENST00000469653 PIGBQ92521 554 aa12.42□□□□□ -0.42
SEMA4D-215ENST00000469653 KDM4AO75164 1064 aa12.42□□□□□ -0.42
SEMA4D-215ENST00000469653 CALD1Q05682 793 aaKnown RBP12.42□□□□□ -0.42
SEMA4D-215ENST00000469653 WDR63Q8IWG1 891 aa12.42□□□□□ -0.42
SEMA4D-215ENST00000469653 PANK2Q9BZ23 570 aa12.42□□□□□ -0.42
SEMA4D-215ENST00000469653 MIS18AQ9NYP9 233 aa12.42□□□□□ -0.42
SEMA4D-215ENST00000469653 FSD2A1L4K1 749 aa12.41□□□□□ -0.42
SEMA4D-215ENST00000469653 IPO4Q8TEX9 1081 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-215ENST00000469653 BTAF1O14981 1849 aa12.41□□□□□ -0.42
SEMA4D-215ENST00000469653 TRIM37O94972 964 aa12.41□□□□□ -0.42
SEMA4D-215ENST00000469653 MFAP1P55081 439 aaKnown RBP12.41□□□□□ -0.42
SEMA4D-215ENST00000469653 BTBD11A6QL63 1104 aa12.41□□□□□ -0.42
SEMA4D-215ENST00000469653 PDZRN3Q9UPQ7 1066 aa12.41□□□□□ -0.42
SEMA4D-215ENST00000469653 KCTD17Q8N5Z5 321 aa12.4□□□□□ -0.42
SEMA4D-215ENST00000469653 ELL2O00472 640 aaPredicted RBP12.4□□□□□ -0.42
SEMA4D-215ENST00000469653 RARSP54136 660 aaKnown RBP12.4□□□□□ -0.43
SEMA4D-215ENST00000469653 SLC39A6Q13433 755 aa12.39□□□□□ -0.43
SEMA4D-215ENST00000469653 IFT57Q9NWB7 429 aa12.39□□□□□ -0.43
SEMA4D-215ENST00000469653 IL16Q14005 1332 aa12.39□□□□□ -0.43
SEMA4D-215ENST00000469653 TSPYL4Q9UJ04 414 aa12.39□□□□□ -0.43
SEMA4D-215ENST00000469653 KDM3BQ7LBC6 1761 aa12.39□□□□□ -0.43
SEMA4D-215ENST00000469653 HSP90AA1P07900 732 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 MCM4P33991 863 aa12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 GNAI1P63096 354 aa12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 TEX2Q8IWB9 1127 aa12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 ASAP1Q9ULH1 1129 aa12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 CHL1O00533 1208 aa12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 ZNF853P0CG23 659 aa12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 PAPPAQ13219 1627 aa12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 ILDR2Q71H61 639 aa12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 MBIPQ9NS73 344 aa12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 MTMR7Q9Y216 660 aa12.38□□□□□ -0.43
SEMA4D-215ENST00000469653 GOLGA6L3A6NEY3 463 aa12.37□□□□□ -0.43
SEMA4D-215ENST00000469653 KCNQ3O43525 872 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms