RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 USP16Q9Y5T5 823 aa16.25■□□□□ 0.19
TRAF4-208ENST00000469529 CANXP27824 592 aaKnown RBP16.24■□□□□ 0.19
TRAF4-208ENST00000469529 CAMKK2Q96RR4 588 aa16.24■□□□□ 0.19
TRAF4-208ENST00000469529 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
TRAF4-208ENST00000469529 INTS3Q68E01 1043 aaKnown RBP16.23■□□□□ 0.19
TRAF4-208ENST00000469529 CHMP4BQ9H444 224 aaKnown RBP16.23■□□□□ 0.19
TRAF4-208ENST00000469529 PPP4R2Q9NY27 417 aa16.23■□□□□ 0.19
TRAF4-208ENST00000469529 KCPQ6ZWJ8 1503 aa16.23■□□□□ 0.19
TRAF4-208ENST00000469529 TOGARAM1Q9Y4F4 1720 aa16.22■□□□□ 0.19
TRAF4-208ENST00000469529 ABCC4O15439 1325 aa16.22■□□□□ 0.19
TRAF4-208ENST00000469529 PRAMEF22A3QJZ6 481 aa16.22■□□□□ 0.19
TRAF4-208ENST00000469529 RLBP1P12271 317 aa16.22■□□□□ 0.19
TRAF4-208ENST00000469529 FLIIQ13045 1269 aa16.22■□□□□ 0.19
TRAF4-208ENST00000469529 LRP10Q7Z4F1 713 aa16.22■□□□□ 0.19
TRAF4-208ENST00000469529 EXOC6Q8TAG9 804 aa16.22■□□□□ 0.19
TRAF4-208ENST00000469529 PSDA5PKW4 1024 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-208ENST00000469529 TCERG1O14776 1098 aaKnown RBP16.21■□□□□ 0.19
TRAF4-208ENST00000469529 STARD3NLO95772 234 aa16.21■□□□□ 0.19
TRAF4-208ENST00000469529 IRX6P78412 446 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-208ENST00000469529 MVPQ14764 893 aaKnown RBP16.21■□□□□ 0.19
TRAF4-208ENST00000469529 G2E3Q7L622 706 aa16.21■□□□□ 0.19
TRAF4-208ENST00000469529 PANK1Q8TE04 598 aa16.21■□□□□ 0.19
TRAF4-208ENST00000469529 SYTL4Q96C24 671 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-208ENST00000469529 CRBNQ96SW2 442 aa16.21■□□□□ 0.19
TRAF4-208ENST00000469529 BCL11BQ9C0K0 894 aaPredicted RBP16.21■□□□□ 0.19
TRAF4-208ENST00000469529 CHPF2Q9P2E5 772 aa16.21■□□□□ 0.19
TRAF4-208ENST00000469529 PAPPAQ13219 1627 aa16.2■□□□□ 0.18
TRAF4-208ENST00000469529 VIRMAQ69YN4 1812 aaKnown RBP16.2■□□□□ 0.18
TRAF4-208ENST00000469529 KCNQ2O43526 872 aa16.2■□□□□ 0.18
TRAF4-208ENST00000469529 PTCD1O75127 700 aaKnown RBP16.2■□□□□ 0.18
TRAF4-208ENST00000469529 FTSJ3Q8IY81 847 aaKnown RBP16.2■□□□□ 0.18
TRAF4-208ENST00000469529 ACSBG1Q96GR2 724 aa16.2■□□□□ 0.18
TRAF4-208ENST00000469529 SLC4A9Q96Q91 983 aa16.2■□□□□ 0.18
TRAF4-208ENST00000469529 DDX19BQ9UMR2 479 aa16.2■□□□□ 0.18
TRAF4-208ENST00000469529 IBTKQ9P2D0 1353 aaPredicted RBP16.2■□□□□ 0.18
TRAF4-208ENST00000469529 SBF2Q86WG5 1849 aa16.19■□□□□ 0.18
TRAF4-208ENST00000469529 HMGB2P26583 209 aaKnown RBP16.19■□□□□ 0.18
TRAF4-208ENST00000469529 UBR2Q8IWV8 1755 aa16.18■□□□□ 0.18
TRAF4-208ENST00000469529 PHAXQ9H814 394 aaKnown RBP16.18■□□□□ 0.18
TRAF4-208ENST00000469529 LOC102724428A0A0B4J2F2 783 aa16.17■□□□□ 0.18
TRAF4-208ENST00000469529 ZBTB7BO15156 539 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-208ENST00000469529 CYP19A1P11511 503 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-208ENST00000469529 CCT4P50991 539 aaKnown RBP16.17■□□□□ 0.18
TRAF4-208ENST00000469529 SIK1P57059 783 aa16.17■□□□□ 0.18
TRAF4-208ENST00000469529 R3HDM1Q15032 1099 aaKnown RBP16.17■□□□□ 0.18
TRAF4-208ENST00000469529 KSR2Q6VAB6 950 aa16.17■□□□□ 0.18
TRAF4-208ENST00000469529 PTF1AQ7RTS3 328 aa16.17■□□□□ 0.18
TRAF4-208ENST00000469529 TMEM57Q8N5G2 664 aa16.17■□□□□ 0.18
TRAF4-208ENST00000469529 NECTIN2Q92692 538 aa16.17■□□□□ 0.18
TRAF4-208ENST00000469529 CLUAP1Q96AJ1 413 aa16.17■□□□□ 0.18
TRAF4-208ENST00000469529 TNNQ9UQP3 1299 aa16.17■□□□□ 0.18
TRAF4-208ENST00000469529 COG6Q9Y2V7 657 aa16.17■□□□□ 0.18
TRAF4-208ENST00000469529 RREB1Q92766 1687 aa16.16■□□□□ 0.18
TRAF4-208ENST00000469529 NBPF26B4DH59 902 aa16.16■□□□□ 0.18
TRAF4-208ENST00000469529 DDX58O95786 925 aaKnown RBP16.16■□□□□ 0.18
TRAF4-208ENST00000469529 FKBP5Q13451 457 aaPredicted RBP16.16■□□□□ 0.18
TRAF4-208ENST00000469529 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
TRAF4-208ENST00000469529 NBPF14Q5TI25 921 aa16.16■□□□□ 0.18
TRAF4-208ENST00000469529 NBPF10Q6P3W6 841 aaKnown RBP16.16■□□□□ 0.18
TRAF4-208ENST00000469529 DNAJC10Q8IXB1 793 aa16.16■□□□□ 0.18
TRAF4-208ENST00000469529 NBPF15Q8N660 670 aa16.16■□□□□ 0.18
TRAF4-208ENST00000469529 RBM42Q9BTD8 480 aaKnown RBP16.16■□□□□ 0.18
TRAF4-208ENST00000469529 ZBTB40Q9NUA8 1239 aa16.16■□□□□ 0.18
TRAF4-208ENST00000469529 PALLDQ8WX93 1383 aa16.15■□□□□ 0.18
TRAF4-208ENST00000469529 ITGB4P16144 1822 aa16.15■□□□□ 0.18
TRAF4-208ENST00000469529 CACNA1FO60840 1977 aa16.15■□□□□ 0.18
TRAF4-208ENST00000469529 PLSCR1O15162 318 aa16.15■□□□□ 0.18
TRAF4-208ENST00000469529 NUP188Q5SRE5 1749 aa16.14■□□□□ 0.17
TRAF4-208ENST00000469529 A1BGP04217 495 aa16.14■□□□□ 0.17
TRAF4-208ENST00000469529 RC3H1Q5TC82 1133 aaKnown RBP16.14■□□□□ 0.17
TRAF4-208ENST00000469529 COPS6Q7L5N1 327 aa16.14■□□□□ 0.17
TRAF4-208ENST00000469529 PI4KAP2A4QPH2 592 aa16.13■□□□□ 0.17
TRAF4-208ENST00000469529 ATP6V1AP38606 617 aa16.13■□□□□ 0.17
TRAF4-208ENST00000469529 IL6STP40189 918 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-208ENST00000469529 ANKRD13DQ6ZTN6 518 aa16.13■□□□□ 0.17
TRAF4-208ENST00000469529 PI4KAP1Q8N8J0 262 aa16.13■□□□□ 0.17
TRAF4-208ENST00000469529 DNAAF4Q8WXU2 420 aa16.13■□□□□ 0.17
TRAF4-208ENST00000469529 RGPD3A6NKT7 1758 aaPredicted RBP16.13■□□□□ 0.17
TRAF4-208ENST00000469529 RGPD4Q7Z3J3 1758 aa16.13■□□□□ 0.17
TRAF4-208ENST00000469529 ATP10DQ9P241 1426 aa16.12■□□□□ 0.17
TRAF4-208ENST00000469529 PXDNLA1KZ92 1463 aa16.12■□□□□ 0.17
TRAF4-208ENST00000469529 DOT1LQ8TEK3 1739 aa16.12■□□□□ 0.17
TRAF4-208ENST00000469529 BEND3Q5T5X7 828 aa16.12■□□□□ 0.17
TRAF4-208ENST00000469529 ITPRIPQ8IWB1 547 aa16.12■□□□□ 0.17
TRAF4-208ENST00000469529 PLBD2Q8NHP8 589 aa16.12■□□□□ 0.17
TRAF4-208ENST00000469529 XAGE3Q8WTP9 111 aa16.12■□□□□ 0.17
TRAF4-208ENST00000469529 ZNF831Q5JPB2 1677 aa16.11■□□□□ 0.17
TRAF4-208ENST00000469529 RGL2O15211 777 aa16.11■□□□□ 0.17
TRAF4-208ENST00000469529 ALDH1L1O75891 902 aa16.11■□□□□ 0.17
TRAF4-208ENST00000469529 ANXA1P04083 346 aa16.11■□□□□ 0.17
TRAF4-208ENST00000469529 INTS5Q6P9B9 1019 aaKnown RBP16.11■□□□□ 0.17
TRAF4-208ENST00000469529 CICQ96RK0 1608 aaPredicted RBP16.11■□□□□ 0.17
TRAF4-208ENST00000469529 ADCY9O60503 1353 aa16.11■□□□□ 0.17
TRAF4-208ENST00000469529 F6X3S4 739 aa16.1■□□□□ 0.17
TRAF4-208ENST00000469529 MYL6BP14649 208 aa16.1■□□□□ 0.17
TRAF4-208ENST00000469529 EIF5P55010 431 aaKnown RBP16.1■□□□□ 0.17
TRAF4-208ENST00000469529 ITPK1Q13572 414 aa16.1■□□□□ 0.17
TRAF4-208ENST00000469529 LINS1Q8NG48 757 aa16.1■□□□□ 0.17
TRAF4-208ENST00000469529 NHSQ6T4R5 1651 aa16.1■□□□□ 0.17
TRAF4-208ENST00000469529 LRP5O75197 1615 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms