RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 SOS1Q07889 1333 aaPredicted RBP17.09■□□□□ 0.33
GAPVD1-214ENST00000469528 KIF7Q2M1P5 1343 aa17.08■□□□□ 0.32
GAPVD1-214ENST00000469528 PER1O15534 1290 aaPredicted RBP17.08■□□□□ 0.32
GAPVD1-214ENST00000469528 CHRNA5P30532 468 aa17.08■□□□□ 0.32
GAPVD1-214ENST00000469528 NMRK2Q9NPI5 230 aa17.08■□□□□ 0.32
GAPVD1-214ENST00000469528 PDZRN3Q9UPQ7 1066 aa17.08■□□□□ 0.32
GAPVD1-214ENST00000469528 SERPINB2P05120 415 aa17.07■□□□□ 0.32
GAPVD1-214ENST00000469528 TEFQ10587 303 aa17.07■□□□□ 0.32
GAPVD1-214ENST00000469528 CC2D1BQ5T0F9 858 aaKnown RBP17.07■□□□□ 0.32
GAPVD1-214ENST00000469528 GAS2L2Q8NHY3 880 aa17.07■□□□□ 0.32
GAPVD1-214ENST00000469528 SCN11AQ9UI33 1791 aa17.07■□□□□ 0.32
GAPVD1-214ENST00000469528 ZC3H4Q9UPT8 1303 aaKnown RBP17.06■□□□□ 0.32
GAPVD1-214ENST00000469528 H0YIN7 160 aa17.06■□□□□ 0.32
GAPVD1-214ENST00000469528 NFIXQ14938 502 aa17.06■□□□□ 0.32
GAPVD1-214ENST00000469528 TTLL6Q8N841 843 aa17.06■□□□□ 0.32
GAPVD1-214ENST00000469528 COL15A1P39059 1388 aa17.05■□□□□ 0.32
GAPVD1-214ENST00000469528 KIAA1551Q9HCM1 1747 aa17.05■□□□□ 0.32
GAPVD1-214ENST00000469528 GNAT3A8MTJ3 354 aa17.05■□□□□ 0.32
GAPVD1-214ENST00000469528 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
GAPVD1-214ENST00000469528 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
GAPVD1-214ENST00000469528 RRAGCQ9HB90 399 aa17.04■□□□□ 0.32
GAPVD1-214ENST00000469528 ZBTB1Q9Y2K1 713 aa17.04■□□□□ 0.32
GAPVD1-214ENST00000469528 ARFGEF1Q9Y6D6 1849 aa17.04■□□□□ 0.32
GAPVD1-214ENST00000469528 LMNB1P20700 586 aa17.03■□□□□ 0.32
GAPVD1-214ENST00000469528 EIF5P55010 431 aaKnown RBP17.03■□□□□ 0.32
GAPVD1-214ENST00000469528 DNAJC5GQ8N7S2 189 aa17.03■□□□□ 0.32
GAPVD1-214ENST00000469528 PDE6BP35913 854 aa17.02■□□□□ 0.32
GAPVD1-214ENST00000469528 ZNF790Q6PG37 636 aa17.02■□□□□ 0.32
GAPVD1-214ENST00000469528 C2CD5Q86YS7 1000 aa17.02■□□□□ 0.32
GAPVD1-214ENST00000469528 CFAP53Q96M91 514 aa17.02■□□□□ 0.32
GAPVD1-214ENST00000469528 NPC1L1Q9UHC9 1359 aa17.02■□□□□ 0.31
GAPVD1-214ENST00000469528 TJP1Q07157 1748 aa17.01■□□□□ 0.31
GAPVD1-214ENST00000469528 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
GAPVD1-214ENST00000469528 VEGFAP15692 232 aaPredicted RBP17.01■□□□□ 0.31
GAPVD1-214ENST00000469528 DPY19L2Q6NUT2 758 aa17.01■□□□□ 0.31
GAPVD1-214ENST00000469528 SMC1BQ8NDV3 1235 aa17.01■□□□□ 0.31
GAPVD1-214ENST00000469528 FMNL2Q96PY5 1086 aa17.01■□□□□ 0.31
GAPVD1-214ENST00000469528 MRC1P22897 1456 aa17■□□□□ 0.31
GAPVD1-214ENST00000469528 GLTPD2A6NH11 291 aa17■□□□□ 0.31
GAPVD1-214ENST00000469528 NPHP1O15259 732 aa17■□□□□ 0.31
GAPVD1-214ENST00000469528 IL6STP40189 918 aaPredicted RBP17■□□□□ 0.31
GAPVD1-214ENST00000469528 BICDL1Q6ZP65 573 aa17■□□□□ 0.31
GAPVD1-214ENST00000469528 BRIP1Q9BX63 1249 aa17■□□□□ 0.31
GAPVD1-214ENST00000469528 BCL2L12Q9HB09 334 aa17■□□□□ 0.31
GAPVD1-214ENST00000469528 NUDCQ9Y266 331 aa17■□□□□ 0.31
GAPVD1-214ENST00000469528 IL17REQ8NFR9 667 aa16.99■□□□□ 0.31
GAPVD1-214ENST00000469528 ZNF496Q96IT1 587 aaPredicted RBP16.99■□□□□ 0.31
GAPVD1-214ENST00000469528 SETDB2Q96T68 719 aa16.99■□□□□ 0.31
GAPVD1-214ENST00000469528 ZNF622Q969S3 477 aaKnown RBP eCLIP16.98■□□□□ 0.31
GAPVD1-214ENST00000469528 HEG1Q9ULI3 1381 aa16.98■□□□□ 0.31
GAPVD1-214ENST00000469528 KCPQ6ZWJ8 1503 aa16.97■□□□□ 0.31
GAPVD1-214ENST00000469528 BTBD11A6QL63 1104 aa16.97■□□□□ 0.31
GAPVD1-214ENST00000469528 TBC1D2BQ9UPU7 963 aa16.97■□□□□ 0.31
GAPVD1-214ENST00000469528 ZNF330Q9Y3S2 320 aaPredicted RBP16.97■□□□□ 0.31
GAPVD1-214ENST00000469528 CNGB1Q14028 1251 aaPredicted RBP16.96■□□□□ 0.31
GAPVD1-214ENST00000469528 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
GAPVD1-214ENST00000469528 RTF1Q92541 710 aaKnown RBP16.96■□□□□ 0.31
GAPVD1-214ENST00000469528 KLRG1Q96E93 195 aa16.96■□□□□ 0.31
GAPVD1-214ENST00000469528 ADAMTS7Q9UKP4 1686 aa16.95■□□□□ 0.3
GAPVD1-214ENST00000469528 RASSF7Q02833 373 aa16.95■□□□□ 0.3
GAPVD1-214ENST00000469528 SOGA3Q5TF21 947 aa16.95■□□□□ 0.3
GAPVD1-214ENST00000469528 CNKSR1Q969H4 720 aa16.95■□□□□ 0.3
GAPVD1-214ENST00000469528 CARMIL3Q8ND23 1372 aa16.94■□□□□ 0.3
GAPVD1-214ENST00000469528 ST5P78524 1137 aa16.94■□□□□ 0.3
GAPVD1-214ENST00000469528 CLEC4GQ6UXB4 293 aa16.94■□□□□ 0.3
GAPVD1-214ENST00000469528 SBF1O95248 1867 aa16.93■□□□□ 0.3
GAPVD1-214ENST00000469528 JMYQ8N9B5 988 aa16.93■□□□□ 0.3
GAPVD1-214ENST00000469528 CNBD1Q8NA66 436 aa16.93■□□□□ 0.3
GAPVD1-214ENST00000469528 C21orf2O43822 256 aa16.92■□□□□ 0.3
GAPVD1-214ENST00000469528 A1BGP04217 495 aa16.92■□□□□ 0.3
GAPVD1-214ENST00000469528 PRKAR2BP31323 418 aa16.92■□□□□ 0.3
GAPVD1-214ENST00000469528 ERFEQ4G0M1 354 aa16.92■□□□□ 0.3
GAPVD1-214ENST00000469528 PRR5LQ6MZQ0 368 aa16.92■□□□□ 0.3
GAPVD1-214ENST00000469528 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
GAPVD1-214ENST00000469528 ZNF652Q9Y2D9 606 aa16.92■□□□□ 0.3
GAPVD1-214ENST00000469528 AFDNP55196 1824 aaKnown RBP16.91■□□□□ 0.3
GAPVD1-214ENST00000469528 CEMIPQ8WUJ3 1361 aa16.91■□□□□ 0.3
GAPVD1-214ENST00000469528 NRXN2Q9P2S2 1712 aa16.91■□□□□ 0.3
GAPVD1-214ENST00000469528 HTATSF1O43719 755 aaKnown RBP16.91■□□□□ 0.3
GAPVD1-214ENST00000469528 NEFMP07197 916 aa16.91■□□□□ 0.3
GAPVD1-214ENST00000469528 SNRPA1P09661 255 aaKnown RBP16.91■□□□□ 0.3
GAPVD1-214ENST00000469528 STYK1Q6J9G0 422 aa16.91■□□□□ 0.3
GAPVD1-214ENST00000469528 MASTLQ96GX5 879 aa16.91■□□□□ 0.3
GAPVD1-214ENST00000469528 VIRMAQ69YN4 1812 aaKnown RBP16.91■□□□□ 0.3
GAPVD1-214ENST00000469528 RGL2O15211 777 aa16.9■□□□□ 0.3
GAPVD1-214ENST00000469528 U2AF1L5P0DN76 240 aaPredicted RBP16.9■□□□□ 0.3
GAPVD1-214ENST00000469528 U2AF1Q01081 240 aaKnown RBP eCLIP16.9■□□□□ 0.3
GAPVD1-214ENST00000469528 TPTE2Q6XPS3 522 aa16.9■□□□□ 0.3
GAPVD1-214ENST00000469528 PHACTR3Q96KR7 559 aa16.9■□□□□ 0.3
GAPVD1-214ENST00000469528 TNRC6CQ9HCJ0 1690 aaKnown RBP16.9■□□□□ 0.3
GAPVD1-214ENST00000469528 NFKBIEO00221 500 aa16.89■□□□□ 0.29
GAPVD1-214ENST00000469528 CAMTA2O94983 1202 aa16.89■□□□□ 0.29
GAPVD1-214ENST00000469528 NBPF5PQ86XG9 351 aaPredicted RBP16.89■□□□□ 0.29
GAPVD1-214ENST00000469528 RSPH6AQ9H0K4 717 aa16.89■□□□□ 0.29
GAPVD1-214ENST00000469528 TAOK3Q9H2K8 898 aa16.89■□□□□ 0.29
GAPVD1-214ENST00000469528 ZNF219Q9P2Y4 722 aaPredicted RBP16.89■□□□□ 0.29
GAPVD1-214ENST00000469528 USP16Q9Y5T5 823 aa16.89■□□□□ 0.29
GAPVD1-214ENST00000469528 LTBP3Q9NS15 1303 aa16.89■□□□□ 0.29
GAPVD1-214ENST00000469528 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.29
GAPVD1-214ENST00000469528 SRGNP10124 158 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms