RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 A0A087WZG4 1122 aa14.69□□□□□ -0.06
COL4A3-204ENST00000469504 TM4SF1P30408 202 aa14.69□□□□□ -0.06
COL4A3-204ENST00000469504 PIM2Q9P1W9 311 aa14.69□□□□□ -0.06
COL4A3-204ENST00000469504 SRP68Q9UHB9 627 aaKnown RBP14.69□□□□□ -0.06
COL4A3-204ENST00000469504 BCS1LQ9Y276 419 aa14.69□□□□□ -0.06
COL4A3-204ENST00000469504 CEMIPQ8WUJ3 1361 aa14.69□□□□□ -0.06
COL4A3-204ENST00000469504 SENP3-EIF4A1A0A087X0R7 540 aa14.68□□□□□ -0.06
COL4A3-204ENST00000469504 A0A0G2JLW4 131 aa14.68□□□□□ -0.06
COL4A3-204ENST00000469504 POLRMTO00411 1230 aaKnown RBP14.68□□□□□ -0.06
COL4A3-204ENST00000469504 DPEP1P16444 411 aa14.68□□□□□ -0.06
COL4A3-204ENST00000469504 ZNF790Q6PG37 636 aa14.68□□□□□ -0.06
COL4A3-204ENST00000469504 KIAA1551Q9HCM1 1747 aa14.68□□□□□ -0.06
COL4A3-204ENST00000469504 FCHSD2O94868 740 aa14.67□□□□□ -0.06
COL4A3-204ENST00000469504 DDR1Q08345 913 aa14.67□□□□□ -0.06
COL4A3-204ENST00000469504 USPL1Q5W0Q7 1092 aa14.67□□□□□ -0.06
COL4A3-204ENST00000469504 IL17REQ8NFR9 667 aa14.67□□□□□ -0.06
COL4A3-204ENST00000469504 FMNL2Q96PY5 1086 aa14.67□□□□□ -0.06
COL4A3-204ENST00000469504 RSPH6AQ9H0K4 717 aa14.67□□□□□ -0.06
COL4A3-204ENST00000469504 ZBTB1Q9Y2K1 713 aa14.67□□□□□ -0.06
COL4A3-204ENST00000469504 HEG1Q9ULI3 1381 aa14.67□□□□□ -0.06
COL4A3-204ENST00000469504 UBR2Q8IWV8 1755 aa14.67□□□□□ -0.06
COL4A3-204ENST00000469504 PPP2R1AP30153 589 aa14.66□□□□□ -0.06
COL4A3-204ENST00000469504 PRKAR2BP31323 418 aa14.66□□□□□ -0.06
COL4A3-204ENST00000469504 HTATSF1O43719 755 aaKnown RBP14.65□□□□□ -0.06
COL4A3-204ENST00000469504 KCNA3P22001 575 aa14.65□□□□□ -0.06
COL4A3-204ENST00000469504 EIF5P55010 431 aaKnown RBP14.65□□□□□ -0.06
COL4A3-204ENST00000469504 CNGB1Q14028 1251 aaPredicted RBP14.65□□□□□ -0.06
COL4A3-204ENST00000469504 DALRD3Q5D0E6 543 aaKnown RBP14.65□□□□□ -0.06
COL4A3-204ENST00000469504 RTF1Q92541 710 aaKnown RBP14.65□□□□□ -0.06
COL4A3-204ENST00000469504 WWC3Q9ULE0 1092 aa14.65□□□□□ -0.06
COL4A3-204ENST00000469504 VIRMAQ69YN4 1812 aaKnown RBP14.64□□□□□ -0.07
COL4A3-204ENST00000469504 U2AF1L5P0DN76 240 aaPredicted RBP14.64□□□□□ -0.07
COL4A3-204ENST00000469504 IL6STP40189 918 aaPredicted RBP14.64□□□□□ -0.07
COL4A3-204ENST00000469504 U2AF1Q01081 240 aaKnown RBP eCLIP14.64□□□□□ -0.07
COL4A3-204ENST00000469504 NPM2Q86SE8 214 aaKnown RBP14.64□□□□□ -0.07
COL4A3-204ENST00000469504 ZNF496Q96IT1 587 aaPredicted RBP14.64□□□□□ -0.07
COL4A3-204ENST00000469504 PDZRN3Q9UPQ7 1066 aa14.64□□□□□ -0.07
COL4A3-204ENST00000469504 N4BP2Q86UW6 1770 aaPredicted RBP14.63□□□□□ -0.07
COL4A3-204ENST00000469504 BTBD11A6QL63 1104 aa14.63□□□□□ -0.07
COL4A3-204ENST00000469504 CANXP27824 592 aaKnown RBP14.63□□□□□ -0.07
COL4A3-204ENST00000469504 NFIXQ14938 502 aa14.63□□□□□ -0.07
COL4A3-204ENST00000469504 ARHGAP27Q6ZUM4 889 aa14.63□□□□□ -0.07
COL4A3-204ENST00000469504 PHACTR3Q96KR7 559 aa14.63□□□□□ -0.07
COL4A3-204ENST00000469504 NEFMP07197 916 aa14.62□□□□□ -0.07
COL4A3-204ENST00000469504 BRCA1P38398 1863 aaKnown RBP14.62□□□□□ -0.07
COL4A3-204ENST00000469504 BCL2L12Q9HB09 334 aa14.62□□□□□ -0.07
COL4A3-204ENST00000469504 NRXN2Q9P2S2 1712 aa14.61□□□□□ -0.07
COL4A3-204ENST00000469504 SIPA1L3O60292 1781 aaPredicted RBP14.61□□□□□ -0.07
COL4A3-204ENST00000469504 SERPINB2P05120 415 aa14.61□□□□□ -0.07
COL4A3-204ENST00000469504 ARFGEF1Q9Y6D6 1849 aa14.61□□□□□ -0.07
COL4A3-204ENST00000469504 RGL2O15211 777 aa14.6□□□□□ -0.07
COL4A3-204ENST00000469504 ZNF526Q8TF50 670 aaPredicted RBP14.6□□□□□ -0.07
COL4A3-204ENST00000469504 PNNQ9H307 717 aaKnown RBP14.6□□□□□ -0.07
COL4A3-204ENST00000469504 ZC3H4Q9UPT8 1303 aaKnown RBP14.6□□□□□ -0.07
COL4A3-204ENST00000469504 CARMIL3Q8ND23 1372 aa14.59□□□□□ -0.07
COL4A3-204ENST00000469504 KIF3CO14782 793 aa14.58□□□□□ -0.08
COL4A3-204ENST00000469504 SNRPA1P09661 255 aaKnown RBP14.58□□□□□ -0.08
COL4A3-204ENST00000469504 HSPA6P17066 643 aa14.58□□□□□ -0.08
COL4A3-204ENST00000469504 CHRNA5P30532 468 aa14.58□□□□□ -0.08
COL4A3-204ENST00000469504 H0YIN7 160 aa14.57□□□□□ -0.08
COL4A3-204ENST00000469504 PDE6BP35913 854 aa14.57□□□□□ -0.08
COL4A3-204ENST00000469504 C9orf131Q5VYM1 1079 aa14.57□□□□□ -0.08
COL4A3-204ENST00000469504 CLEC4GQ6UXB4 293 aa14.57□□□□□ -0.08
COL4A3-204ENST00000469504 TTLL6Q8N841 843 aa14.57□□□□□ -0.08
COL4A3-204ENST00000469504 PNISRQ8TF01 805 aaKnown RBP14.57□□□□□ -0.08
COL4A3-204ENST00000469504 SCN7AQ01118 1682 aa14.57□□□□□ -0.08
COL4A3-204ENST00000469504 TOMM70O94826 608 aa14.56□□□□□ -0.08
COL4A3-204ENST00000469504 TAF7Q15545 349 aaPredicted RBP14.56□□□□□ -0.08
COL4A3-204ENST00000469504 SETDB2Q96T68 719 aa14.56□□□□□ -0.08
COL4A3-204ENST00000469504 BRIP1Q9BX63 1249 aa14.56□□□□□ -0.08
COL4A3-204ENST00000469504 ZNF652Q9Y2D9 606 aa14.56□□□□□ -0.08
COL4A3-204ENST00000469504 KDM2BQ8NHM5 1336 aa14.56□□□□□ -0.08
COL4A3-204ENST00000469504 A1BGP04217 495 aa14.55□□□□□ -0.08
COL4A3-204ENST00000469504 TBC1D9BQ66K14 1250 aa14.55□□□□□ -0.08
COL4A3-204ENST00000469504 MCM10Q7L590 875 aa14.55□□□□□ -0.08
COL4A3-204ENST00000469504 C2CD5Q86YS7 1000 aa14.55□□□□□ -0.08
COL4A3-204ENST00000469504 RNF181Q9P0P0 153 aa14.55□□□□□ -0.08
COL4A3-204ENST00000469504 ZNF330Q9Y3S2 320 aaPredicted RBP14.55□□□□□ -0.08
COL4A3-204ENST00000469504 AFDNP55196 1824 aaKnown RBP14.55□□□□□ -0.08
COL4A3-204ENST00000469504 CAMTA2O94983 1202 aa14.54□□□□□ -0.08
COL4A3-204ENST00000469504 BICDL1Q6ZP65 573 aa14.54□□□□□ -0.08
COL4A3-204ENST00000469504 DZIP3Q86Y13 1208 aaKnown RBP14.54□□□□□ -0.08
COL4A3-204ENST00000469504 TBC1D2BQ9UPU7 963 aa14.54□□□□□ -0.08
COL4A3-204ENST00000469504 USP16Q9Y5T5 823 aa14.54□□□□□ -0.08
COL4A3-204ENST00000469504 DLEC1Q9Y238 1755 aa14.53□□□□□ -0.08
COL4A3-204ENST00000469504 KCNQ3O43525 872 aa14.53□□□□□ -0.08
COL4A3-204ENST00000469504 ST5P78524 1137 aa14.53□□□□□ -0.08
COL4A3-204ENST00000469504 RALBP1Q15311 655 aa14.53□□□□□ -0.08
COL4A3-204ENST00000469504 PRR5LQ6MZQ0 368 aa14.53□□□□□ -0.08
COL4A3-204ENST00000469504 CNBD1Q8NA66 436 aa14.53□□□□□ -0.08
COL4A3-204ENST00000469504 NPHP1O15259 732 aa14.52□□□□□ -0.09
COL4A3-204ENST00000469504 LMNB1P20700 586 aa14.52□□□□□ -0.09
COL4A3-204ENST00000469504 C16orf71Q8IYS4 520 aaPredicted RBP14.52□□□□□ -0.09
COL4A3-204ENST00000469504 RBM46Q8TBY0 533 aaKnown RBP14.52□□□□□ -0.09
COL4A3-204ENST00000469504 PLEKHF1Q96S99 279 aa14.52□□□□□ -0.09
COL4A3-204ENST00000469504 MAPK8IP3Q9UPT6 1336 aa14.51□□□□□ -0.09
COL4A3-204ENST00000469504 APLP1P51693 650 aa14.51□□□□□ -0.09
COL4A3-204ENST00000469504 NFE2L2Q16236 605 aa14.51□□□□□ -0.09
COL4A3-204ENST00000469504 SOGA3Q5TF21 947 aa14.51□□□□□ -0.09
COL4A3-204ENST00000469504 CNKSR1Q969H4 720 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms