RNA–Protein interactions for RNA: ENST00000469077.1

PTPN22-204, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 2

Gene PTPN22, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-204ENST00000469077 ESCO1Q5FWF5 840 aa6.36□□□□□ -1.39
PTPN22-204ENST00000469077 FAM182BQ5T319 152 aa6.36□□□□□ -1.39
PTPN22-204ENST00000469077 PPARGC1BQ86YN6 1023 aaKnown RBP6.36□□□□□ -1.39
PTPN22-204ENST00000469077 RHBDD1Q8TEB9 315 aa6.36□□□□□ -1.39
PTPN22-204ENST00000469077 ZCCHC2Q9C0B9 1178 aaKnown RBP6.36□□□□□ -1.39
PTPN22-204ENST00000469077 MYCP01106 439 aaPredicted RBP6.35□□□□□ -1.39
PTPN22-204ENST00000469077 NLRP8Q86W28 1048 aa6.35□□□□□ -1.39
PTPN22-204ENST00000469077 FCHSD1Q86WN1 690 aa6.35□□□□□ -1.39
PTPN22-204ENST00000469077 ZNF330Q9Y3S2 320 aaPredicted RBP6.35□□□□□ -1.39
PTPN22-204ENST00000469077 STAU1O95793 577 aaKnown RBP6.34□□□□□ -1.39
PTPN22-204ENST00000469077 ATP4AP20648 1035 aa6.34□□□□□ -1.39
PTPN22-204ENST00000469077 ETNK1Q9HBU6 452 aa6.34□□□□□ -1.39
PTPN22-204ENST00000469077 TPSG1Q9NRR2 321 aa6.34□□□□□ -1.39
PTPN22-204ENST00000469077 CEP126Q9P2H0 1117 aa6.34□□□□□ -1.39
PTPN22-204ENST00000469077 SPDYE3A6NKU9 549 aa6.33□□□□□ -1.4
PTPN22-204ENST00000469077 DYRK3O43781 588 aa6.33□□□□□ -1.4
PTPN22-204ENST00000469077 NBPF11Q86T75 865 aa6.33□□□□□ -1.4
PTPN22-204ENST00000469077 C1orf216Q8TAB5 229 aa6.33□□□□□ -1.4
PTPN22-204ENST00000469077 SOCS7O14512 581 aa6.32□□□□□ -1.4
PTPN22-204ENST00000469077 ATXN7O15265 892 aaPredicted RBP6.32□□□□□ -1.4
PTPN22-204ENST00000469077 MAPTP10636 758 aaKnown RBP6.32□□□□□ -1.4
PTPN22-204ENST00000469077 TNP2Q05952 138 aa6.32□□□□□ -1.4
PTPN22-204ENST00000469077 TBC1D9Q6ZT07 1266 aa6.32□□□□□ -1.4
PTPN22-204ENST00000469077 TSGA10IPQ3SY00 556 aa6.31□□□□□ -1.4
PTPN22-204ENST00000469077 PRRT3Q5FWE3 981 aa6.31□□□□□ -1.4
PTPN22-204ENST00000469077 PRSS36Q5K4E3 855 aa6.31□□□□□ -1.4
PTPN22-204ENST00000469077 ZNF468Q5VIY5 522 aaPredicted RBP6.31□□□□□ -1.4
PTPN22-204ENST00000469077 ZNF295-AS1Q8N0V1 137 aa6.31□□□□□ -1.4
PTPN22-204ENST00000469077 PCMTD1Q96MG8 357 aaPredicted RBP6.31□□□□□ -1.4
PTPN22-204ENST00000469077 APBA3O96018 575 aa6.3□□□□□ -1.4
PTPN22-204ENST00000469077 CD33P20138 364 aa6.3□□□□□ -1.4
PTPN22-204ENST00000469077 PLA2G4AP47712 749 aa6.3□□□□□ -1.4
PTPN22-204ENST00000469077 TLR1Q15399 786 aa6.3□□□□□ -1.4
PTPN22-204ENST00000469077 PHTF2Q8N3S3 785 aa6.3□□□□□ -1.4
PTPN22-204ENST00000469077 MTMR14Q8NCE2 650 aa6.29□□□□□ -1.4
PTPN22-204ENST00000469077 MDFIQ99750 246 aa6.29□□□□□ -1.4
PTPN22-204ENST00000469077 ELOA3CA0A087WX78 387 aaPredicted RBP6.28□□□□□ -1.4
PTPN22-204ENST00000469077 DCDC2BA2VCK2 349 aa6.28□□□□□ -1.4
PTPN22-204ENST00000469077 ELOA3DA6NLF2 546 aaPredicted RBP6.28□□□□□ -1.4
PTPN22-204ENST00000469077 ALAS2P22557 587 aa6.28□□□□□ -1.4
PTPN22-204ENST00000469077 SCNN1DP51172 638 aa6.28□□□□□ -1.4
PTPN22-204ENST00000469077 PCBP4P57723 403 aaKnown RBP6.28□□□□□ -1.4
PTPN22-204ENST00000469077 USP4Q13107 963 aa6.28□□□□□ -1.4
PTPN22-204ENST00000469077 ELOA3BQ3SY89 546 aa6.28□□□□□ -1.4
PTPN22-204ENST00000469077 ELOA3Q8NG57 546 aa6.28□□□□□ -1.4
PTPN22-204ENST00000469077 KRTAP4-9Q9BYQ8 210 aa6.28□□□□□ -1.4
PTPN22-204ENST00000469077 CHIC2Q9UKJ5 165 aa6.28□□□□□ -1.4
PTPN22-204ENST00000469077 PRR12Q9ULL5 1215 aa6.28□□□□□ -1.4
PTPN22-204ENST00000469077 NDUFB9Q9Y6M9 179 aa6.28□□□□□ -1.4
PTPN22-204ENST00000469077 A0A1W2PNR3 127 aa6.27□□□□□ -1.41
PTPN22-204ENST00000469077 KHNYNO15037 678 aaKnown RBP6.27□□□□□ -1.41
PTPN22-204ENST00000469077 BANK1Q8NDB2 785 aa6.27□□□□□ -1.41
PTPN22-204ENST00000469077 NACC1Q96RE7 527 aa6.27□□□□□ -1.41
PTPN22-204ENST00000469077 NIFKQ9BYG3 293 aaKnown RBP6.27□□□□□ -1.41
PTPN22-204ENST00000469077 INHAP05111 366 aa6.26□□□□□ -1.41
PTPN22-204ENST00000469077 FAM157BP0CG42 384 aa6.26□□□□□ -1.41
PTPN22-204ENST00000469077 COL9A3Q14050 684 aaPredicted RBP6.26□□□□□ -1.41
PTPN22-204ENST00000469077 LRP8Q14114 963 aa6.26□□□□□ -1.41
PTPN22-204ENST00000469077 AIDAQ96BJ3 306 aa6.26□□□□□ -1.41
PTPN22-204ENST00000469077 KRTAP4-2Q9BYR5 136 aa6.26□□□□□ -1.41
PTPN22-204ENST00000469077 PRDM6Q9NQX0 595 aa6.26□□□□□ -1.41
PTPN22-204ENST00000469077 EFSO43281 561 aa6.25□□□□□ -1.41
PTPN22-204ENST00000469077 H2AFB1P0C5Y9 115 aa6.25□□□□□ -1.41
PTPN22-204ENST00000469077 H2AFB2P0C5Z0 115 aa6.25□□□□□ -1.41
PTPN22-204ENST00000469077 LAMC2Q13753 1193 aa6.25□□□□□ -1.41
PTPN22-204ENST00000469077 ARSJQ5FYB0 599 aaPredicted RBP6.25□□□□□ -1.41
PTPN22-204ENST00000469077 ZIC5Q96T25 663 aa6.25□□□□□ -1.41
PTPN22-204ENST00000469077 STRN4Q9NRL3 753 aa6.25□□□□□ -1.41
PTPN22-204ENST00000469077 MARK1Q9P0L2 795 aa6.25□□□□□ -1.41
PTPN22-204ENST00000469077 IQSEC3Q9UPP2 1182 aaPredicted RBP6.25□□□□□ -1.41
PTPN22-204ENST00000469077 DOLKQ9UPQ8 538 aa6.25□□□□□ -1.41
PTPN22-204ENST00000469077 HYAL3O43820 417 aaPredicted RBP6.24□□□□□ -1.41
PTPN22-204ENST00000469077 GDF10P55107 478 aa6.24□□□□□ -1.41
PTPN22-204ENST00000469077 TRIM28Q13263 835 aaKnown RBP6.24□□□□□ -1.41
PTPN22-204ENST00000469077 NBPF1Q3BBV0 1214 aa6.24□□□□□ -1.41
PTPN22-204ENST00000469077 SAMD5Q5TGI4 173 aa6.24□□□□□ -1.41
PTPN22-204ENST00000469077 ADARB2-AS1A8MUL3 147 aa6.23□□□□□ -1.41
PTPN22-204ENST00000469077 SMTNP53814 917 aa6.23□□□□□ -1.41
PTPN22-204ENST00000469077 SIRT1Q96EB6 747 aa6.23□□□□□ -1.41
PTPN22-204ENST00000469077 SNRKQ9NRH2 765 aa6.23□□□□□ -1.41
PTPN22-204ENST00000469077 ZDHHC3Q9NYG2 299 aa6.23□□□□□ -1.41
PTPN22-204ENST00000469077 C9orf172C9J069 976 aa6.22□□□□□ -1.41
PTPN22-204ENST00000469077 M0R082 166 aa6.22□□□□□ -1.41
PTPN22-204ENST00000469077 SIN3BO75182 1162 aa6.22□□□□□ -1.41
PTPN22-204ENST00000469077 TATP17735 454 aaPredicted RBP6.22□□□□□ -1.41
PTPN22-204ENST00000469077 MTFR1Q15390 333 aa6.22□□□□□ -1.41
PTPN22-204ENST00000469077 SYT9Q86SS6 491 aa6.22□□□□□ -1.41
PTPN22-204ENST00000469077 ZNF417Q8TAU3 575 aa6.22□□□□□ -1.41
PTPN22-204ENST00000469077 SLC4A9Q96Q91 983 aa6.22□□□□□ -1.41
PTPN22-204ENST00000469077 ZNF587Q96SQ5 575 aaPredicted RBP6.22□□□□□ -1.41
PTPN22-204ENST00000469077 USP3Q9Y6I4 520 aa6.22□□□□□ -1.41
PTPN22-204ENST00000469077 FAM229AH3BQW9 127 aa6.21□□□□□ -1.42
PTPN22-204ENST00000469077 GRIK4Q16099 956 aa6.21□□□□□ -1.42
PTPN22-204ENST00000469077 OXLD1Q5BKU9 147 aa6.21□□□□□ -1.42
PTPN22-204ENST00000469077 STARD13Q9Y3M8 1113 aa6.21□□□□□ -1.42
PTPN22-204ENST00000469077 GJA3Q9Y6H8 435 aa6.21□□□□□ -1.42
PTPN22-204ENST00000469077 ARID1BQ8NFD5 2236 aaPredicted RBP6.21□□□□□ -1.42
PTPN22-204ENST00000469077 TMEM229AB2RXF0 380 aa6.2□□□□□ -1.42
PTPN22-204ENST00000469077 CDK2AP1O14519 115 aa6.2□□□□□ -1.42
PTPN22-204ENST00000469077 ADGRE1Q14246 886 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms