RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 HSP90AB2PQ58FF8 381 aa16.19■□□□□ 0.18
ARHGEF39-202ENST00000468876 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
ARHGEF39-202ENST00000468876 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
ARHGEF39-202ENST00000468876 TIMELESSQ9UNS1 1208 aa16.19■□□□□ 0.18
ARHGEF39-202ENST00000468876 SMG6Q86US8 1419 aaKnown RBP16.19■□□□□ 0.18
ARHGEF39-202ENST00000468876 INSRP06213 1382 aa16.18■□□□□ 0.18
ARHGEF39-202ENST00000468876 IQCA1LA6NCM1 817 aa16.18■□□□□ 0.18
ARHGEF39-202ENST00000468876 RPS6KA4O75676 772 aa16.18■□□□□ 0.18
ARHGEF39-202ENST00000468876 ITGBL1O95965 494 aaPredicted RBP16.18■□□□□ 0.18
ARHGEF39-202ENST00000468876 SOX10P56693 466 aa16.18■□□□□ 0.18
ARHGEF39-202ENST00000468876 CDCA8Q53HL2 280 aa16.18■□□□□ 0.18
ARHGEF39-202ENST00000468876 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
ARHGEF39-202ENST00000468876 EMILIN1Q9Y6C2 1016 aa16.18■□□□□ 0.18
ARHGEF39-202ENST00000468876 TNRC18O15417 2968 aaPredicted RBP16.17■□□□□ 0.18
ARHGEF39-202ENST00000468876 RC3H1Q5TC82 1133 aaKnown RBP16.17■□□□□ 0.18
ARHGEF39-202ENST00000468876 ATG3Q9NT62 314 aa16.16■□□□□ 0.18
ARHGEF39-202ENST00000468876 ECE1P42892 770 aa16.15■□□□□ 0.18
ARHGEF39-202ENST00000468876 NCAPD2Q15021 1401 aa16.15■□□□□ 0.18
ARHGEF39-202ENST00000468876 CAPNS2Q96L46 248 aa16.15■□□□□ 0.18
ARHGEF39-202ENST00000468876 GPR101Q96P66 508 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF39-202ENST00000468876 POLR3GLQ9BT43 218 aa16.15■□□□□ 0.18
ARHGEF39-202ENST00000468876 TAF1DQ9H5J8 278 aaPredicted RBP16.15■□□□□ 0.18
ARHGEF39-202ENST00000468876 CCDC88AQ3V6T2 1871 aa16.14■□□□□ 0.17
ARHGEF39-202ENST00000468876 POLRMTO00411 1230 aaKnown RBP16.14■□□□□ 0.17
ARHGEF39-202ENST00000468876 HSPA5P11021 654 aaKnown RBP16.14■□□□□ 0.17
ARHGEF39-202ENST00000468876 CNTNAP4Q9C0A0 1308 aa16.14■□□□□ 0.17
ARHGEF39-202ENST00000468876 KIF24Q5T7B8 1368 aa16.13■□□□□ 0.17
ARHGEF39-202ENST00000468876 NKX1-1Q15270 411 aaPredicted RBP16.13■□□□□ 0.17
ARHGEF39-202ENST00000468876 C2CD5Q86YS7 1000 aa16.13■□□□□ 0.17
ARHGEF39-202ENST00000468876 CCER1Q8TC90 406 aaPredicted RBP16.12■□□□□ 0.17
ARHGEF39-202ENST00000468876 SPG7Q9UQ90 795 aa16.12■□□□□ 0.17
ARHGEF39-202ENST00000468876 USP42Q9H9J4 1324 aaKnown RBP16.12■□□□□ 0.17
ARHGEF39-202ENST00000468876 MAP1SQ66K74 1059 aaPredicted RBP16.11■□□□□ 0.17
ARHGEF39-202ENST00000468876 CYP4F22Q6NT55 531 aa16.11■□□□□ 0.17
ARHGEF39-202ENST00000468876 CNTROBQ8N137 903 aa16.11■□□□□ 0.17
ARHGEF39-202ENST00000468876 SLC4A9Q96Q91 983 aa16.11■□□□□ 0.17
ARHGEF39-202ENST00000468876 KDRP35968 1356 aa16.11■□□□□ 0.17
ARHGEF39-202ENST00000468876 H0YIN7 160 aa16.1■□□□□ 0.17
ARHGEF39-202ENST00000468876 GCC1Q96CN9 775 aa16.1■□□□□ 0.17
ARHGEF39-202ENST00000468876 PPM1GO15355 546 aaPredicted RBP16.09■□□□□ 0.17
ARHGEF39-202ENST00000468876 C21orf2O43822 256 aa16.09■□□□□ 0.17
ARHGEF39-202ENST00000468876 CA12O43570 354 aa16.08■□□□□ 0.16
ARHGEF39-202ENST00000468876 AOC2O75106 756 aa16.08■□□□□ 0.16
ARHGEF39-202ENST00000468876 TM4SF1P30408 202 aa16.08■□□□□ 0.16
ARHGEF39-202ENST00000468876 EIF4G2P78344 907 aaKnown RBP eCLIP16.08■□□□□ 0.16
ARHGEF39-202ENST00000468876 ZNF622Q969S3 477 aaKnown RBP eCLIP16.08■□□□□ 0.16
ARHGEF39-202ENST00000468876 TAOK3Q9H2K8 898 aa16.08■□□□□ 0.16
ARHGEF39-202ENST00000468876 HACL1Q9UJ83 578 aa16.08■□□□□ 0.16
ARHGEF39-202ENST00000468876 ZPR1O75312 459 aa16.07■□□□□ 0.16
ARHGEF39-202ENST00000468876 TNNT2P45379 298 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF39-202ENST00000468876 L3MBTL3Q96JM7 780 aaPredicted RBP16.07■□□□□ 0.16
ARHGEF39-202ENST00000468876 EPHX2P34913 555 aa16.06■□□□□ 0.16
ARHGEF39-202ENST00000468876 CRKLP46109 303 aaKnown RBP16.06■□□□□ 0.16
ARHGEF39-202ENST00000468876 POLKQ9UBT6 870 aa16.06■□□□□ 0.16
ARHGEF39-202ENST00000468876 WASHC2AQ641Q2 1341 aa16.05■□□□□ 0.16
ARHGEF39-202ENST00000468876 DDX21Q9NR30 783 aaKnown RBP eCLIP16.05■□□□□ 0.16
ARHGEF39-202ENST00000468876 THSD7BQ9C0I4 1608 aa16.05■□□□□ 0.16
ARHGEF39-202ENST00000468876 CASP8AP2Q9UKL3 1982 aa16.04■□□□□ 0.16
ARHGEF39-202ENST00000468876 MAP2K2P36507 400 aa16.04■□□□□ 0.16
ARHGEF39-202ENST00000468876 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
ARHGEF39-202ENST00000468876 PNMA8AQ86V59 439 aaPredicted RBP16.04■□□□□ 0.16
ARHGEF39-202ENST00000468876 IFNL2Q8IZJ0 200 aa16.04■□□□□ 0.16
ARHGEF39-202ENST00000468876 NBPF15Q8N660 670 aa16.04■□□□□ 0.16
ARHGEF39-202ENST00000468876 PANK3Q9H999 370 aa16.04■□□□□ 0.16
ARHGEF39-202ENST00000468876 LTBP1Q14766 1721 aa16.04■□□□□ 0.16
ARHGEF39-202ENST00000468876 SERPINB2P05120 415 aa16.03■□□□□ 0.16
ARHGEF39-202ENST00000468876 EIF4A2Q14240 407 aaKnown RBP16.03■□□□□ 0.16
ARHGEF39-202ENST00000468876 HABP4Q5JVS0 413 aaKnown RBP16.03■□□□□ 0.16
ARHGEF39-202ENST00000468876 EYA1Q99502 592 aa16.03■□□□□ 0.16
ARHGEF39-202ENST00000468876 DICER1Q9UPY3 1922 aaKnown RBP16.02■□□□□ 0.16
ARHGEF39-202ENST00000468876 PTCD1O75127 700 aaKnown RBP16.02■□□□□ 0.16
ARHGEF39-202ENST00000468876 PHKG2P15735 406 aa16.02■□□□□ 0.16
ARHGEF39-202ENST00000468876 NFIXQ14938 502 aa16.02■□□□□ 0.16
ARHGEF39-202ENST00000468876 SCN4AP35499 1836 aa16.02■□□□□ 0.16
ARHGEF39-202ENST00000468876 LTBP3Q9NS15 1303 aa16.01■□□□□ 0.15
ARHGEF39-202ENST00000468876 COL5A3P25940 1745 aaPredicted RBP16.01■□□□□ 0.15
ARHGEF39-202ENST00000468876 DLEC1Q9Y238 1755 aa16■□□□□ 0.15
ARHGEF39-202ENST00000468876 FMR1Q06787 632 aaKnown RBP eCLIP16■□□□□ 0.15
ARHGEF39-202ENST00000468876 KIF7Q2M1P5 1343 aa15.99■□□□□ 0.15
ARHGEF39-202ENST00000468876 RNF123Q5XPI4 1314 aa15.99■□□□□ 0.15
ARHGEF39-202ENST00000468876 CARMIL3Q8ND23 1372 aa15.99■□□□□ 0.15
ARHGEF39-202ENST00000468876 MYH14Q7Z406 1995 aaKnown RBP15.98■□□□□ 0.15
ARHGEF39-202ENST00000468876 ZNF541Q9H0D2 1346 aa15.98■□□□□ 0.15
ARHGEF39-202ENST00000468876 BRPF1P55201 1214 aaPredicted RBP15.98■□□□□ 0.15
ARHGEF39-202ENST00000468876 TLL2Q9Y6L7 1015 aa15.98■□□□□ 0.15
ARHGEF39-202ENST00000468876 DLL1O00548 723 aa15.97■□□□□ 0.15
ARHGEF39-202ENST00000468876 CIAPIN1Q6FI81 312 aa15.97■□□□□ 0.15
ARHGEF39-202ENST00000468876 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.97■□□□□ 0.15
ARHGEF39-202ENST00000468876 ZNF831Q5JPB2 1677 aa15.97■□□□□ 0.15
ARHGEF39-202ENST00000468876 ADAMTSL1Q8N6G6 1762 aa15.96■□□□□ 0.15
ARHGEF39-202ENST00000468876 ERVV-2B6SEH9 535 aa15.96■□□□□ 0.15
ARHGEF39-202ENST00000468876 CABP4P57796 275 aa15.96■□□□□ 0.15
ARHGEF39-202ENST00000468876 BICDL1Q6ZP65 573 aa15.96■□□□□ 0.15
ARHGEF39-202ENST00000468876 AEBP1Q8IUX7 1158 aa15.96■□□□□ 0.15
ARHGEF39-202ENST00000468876 FER1L6Q2WGJ9 1857 aa15.96■□□□□ 0.15
ARHGEF39-202ENST00000468876 AFDNP55196 1824 aaKnown RBP15.96■□□□□ 0.14
ARHGEF39-202ENST00000468876 PDE6BP35913 854 aa15.95■□□□□ 0.14
ARHGEF39-202ENST00000468876 SOGA3Q5TF21 947 aa15.95■□□□□ 0.14
ARHGEF39-202ENST00000468876 TRAF5O00463 557 aa15.94■□□□□ 0.14
ARHGEF39-202ENST00000468876 CST9Q5W186 159 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms