RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 NBPF1Q3BBV0 1214 aa9.87□□□□□ -0.83
LSM5-209ENST00000468872 NDFIP2Q9NV92 336 aa9.87□□□□□ -0.83
LSM5-209ENST00000468872 ATXN7L1Q9ULK2 861 aaPredicted RBP9.87□□□□□ -0.83
LSM5-209ENST00000468872 RNF225M0QZC1 329 aaPredicted RBP9.86□□□□□ -0.83
LSM5-209ENST00000468872 BCRP11274 1271 aa9.86□□□□□ -0.83
LSM5-209ENST00000468872 EPHA4P54764 986 aa9.86□□□□□ -0.83
LSM5-209ENST00000468872 FOXK2Q01167 660 aa9.86□□□□□ -0.83
LSM5-209ENST00000468872 TPCN2Q8NHX9 752 aa9.86□□□□□ -0.83
LSM5-209ENST00000468872 ABHD17AQ96GS6 310 aa9.86□□□□□ -0.83
LSM5-209ENST00000468872 ENAMQ9NRM1 1142 aa9.86□□□□□ -0.83
LSM5-209ENST00000468872 DNAAF2Q9NVR5 837 aaKnown RBP9.86□□□□□ -0.83
LSM5-209ENST00000468872 BNIP3LO60238 219 aa9.85□□□□□ -0.83
LSM5-209ENST00000468872 MAP2K3P46734 347 aa9.85□□□□□ -0.83
LSM5-209ENST00000468872 MARSP56192 900 aaKnown RBP9.85□□□□□ -0.83
LSM5-209ENST00000468872 NLRP8Q86W28 1048 aa9.85□□□□□ -0.83
LSM5-209ENST00000468872 ZDHHC3Q9NYG2 299 aa9.85□□□□□ -0.83
LSM5-209ENST00000468872 MKRN1Q9UHC7 482 aaKnown RBP9.85□□□□□ -0.83
LSM5-209ENST00000468872 PARP3Q9Y6F1 533 aa9.85□□□□□ -0.83
LSM5-209ENST00000468872 TATP17735 454 aaPredicted RBP9.84□□□□□ -0.83
LSM5-209ENST00000468872 ARSJQ5FYB0 599 aaPredicted RBP9.84□□□□□ -0.83
LSM5-209ENST00000468872 CCDC102BQ68D86 513 aa9.84□□□□□ -0.83
LSM5-209ENST00000468872 FIGNL1Q6PIW4 674 aa9.84□□□□□ -0.83
LSM5-209ENST00000468872 TNS4Q8IZW8 715 aa9.84□□□□□ -0.83
LSM5-209ENST00000468872 OGFOD1Q8N543 542 aa9.84□□□□□ -0.83
LSM5-209ENST00000468872 ZDHHC1Q8WTX9 485 aa9.84□□□□□ -0.83
LSM5-209ENST00000468872 ZCCHC2Q9C0B9 1178 aaKnown RBP9.84□□□□□ -0.83
LSM5-209ENST00000468872 TFIP11Q9UBB9 837 aaKnown RBP9.84□□□□□ -0.83
LSM5-209ENST00000468872 A0A1W2PNR3 127 aa9.83□□□□□ -0.84
LSM5-209ENST00000468872 FGFR3P22607 806 aa9.83□□□□□ -0.84
LSM5-209ENST00000468872 TBCELQ5QJ74 424 aa9.83□□□□□ -0.84
LSM5-209ENST00000468872 HOMEZQ8IX15 550 aa9.83□□□□□ -0.84
LSM5-209ENST00000468872 LARGE2Q8N3Y3 721 aa9.83□□□□□ -0.84
LSM5-209ENST00000468872 KLRG1Q96E93 195 aa9.83□□□□□ -0.84
LSM5-209ENST00000468872 OXCT2Q9BYC2 517 aaPredicted RBP9.83□□□□□ -0.84
LSM5-209ENST00000468872 LRRC4BQ9NT99 713 aa9.83□□□□□ -0.84
LSM5-209ENST00000468872 PCDHGC4Q9Y5F7 938 aa9.83□□□□□ -0.84
LSM5-209ENST00000468872 PALM3A6NDB9 673 aaPredicted RBP9.82□□□□□ -0.84
LSM5-209ENST00000468872 RASSF7Q02833 373 aa9.82□□□□□ -0.84
LSM5-209ENST00000468872 TEAD4Q15561 434 aa9.82□□□□□ -0.84
LSM5-209ENST00000468872 SLC9A9Q8IVB4 645 aa9.82□□□□□ -0.84
LSM5-209ENST00000468872 L3MBTL2Q969R5 705 aa9.82□□□□□ -0.84
LSM5-209ENST00000468872 CALR3Q96L12 384 aaKnown RBP9.82□□□□□ -0.84
LSM5-209ENST00000468872 MAFBQ9Y5Q3 323 aaPredicted RBP9.82□□□□□ -0.84
LSM5-209ENST00000468872 C2CD2LO14523 706 aa9.81□□□□□ -0.84
LSM5-209ENST00000468872 OIP5O43482 229 aa9.81□□□□□ -0.84
LSM5-209ENST00000468872 TXLNAP40222 546 aa9.81□□□□□ -0.84
LSM5-209ENST00000468872 CTBSQ01459 385 aa9.81□□□□□ -0.84
LSM5-209ENST00000468872 SIX5Q8N196 739 aa9.81□□□□□ -0.84
LSM5-209ENST00000468872 SCARF2Q96GP6 870 aaPredicted RBP9.81□□□□□ -0.84
LSM5-209ENST00000468872 ZIC5Q96T25 663 aa9.81□□□□□ -0.84
LSM5-209ENST00000468872 ARID3AQ99856 593 aa9.81□□□□□ -0.84
LSM5-209ENST00000468872 ZNF777Q9ULD5 760 aaPredicted RBP9.81□□□□□ -0.84
LSM5-209ENST00000468872 ATXN7O15265 892 aaPredicted RBP9.8□□□□□ -0.84
LSM5-209ENST00000468872 BMP4P12644 408 aa9.8□□□□□ -0.84
LSM5-209ENST00000468872 NOS2P35228 1153 aa9.8□□□□□ -0.84
LSM5-209ENST00000468872 IRS1P35568 1242 aa9.8□□□□□ -0.84
LSM5-209ENST00000468872 NEDD1Q8NHV4 660 aa9.8□□□□□ -0.84
LSM5-209ENST00000468872 ZNF594Q96JF6 807 aaPredicted RBP9.8□□□□□ -0.84
LSM5-209ENST00000468872 M0R2N6 131 aa9.79□□□□□ -0.84
LSM5-209ENST00000468872 GDF11O95390 407 aa9.79□□□□□ -0.84
LSM5-209ENST00000468872 BICDL1Q6ZP65 573 aa9.79□□□□□ -0.84
LSM5-209ENST00000468872 TMEM151AQ8N4L1 468 aa9.79□□□□□ -0.84
LSM5-209ENST00000468872 DCDC2BA2VCK2 349 aa9.78□□□□□ -0.84
LSM5-209ENST00000468872 DKK1O94907 266 aa9.78□□□□□ -0.84
LSM5-209ENST00000468872 RASA1P20936 1047 aa9.78□□□□□ -0.84
LSM5-209ENST00000468872 TNP2Q05952 138 aa9.78□□□□□ -0.84
LSM5-209ENST00000468872 PPP1R12CQ9BZL4 782 aa9.78□□□□□ -0.84
LSM5-209ENST00000468872 TSPAN10Q9H1Z9 355 aaPredicted RBP9.78□□□□□ -0.84
LSM5-209ENST00000468872 GDF2Q9UK05 429 aaPredicted RBP9.78□□□□□ -0.84
LSM5-209ENST00000468872 HCN2Q9UL51 889 aa9.78□□□□□ -0.84
LSM5-209ENST00000468872 ZNF232Q9UNY5 417 aa9.78□□□□□ -0.84
LSM5-209ENST00000468872 SERTM1A2A2V5 107 aa9.77□□□□□ -0.85
LSM5-209ENST00000468872 SFI1A8K8P3 1242 aa9.77□□□□□ -0.85
LSM5-209ENST00000468872 MAPTP10636 758 aaKnown RBP9.77□□□□□ -0.85
LSM5-209ENST00000468872 SH3PXD2AQ5TCZ1 1133 aa9.77□□□□□ -0.85
LSM5-209ENST00000468872 C1orf229Q6ZS94 237 aaPredicted RBP9.77□□□□□ -0.85
LSM5-209ENST00000468872 CCDC82Q8N4S0 544 aa9.77□□□□□ -0.85
LSM5-209ENST00000468872 TSEN2Q8NCE0 465 aaKnown RBP9.77□□□□□ -0.85
LSM5-209ENST00000468872 GJA3Q9Y6H8 435 aa9.77□□□□□ -0.85
LSM5-209ENST00000468872 EML1O00423 815 aa9.76□□□□□ -0.85
LSM5-209ENST00000468872 PSMA6P60900 246 aaKnown RBP9.76□□□□□ -0.85
LSM5-209ENST00000468872 KANK3Q6NY19 840 aa9.76□□□□□ -0.85
LSM5-209ENST00000468872 GOLGA6L1Q8N7Z2 621 aa9.76□□□□□ -0.85
LSM5-209ENST00000468872 GALNT6Q8NCL4 622 aa9.76□□□□□ -0.85
LSM5-209ENST00000468872 RBM19Q9Y4C8 960 aaKnown RBP9.76□□□□□ -0.85
LSM5-209ENST00000468872 CNTNAP5Q8WYK1 1306 aa9.76□□□□□ -0.85
LSM5-209ENST00000468872 SHISA8B8ZZ34 492 aa9.75□□□□□ -0.85
LSM5-209ENST00000468872 KHNYNO15037 678 aaKnown RBP9.75□□□□□ -0.85
LSM5-209ENST00000468872 FAM157BP0CG42 384 aa9.75□□□□□ -0.85
LSM5-209ENST00000468872 CD33P20138 364 aa9.75□□□□□ -0.85
LSM5-209ENST00000468872 SAMD5Q5TGI4 173 aa9.75□□□□□ -0.85
LSM5-209ENST00000468872 KCTD17Q8N5Z5 321 aa9.75□□□□□ -0.85
LSM5-209ENST00000468872 GGA1Q9UJY5 639 aa9.75□□□□□ -0.85
LSM5-209ENST00000468872 KANK4Q5T7N3 995 aaPredicted RBP9.74□□□□□ -0.85
LSM5-209ENST00000468872 SLCO4C1Q6ZQN7 724 aa9.74□□□□□ -0.85
LSM5-209ENST00000468872 BEND7Q8N7W2 519 aaPredicted RBP9.74□□□□□ -0.85
LSM5-209ENST00000468872 C7orf43Q8WVR3 580 aa9.74□□□□□ -0.85
LSM5-209ENST00000468872 EDARADDQ8WWZ3 215 aa9.74□□□□□ -0.85
LSM5-209ENST00000468872 ARAFP10398 606 aa9.73□□□□□ -0.85
LSM5-209ENST00000468872 HIRAP54198 1017 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms