RNA–Protein interactions for RNA: ENST00000468621.5

SND1-207, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-207ENST00000468621 AMIGO3Q86WK7 504 aa7.07□□□□□ -1.28
SND1-207ENST00000468621 SKAP1Q86WV1 359 aa7.07□□□□□ -1.28
SND1-207ENST00000468621 NFATC2IPQ8NCF5 419 aa7.07□□□□□ -1.28
SND1-207ENST00000468621 SMARCC1Q92922 1105 aaPredicted RBP7.07□□□□□ -1.28
SND1-207ENST00000468621 PHACTR3Q96KR7 559 aa7.07□□□□□ -1.28
SND1-207ENST00000468621 SLC4A9Q96Q91 983 aa7.07□□□□□ -1.28
SND1-207ENST00000468621 LGR6Q9HBX8 967 aa7.07□□□□□ -1.28
SND1-207ENST00000468621 MAP3K5Q99683 1374 aa7.07□□□□□ -1.28
SND1-207ENST00000468621 RNMTO43148 476 aaKnown RBP7.06□□□□□ -1.28
SND1-207ENST00000468621 ZBTB7AO95365 584 aa7.06□□□□□ -1.28
SND1-207ENST00000468621 U2AF1L5P0DN76 240 aaPredicted RBP7.06□□□□□ -1.28
SND1-207ENST00000468621 CANXP27824 592 aaKnown RBP7.06□□□□□ -1.28
SND1-207ENST00000468621 PTGER2P43116 358 aa7.06□□□□□ -1.28
SND1-207ENST00000468621 CABP4P57796 275 aa7.06□□□□□ -1.28
SND1-207ENST00000468621 U2AF1Q01081 240 aaKnown RBP eCLIP7.06□□□□□ -1.28
SND1-207ENST00000468621 ITPK1Q13572 414 aa7.06□□□□□ -1.28
SND1-207ENST00000468621 PDE3AQ14432 1141 aa7.06□□□□□ -1.28
SND1-207ENST00000468621 LINC00116Q8NCU8 138 aa7.06□□□□□ -1.28
SND1-207ENST00000468621 SGIP1Q9BQI5 828 aa7.06□□□□□ -1.28
SND1-207ENST00000468621 SLC52A2Q9HAB3 445 aa7.06□□□□□ -1.28
SND1-207ENST00000468621 TFCP2L1Q9NZI6 479 aa7.06□□□□□ -1.28
SND1-207ENST00000468621 CEMIPQ8WUJ3 1361 aa7.06□□□□□ -1.28
SND1-207ENST00000468621 N4BP2Q86UW6 1770 aaPredicted RBP7.05□□□□□ -1.28
SND1-207ENST00000468621 KIAA1551Q9HCM1 1747 aa7.05□□□□□ -1.28
SND1-207ENST00000468621 GIGYF1O75420 1035 aaPredicted RBP7.05□□□□□ -1.28
SND1-207ENST00000468621 FCHSD2O94868 740 aa7.05□□□□□ -1.28
SND1-207ENST00000468621 SLC4A3P48751 1232 aa7.05□□□□□ -1.28
SND1-207ENST00000468621 AAMPQ13685 434 aa7.05□□□□□ -1.28
SND1-207ENST00000468621 BECN1Q14457 450 aa7.05□□□□□ -1.28
SND1-207ENST00000468621 GAS2L2Q8NHY3 880 aa7.05□□□□□ -1.28
SND1-207ENST00000468621 MTFR1LQ9H019 292 aa7.05□□□□□ -1.28
SND1-207ENST00000468621 ATF5Q9Y2D1 282 aaPredicted RBP7.05□□□□□ -1.28
SND1-207ENST00000468621 NUP98P52948 1817 aa7.05□□□□□ -1.28
SND1-207ENST00000468621 BCORQ6W2J9 1755 aa7.05□□□□□ -1.28
SND1-207ENST00000468621 MAPK8IP3Q9UPT6 1336 aa7.04□□□□□ -1.28
SND1-207ENST00000468621 GNAT3A8MTJ3 354 aa7.04□□□□□ -1.28
SND1-207ENST00000468621 BCAR3O75815 825 aa7.04□□□□□ -1.28
SND1-207ENST00000468621 SLC34A2O95436 690 aa7.04□□□□□ -1.28
SND1-207ENST00000468621 ATP6V1AP38606 617 aa7.04□□□□□ -1.28
SND1-207ENST00000468621 SMIM5Q71RC9 77 aa7.04□□□□□ -1.28
SND1-207ENST00000468621 COL23A1Q86Y22 540 aaPredicted RBP7.04□□□□□ -1.28
SND1-207ENST00000468621 IL27Q8NEV9 243 aa7.04□□□□□ -1.28
SND1-207ENST00000468621 IL17REQ8NFR9 667 aa7.04□□□□□ -1.28
SND1-207ENST00000468621 PLEKHF1Q96S99 279 aa7.04□□□□□ -1.28
SND1-207ENST00000468621 SCN7AQ01118 1682 aa7.03□□□□□ -1.28
SND1-207ENST00000468621 CACNA1SQ13698 1873 aa7.03□□□□□ -1.28
SND1-207ENST00000468621 CACNA1FO60840 1977 aa7.03□□□□□ -1.28
SND1-207ENST00000468621 PTCD1O75127 700 aaKnown RBP7.03□□□□□ -1.28
SND1-207ENST00000468621 SLC39A6Q13433 755 aa7.03□□□□□ -1.28
SND1-207ENST00000468621 SLC16A10Q8TF71 515 aa7.03□□□□□ -1.28
SND1-207ENST00000468621 AK7Q96M32 723 aa7.03□□□□□ -1.28
SND1-207ENST00000468621 RBM42Q9BTD8 480 aaKnown RBP7.03□□□□□ -1.28
SND1-207ENST00000468621 CCDC88AQ3V6T2 1871 aa7.02□□□□□ -1.28
SND1-207ENST00000468621 NRXN2Q9P2S2 1712 aa7.02□□□□□ -1.29
SND1-207ENST00000468621 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.02□□□□□ -1.29
SND1-207ENST00000468621 GNPATO15228 680 aa7.02□□□□□ -1.29
SND1-207ENST00000468621 PHF14O94880 888 aa7.02□□□□□ -1.29
SND1-207ENST00000468621 HMGB2P26583 209 aaKnown RBP7.02□□□□□ -1.29
SND1-207ENST00000468621 FRAT1Q92837 279 aaPredicted RBP7.02□□□□□ -1.29
SND1-207ENST00000468621 CLUAP1Q96AJ1 413 aa7.02□□□□□ -1.29
SND1-207ENST00000468621 RUNDC1Q96C34 613 aa7.02□□□□□ -1.29
SND1-207ENST00000468621 FHDC1Q9C0D6 1143 aaPredicted RBP7.02□□□□□ -1.29
SND1-207ENST00000468621 SPINK5Q9NQ38 1064 aaPredicted RBP7.02□□□□□ -1.29
SND1-207ENST00000468621 PCDH10Q9P2E7 1040 aa7.02□□□□□ -1.29
SND1-207ENST00000468621 DLEC1Q9Y238 1755 aa7.02□□□□□ -1.29
SND1-207ENST00000468621 ANKRD31Q8N7Z5 1873 aa7.02□□□□□ -1.29
SND1-207ENST00000468621 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 ARFGEF1Q9Y6D6 1849 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 IGHDP01880 384 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 SSFA2P28290 1259 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 CRKLP46109 303 aaKnown RBP7.01□□□□□ -1.29
SND1-207ENST00000468621 DCTN1Q14203 1278 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 GPR162Q16538 588 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 RC3H1Q5TC82 1133 aaKnown RBP7.01□□□□□ -1.29
SND1-207ENST00000468621 MCM10Q7L590 875 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 WDR63Q8IWG1 891 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 WWC1Q8IX03 1113 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 FLAD1Q8NFF5 587 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 SYT17Q9BSW7 474 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 UPF2Q9HAU5 1272 aaKnown RBP7.01□□□□□ -1.29
SND1-207ENST00000468621 COG6Q9Y2V7 657 aa7.01□□□□□ -1.29
SND1-207ENST00000468621 SBF1O95248 1867 aa7□□□□□ -1.29
SND1-207ENST00000468621 ANKRD36CQ5JPF3 1778 aa7□□□□□ -1.29
SND1-207ENST00000468621 KCNQ3O43525 872 aa7□□□□□ -1.29
SND1-207ENST00000468621 HTATSF1O43719 755 aaKnown RBP7□□□□□ -1.29
SND1-207ENST00000468621 FRAT2O75474 233 aaPredicted RBP7□□□□□ -1.29
SND1-207ENST00000468621 RPS6KA4O75676 772 aa7□□□□□ -1.29
SND1-207ENST00000468621 TEFQ10587 303 aa7□□□□□ -1.29
SND1-207ENST00000468621 NCBP3Q53F19 620 aaKnown RBP7□□□□□ -1.29
SND1-207ENST00000468621 MSL1Q68DK7 614 aa7□□□□□ -1.29
SND1-207ENST00000468621 ZNF790Q6PG37 636 aa7□□□□□ -1.29
SND1-207ENST00000468621 DNAJC10Q8IXB1 793 aa7□□□□□ -1.29
SND1-207ENST00000468621 VSIG10Q8N0Z9 540 aa7□□□□□ -1.29
SND1-207ENST00000468621 KLHL34Q8N239 644 aa7□□□□□ -1.29
SND1-207ENST00000468621 PANK1Q8TE04 598 aa7□□□□□ -1.29
SND1-207ENST00000468621 ARXQ96QS3 562 aa7□□□□□ -1.29
SND1-207ENST00000468621 RWDD1Q9H446 243 aaPredicted RBP7□□□□□ -1.29
SND1-207ENST00000468621 RTN4Q9NQC3 1192 aaKnown RBP7□□□□□ -1.29
SND1-207ENST00000468621 HEG1Q9ULI3 1381 aa6.99□□□□□ -1.29
SND1-207ENST00000468621 CYP19A1P11511 503 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms