RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 APBA3O96018 575 aa9.16□□□□□ -0.94
NXF3-204ENST00000468528 BAG6P46379 1132 aa9.16□□□□□ -0.94
NXF3-204ENST00000468528 NPM2Q86SE8 214 aaKnown RBP9.16□□□□□ -0.94
NXF3-204ENST00000468528 ARHGAP45Q92619 1136 aa9.16□□□□□ -0.94
NXF3-204ENST00000468528 DDX21Q9NR30 783 aaKnown RBP eCLIP9.16□□□□□ -0.94
NXF3-204ENST00000468528 SMC4Q9NTJ3 1288 aa9.16□□□□□ -0.94
NXF3-204ENST00000468528 CCNL1Q9UK58 526 aaPredicted RBP9.16□□□□□ -0.94
NXF3-204ENST00000468528 BTAF1O14981 1849 aa9.15□□□□□ -0.94
NXF3-204ENST00000468528 PTPRCP08575 1304 aa9.15□□□□□ -0.94
NXF3-204ENST00000468528 CNTNAP4Q9C0A0 1308 aa9.15□□□□□ -0.94
NXF3-204ENST00000468528 CYP19A1P11511 503 aaPredicted RBP9.15□□□□□ -0.94
NXF3-204ENST00000468528 EIF2S2P20042 333 aaKnown RBP9.15□□□□□ -0.94
NXF3-204ENST00000468528 KRT24Q2M2I5 525 aa9.15□□□□□ -0.94
NXF3-204ENST00000468528 SSH1Q8WYL5 1049 aa9.15□□□□□ -0.94
NXF3-204ENST00000468528 RGPD3A6NKT7 1758 aaPredicted RBP9.14□□□□□ -0.95
NXF3-204ENST00000468528 RGPD4Q7Z3J3 1758 aa9.14□□□□□ -0.95
NXF3-204ENST00000468528 RGL2O15211 777 aa9.14□□□□□ -0.95
NXF3-204ENST00000468528 DDX58O95786 925 aaKnown RBP9.14□□□□□ -0.95
NXF3-204ENST00000468528 SLC4A2P04920 1241 aa9.14□□□□□ -0.95
NXF3-204ENST00000468528 IL6STP40189 918 aaPredicted RBP9.14□□□□□ -0.95
NXF3-204ENST00000468528 TXNRD1Q16881 649 aa9.14□□□□□ -0.95
NXF3-204ENST00000468528 PTF1AQ7RTS3 328 aa9.14□□□□□ -0.95
NXF3-204ENST00000468528 DNAJC10Q8IXB1 793 aa9.14□□□□□ -0.95
NXF3-204ENST00000468528 SLC4A9Q96Q91 983 aa9.14□□□□□ -0.95
NXF3-204ENST00000468528 CCDC87Q9NVE4 849 aa9.14□□□□□ -0.95
NXF3-204ENST00000468528 USP16Q9Y5T5 823 aa9.14□□□□□ -0.95
NXF3-204ENST00000468528 EP400Q96L91 3159 aa9.14□□□□□ -0.95
NXF3-204ENST00000468528 RNF123Q5XPI4 1314 aa9.13□□□□□ -0.95
NXF3-204ENST00000468528 A0A087WZG4 1122 aa9.13□□□□□ -0.95
NXF3-204ENST00000468528 MAPK8IP2Q13387 824 aaPredicted RBP9.13□□□□□ -0.95
NXF3-204ENST00000468528 ITPK1Q13572 414 aa9.13□□□□□ -0.95
NXF3-204ENST00000468528 MRPL50Q8N5N7 158 aaKnown RBP9.13□□□□□ -0.95
NXF3-204ENST00000468528 API5Q9BZZ5 524 aaKnown RBP9.13□□□□□ -0.95
NXF3-204ENST00000468528 CHPF2Q9P2E5 772 aa9.13□□□□□ -0.95
NXF3-204ENST00000468528 LY75O60449 1722 aa9.13□□□□□ -0.95
NXF3-204ENST00000468528 LAMB4A4D0S4 1761 aa9.12□□□□□ -0.95
NXF3-204ENST00000468528 MYCNP04198 464 aaPredicted RBP9.12□□□□□ -0.95
NXF3-204ENST00000468528 CANXP27824 592 aaKnown RBP9.12□□□□□ -0.95
NXF3-204ENST00000468528 CRKLP46109 303 aaKnown RBP9.12□□□□□ -0.95
NXF3-204ENST00000468528 FLIIQ13045 1269 aa9.12□□□□□ -0.95
NXF3-204ENST00000468528 PDE3AQ14432 1141 aa9.12□□□□□ -0.95
NXF3-204ENST00000468528 PDIA6Q15084 440 aa9.12□□□□□ -0.95
NXF3-204ENST00000468528 ZKSCAN2Q63HK3 967 aa9.12□□□□□ -0.95
NXF3-204ENST00000468528 ATF7IPQ6VMQ6 1270 aa9.12□□□□□ -0.95
NXF3-204ENST00000468528 FLAD1Q8NFF5 587 aa9.12□□□□□ -0.95
NXF3-204ENST00000468528 CHMP4BQ9H444 224 aaKnown RBP9.12□□□□□ -0.95
NXF3-204ENST00000468528 C5P01031 1676 aa9.12□□□□□ -0.95
NXF3-204ENST00000468528 CACNA1FO60840 1977 aa9.12□□□□□ -0.95
NXF3-204ENST00000468528 PRAMEF22A3QJZ6 481 aa9.11□□□□□ -0.95
NXF3-204ENST00000468528 RPS6KA4O75676 772 aa9.11□□□□□ -0.95
NXF3-204ENST00000468528 BCAR3O75815 825 aa9.11□□□□□ -0.95
NXF3-204ENST00000468528 A1BGP04217 495 aa9.11□□□□□ -0.95
NXF3-204ENST00000468528 RRP1P56182 461 aaKnown RBP9.11□□□□□ -0.95
NXF3-204ENST00000468528 INTS5Q6P9B9 1019 aaKnown RBP9.11□□□□□ -0.95
NXF3-204ENST00000468528 LINC00116Q8NCU8 138 aa9.11□□□□□ -0.95
NXF3-204ENST00000468528 CAMKK2Q96RR4 588 aa9.11□□□□□ -0.95
NXF3-204ENST00000468528 RTCBQ9Y3I0 505 aaKnown RBP9.11□□□□□ -0.95
NXF3-204ENST00000468528 TNS1Q9HBL0 1735 aaKnown RBP9.11□□□□□ -0.95
NXF3-204ENST00000468528 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 ERVV-1B6SEH8 477 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 SSFA2P28290 1259 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 EIF5P55010 431 aaKnown RBP9.1□□□□□ -0.95
NXF3-204ENST00000468528 PLCB2Q00722 1185 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 FKBP5Q13451 457 aaPredicted RBP9.1□□□□□ -0.95
NXF3-204ENST00000468528 AAMPQ13685 434 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 NBPF14Q5TI25 921 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 NBPF10Q6P3W6 841 aaKnown RBP9.1□□□□□ -0.95
NXF3-204ENST00000468528 KIF6Q6ZMV9 814 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 ANKRD13DQ6ZTN6 518 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 LRP10Q7Z4F1 713 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 FTSJ3Q8IY81 847 aaKnown RBP9.1□□□□□ -0.95
NXF3-204ENST00000468528 PROM2Q8N271 834 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 NBPF15Q8N660 670 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 PLBD2Q8NHP8 589 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 NECTIN2Q92692 538 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 FRAT1Q92837 279 aaPredicted RBP9.1□□□□□ -0.95
NXF3-204ENST00000468528 AK7Q96M32 723 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 BCL2L13Q9BXK5 485 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 LRRC4BQ9NT99 713 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 NOB1Q9ULX3 412 aaKnown RBP9.1□□□□□ -0.95
NXF3-204ENST00000468528 SUPT16HQ9Y5B9 1047 aaKnown RBP9.1□□□□□ -0.95
NXF3-204ENST00000468528 TJP1Q07157 1748 aa9.1□□□□□ -0.95
NXF3-204ENST00000468528 IBTKQ9P2D0 1353 aaPredicted RBP9.1□□□□□ -0.95
NXF3-204ENST00000468528 GNPATO15228 680 aa9.09□□□□□ -0.95
NXF3-204ENST00000468528 NEFLP07196 543 aa9.09□□□□□ -0.95
NXF3-204ENST00000468528 MYL6BP14649 208 aa9.09□□□□□ -0.95
NXF3-204ENST00000468528 NEXNQ0ZGT2 675 aa9.09□□□□□ -0.95
NXF3-204ENST00000468528 HSP90AB3PQ58FF7 597 aa9.09□□□□□ -0.95
NXF3-204ENST00000468528 KSR2Q6VAB6 950 aa9.09□□□□□ -0.95
NXF3-204ENST00000468528 COPS6Q7L5N1 327 aa9.09□□□□□ -0.95
NXF3-204ENST00000468528 DZIP1LQ8IYY4 767 aaKnown RBP9.09□□□□□ -0.95
NXF3-204ENST00000468528 ZNF652Q9Y2D9 606 aa9.09□□□□□ -0.95
NXF3-204ENST00000468528 ZBTB1Q9Y2K1 713 aa9.09□□□□□ -0.95
NXF3-204ENST00000468528 COL5A3P25940 1745 aaPredicted RBP9.08□□□□□ -0.96
NXF3-204ENST00000468528 RREB1Q92766 1687 aa9.08□□□□□ -0.96
NXF3-204ENST00000468528 TCERG1O14776 1098 aaKnown RBP9.08□□□□□ -0.96
NXF3-204ENST00000468528 TRIM27P14373 513 aa9.08□□□□□ -0.96
NXF3-204ENST00000468528 CCT4P50991 539 aaKnown RBP9.08□□□□□ -0.96
NXF3-204ENST00000468528 EN1Q05925 392 aaPredicted RBP9.08□□□□□ -0.96
NXF3-204ENST00000468528 PROSER3Q2NL68 480 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms