RNA–Protein interactions for RNA: ENST00000468164.1

C9orf3-212, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 849 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-212ENST00000468164 BCS1LQ9Y276 419 aa17.94■□□□□ 0.46
C9orf3-212ENST00000468164 ZNF330Q9Y3S2 320 aaPredicted RBP17.94■□□□□ 0.46
C9orf3-212ENST00000468164 ATP10DQ9P241 1426 aa17.92■□□□□ 0.46
C9orf3-212ENST00000468164 DPEP1P16444 411 aa17.92■□□□□ 0.46
C9orf3-212ENST00000468164 TGFB2P61812 414 aa17.92■□□□□ 0.46
C9orf3-212ENST00000468164 DDR1Q08345 913 aa17.92■□□□□ 0.46
C9orf3-212ENST00000468164 ZNF790Q6PG37 636 aa17.92■□□□□ 0.46
C9orf3-212ENST00000468164 VSIG10Q8N0Z9 540 aa17.92■□□□□ 0.46
C9orf3-212ENST00000468164 ZNF526Q8TF50 670 aaPredicted RBP17.92■□□□□ 0.46
C9orf3-212ENST00000468164 RTF1Q92541 710 aaKnown RBP17.92■□□□□ 0.46
C9orf3-212ENST00000468164 ZNF496Q96IT1 587 aaPredicted RBP17.92■□□□□ 0.46
C9orf3-212ENST00000468164 BTBD11A6QL63 1104 aa17.91■□□□□ 0.46
C9orf3-212ENST00000468164 GIGYF1O75420 1035 aaPredicted RBP17.91■□□□□ 0.46
C9orf3-212ENST00000468164 STARD3NLO95772 234 aa17.91■□□□□ 0.46
C9orf3-212ENST00000468164 MCM10Q7L590 875 aa17.91■□□□□ 0.46
C9orf3-212ENST00000468164 HEG1Q9ULI3 1381 aa17.91■□□□□ 0.46
C9orf3-212ENST00000468164 CACNA1SQ13698 1873 aa17.9■□□□□ 0.46
C9orf3-212ENST00000468164 FCHSD2O94868 740 aa17.9■□□□□ 0.46
C9orf3-212ENST00000468164 NARFQ9UHQ1 456 aa17.9■□□□□ 0.46
C9orf3-212ENST00000468164 SCN7AQ01118 1682 aa17.9■□□□□ 0.46
C9orf3-212ENST00000468164 CCDC88AQ3V6T2 1871 aa17.89■□□□□ 0.45
C9orf3-212ENST00000468164 KCNQ3O43525 872 aa17.89■□□□□ 0.45
C9orf3-212ENST00000468164 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
C9orf3-212ENST00000468164 FMNL2Q96PY5 1086 aa17.89■□□□□ 0.45
C9orf3-212ENST00000468164 POLRMTO00411 1230 aaKnown RBP17.88■□□□□ 0.45
C9orf3-212ENST00000468164 NEFMP07197 916 aa17.88■□□□□ 0.45
C9orf3-212ENST00000468164 C1QTNF8P60827 252 aa17.88■□□□□ 0.45
C9orf3-212ENST00000468164 BICDL1Q6ZP65 573 aa17.88■□□□□ 0.45
C9orf3-212ENST00000468164 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
C9orf3-212ENST00000468164 NRXN2Q9P2S2 1712 aa17.88■□□□□ 0.45
C9orf3-212ENST00000468164 CEMIPQ8WUJ3 1361 aa17.88■□□□□ 0.45
C9orf3-212ENST00000468164 DLEC1Q9Y238 1755 aa17.87■□□□□ 0.45
C9orf3-212ENST00000468164 TM4SF1P30408 202 aa17.87■□□□□ 0.45
C9orf3-212ENST00000468164 NFIXQ14938 502 aa17.87■□□□□ 0.45
C9orf3-212ENST00000468164 NPM2Q86SE8 214 aaKnown RBP17.87■□□□□ 0.45
C9orf3-212ENST00000468164 BCORQ6W2J9 1755 aa17.86■□□□□ 0.45
C9orf3-212ENST00000468164 SBF1O95248 1867 aa17.86■□□□□ 0.45
C9orf3-212ENST00000468164 SENP3-EIF4A1A0A087X0R7 540 aa17.86■□□□□ 0.45
C9orf3-212ENST00000468164 CHRNA5P30532 468 aa17.86■□□□□ 0.45
C9orf3-212ENST00000468164 TEX13AQ9BXU3 409 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-212ENST00000468164 GPBP1L1Q9HC44 474 aaPredicted RBP17.86■□□□□ 0.45
C9orf3-212ENST00000468164 ANKRD31Q8N7Z5 1873 aa17.86■□□□□ 0.45
C9orf3-212ENST00000468164 LAMB4A4D0S4 1761 aa17.85■□□□□ 0.45
C9orf3-212ENST00000468164 A1BGP04217 495 aa17.85■□□□□ 0.45
C9orf3-212ENST00000468164 BCL2L12Q9HB09 334 aa17.85■□□□□ 0.45
C9orf3-212ENST00000468164 PIM2Q9P1W9 311 aa17.85■□□□□ 0.45
C9orf3-212ENST00000468164 TBC1D2BQ9UPU7 963 aa17.85■□□□□ 0.45
C9orf3-212ENST00000468164 A0A087WZG4 1122 aa17.84■□□□□ 0.45
C9orf3-212ENST00000468164 KCNA3P22001 575 aa17.84■□□□□ 0.45
C9orf3-212ENST00000468164 PIP4K2AP48426 406 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-212ENST00000468164 EIF5P55010 431 aaKnown RBP17.84■□□□□ 0.45
C9orf3-212ENST00000468164 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
C9orf3-212ENST00000468164 ADCY9O60503 1353 aa17.83■□□□□ 0.45
C9orf3-212ENST00000468164 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.44
C9orf3-212ENST00000468164 SERPINB2P05120 415 aa17.83■□□□□ 0.44
C9orf3-212ENST00000468164 DDX10Q13206 875 aaKnown RBP17.83■□□□□ 0.44
C9orf3-212ENST00000468164 DALRD3Q5D0E6 543 aaKnown RBP17.83■□□□□ 0.44
C9orf3-212ENST00000468164 MIS18AQ9NYP9 233 aa17.82■□□□□ 0.44
C9orf3-212ENST00000468164 MAPK8IP3Q9UPT6 1336 aa17.81■□□□□ 0.44
C9orf3-212ENST00000468164 IL6STP40189 918 aaPredicted RBP17.81■□□□□ 0.44
C9orf3-212ENST00000468164 TBC1D9BQ66K14 1250 aa17.81■□□□□ 0.44
C9orf3-212ENST00000468164 USP16Q9Y5T5 823 aa17.81■□□□□ 0.44
C9orf3-212ENST00000468164 NPHP1O15259 732 aa17.8■□□□□ 0.44
C9orf3-212ENST00000468164 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
C9orf3-212ENST00000468164 COL11A2P13942 1736 aaPredicted RBP17.8■□□□□ 0.44
C9orf3-212ENST00000468164 CARMIL3Q8ND23 1372 aa17.79■□□□□ 0.44
C9orf3-212ENST00000468164 HTATSF1O43719 755 aaKnown RBP17.79■□□□□ 0.44
C9orf3-212ENST00000468164 TAF7Q15545 349 aaPredicted RBP17.79■□□□□ 0.44
C9orf3-212ENST00000468164 NUP98P52948 1817 aa17.78■□□□□ 0.44
C9orf3-212ENST00000468164 SNRPA1P09661 255 aaKnown RBP17.78■□□□□ 0.44
C9orf3-212ENST00000468164 DZIP3Q86Y13 1208 aaKnown RBP17.78■□□□□ 0.44
C9orf3-212ENST00000468164 C2CD5Q86YS7 1000 aa17.78■□□□□ 0.44
C9orf3-212ENST00000468164 THUMPD2Q9BTF0 503 aaKnown RBP17.78■□□□□ 0.44
C9orf3-212ENST00000468164 H0YIN7 160 aa17.76■□□□□ 0.43
C9orf3-212ENST00000468164 RALBP1Q15311 655 aa17.76■□□□□ 0.43
C9orf3-212ENST00000468164 NFE2L2Q16236 605 aa17.76■□□□□ 0.43
C9orf3-212ENST00000468164 C9orf131Q5VYM1 1079 aa17.76■□□□□ 0.43
C9orf3-212ENST00000468164 PLEKHF1Q96S99 279 aa17.76■□□□□ 0.43
C9orf3-212ENST00000468164 SETDB2Q96T68 719 aa17.76■□□□□ 0.43
C9orf3-212ENST00000468164 PNNQ9H307 717 aaKnown RBP17.76■□□□□ 0.43
C9orf3-212ENST00000468164 TIAM2Q8IVF5 1701 aa17.75■□□□□ 0.43
C9orf3-212ENST00000468164 CEP350Q5VT06 3117 aa17.75■□□□□ 0.43
C9orf3-212ENST00000468164 CAMTA2O94983 1202 aa17.75■□□□□ 0.43
C9orf3-212ENST00000468164 NGEFQ8N5V2 710 aa17.74■□□□□ 0.43
C9orf3-212ENST00000468164 ZNF622Q969S3 477 aaKnown RBP eCLIP17.74■□□□□ 0.43
C9orf3-212ENST00000468164 RNF181Q9P0P0 153 aa17.74■□□□□ 0.43
C9orf3-212ENST00000468164 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
C9orf3-212ENST00000468164 PRR5LQ6MZQ0 368 aa17.73■□□□□ 0.43
C9orf3-212ENST00000468164 TTLL6Q8N841 843 aa17.73■□□□□ 0.43
C9orf3-212ENST00000468164 CNBD1Q8NA66 436 aa17.73■□□□□ 0.43
C9orf3-212ENST00000468164 ARFGEF2Q9Y6D5 1785 aa17.73■□□□□ 0.43
C9orf3-212ENST00000468164 SLX4Q8IY92 1834 aa17.72■□□□□ 0.43
C9orf3-212ENST00000468164 FER1L6Q2WGJ9 1857 aa17.72■□□□□ 0.43
C9orf3-212ENST00000468164 RASSF7Q02833 373 aa17.72■□□□□ 0.43
C9orf3-212ENST00000468164 PNISRQ8TF01 805 aaKnown RBP17.72■□□□□ 0.43
C9orf3-212ENST00000468164 DICER1Q9UPY3 1922 aaKnown RBP17.72■□□□□ 0.43
C9orf3-212ENST00000468164 FAM177BA6PVY3 158 aa17.71■□□□□ 0.43
C9orf3-212ENST00000468164 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
C9orf3-212ENST00000468164 PDE6BP35913 854 aa17.71■□□□□ 0.43
C9orf3-212ENST00000468164 ST5P78524 1137 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms