RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 HTATSF1O43719 755 aaKnown RBP15.84■□□□□ 0.13
CTNS-205ENST00000467663 NCBP3Q53F19 620 aaKnown RBP15.84■□□□□ 0.13
CTNS-205ENST00000467663 ZNF784Q8NCA9 323 aaPredicted RBP15.84■□□□□ 0.13
CTNS-205ENST00000467663 YTHDC1Q96MU7 727 aaKnown RBP15.84■□□□□ 0.13
CTNS-205ENST00000467663 ZBTB1Q9Y2K1 713 aa15.84■□□□□ 0.13
CTNS-205ENST00000467663 PARP3Q9Y6F1 533 aa15.84■□□□□ 0.13
CTNS-205ENST00000467663 HEG1Q9ULI3 1381 aa15.84■□□□□ 0.13
CTNS-205ENST00000467663 CHD4Q14839 1912 aa15.84■□□□□ 0.13
CTNS-205ENST00000467663 SIPA1L3O60292 1781 aaPredicted RBP15.83■□□□□ 0.12
CTNS-205ENST00000467663 BTBD11A6QL63 1104 aa15.83■□□□□ 0.12
CTNS-205ENST00000467663 STARD3NLO95772 234 aa15.83■□□□□ 0.12
CTNS-205ENST00000467663 TGFB2P61812 414 aa15.83■□□□□ 0.12
CTNS-205ENST00000467663 HNRNPUQ00839 825 aaKnown RBP eCLIP15.83■□□□□ 0.12
CTNS-205ENST00000467663 FKBP8Q14318 412 aa15.83■□□□□ 0.12
CTNS-205ENST00000467663 RTF1Q92541 710 aaKnown RBP15.83■□□□□ 0.12
CTNS-205ENST00000467663 TEX13AQ9BXU3 409 aaPredicted RBP15.83■□□□□ 0.12
CTNS-205ENST00000467663 ADAMTS8Q9UP79 889 aa15.83■□□□□ 0.12
CTNS-205ENST00000467663 C10orf71Q711Q0 1435 aa15.83■□□□□ 0.12
CTNS-205ENST00000467663 ZPR1O75312 459 aa15.82■□□□□ 0.12
CTNS-205ENST00000467663 FMNL2Q96PY5 1086 aa15.82■□□□□ 0.12
CTNS-205ENST00000467663 PLEKHF1Q96S99 279 aa15.82■□□□□ 0.12
CTNS-205ENST00000467663 NARFQ9UHQ1 456 aa15.82■□□□□ 0.12
CTNS-205ENST00000467663 ZBED9Q6R2W3 1325 aa15.82■□□□□ 0.12
CTNS-205ENST00000467663 UTRNP46939 3433 aa15.82■□□□□ 0.12
CTNS-205ENST00000467663 PXDNLA1KZ92 1463 aa15.81■□□□□ 0.12
CTNS-205ENST00000467663 TM4SF1P30408 202 aa15.81■□□□□ 0.12
CTNS-205ENST00000467663 COL15A1P39059 1388 aa15.81■□□□□ 0.12
CTNS-205ENST00000467663 USPL1Q5W0Q7 1092 aa15.81■□□□□ 0.12
CTNS-205ENST00000467663 MCM10Q7L590 875 aa15.81■□□□□ 0.12
CTNS-205ENST00000467663 KIF13BQ9NQT8 1826 aa15.8■□□□□ 0.12
CTNS-205ENST00000467663 KCNQ3O43525 872 aa15.8■□□□□ 0.12
CTNS-205ENST00000467663 CANXP27824 592 aaKnown RBP15.8■□□□□ 0.12
CTNS-205ENST00000467663 EIF5P55010 431 aaKnown RBP15.8■□□□□ 0.12
CTNS-205ENST00000467663 DDR1Q08345 913 aa15.8■□□□□ 0.12
CTNS-205ENST00000467663 POLRMTO00411 1230 aaKnown RBP15.79■□□□□ 0.12
CTNS-205ENST00000467663 NEFMP07197 916 aa15.79■□□□□ 0.12
CTNS-205ENST00000467663 DCTN1Q14203 1278 aa15.79■□□□□ 0.12
CTNS-205ENST00000467663 BCL2L12Q9HB09 334 aa15.79■□□□□ 0.12
CTNS-205ENST00000467663 A0A0G2JLW4 131 aa15.78■□□□□ 0.12
CTNS-205ENST00000467663 RUNDC1Q96C34 613 aa15.78■□□□□ 0.12
CTNS-205ENST00000467663 KIAA1551Q9HCM1 1747 aa15.77■□□□□ 0.12
CTNS-205ENST00000467663 A0A087WZG4 1122 aa15.77■□□□□ 0.12
CTNS-205ENST00000467663 DPEP1P16444 411 aa15.77■□□□□ 0.12
CTNS-205ENST00000467663 IL6STP40189 918 aaPredicted RBP15.77■□□□□ 0.12
CTNS-205ENST00000467663 TAF7Q15545 349 aaPredicted RBP15.77■□□□□ 0.12
CTNS-205ENST00000467663 WWC3Q9ULE0 1092 aa15.77■□□□□ 0.12
CTNS-205ENST00000467663 KCNA3P22001 575 aa15.76■□□□□ 0.11
CTNS-205ENST00000467663 NFIXQ14938 502 aa15.76■□□□□ 0.11
CTNS-205ENST00000467663 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
CTNS-205ENST00000467663 USP16Q9Y5T5 823 aa15.76■□□□□ 0.11
CTNS-205ENST00000467663 A1BGP04217 495 aa15.75■□□□□ 0.11
CTNS-205ENST00000467663 SNRPA1P09661 255 aaKnown RBP15.75■□□□□ 0.11
CTNS-205ENST00000467663 GOLGB1Q14789 3259 aaKnown RBP15.75■□□□□ 0.11
CTNS-205ENST00000467663 MAPK8IP3Q9UPT6 1336 aa15.73■□□□□ 0.11
CTNS-205ENST00000467663 PRAMEF22A3QJZ6 481 aa15.73■□□□□ 0.11
CTNS-205ENST00000467663 SERPINB2P05120 415 aa15.73■□□□□ 0.11
CTNS-205ENST00000467663 BCS1LQ9Y276 419 aa15.73■□□□□ 0.11
CTNS-205ENST00000467663 N4BP2Q86UW6 1770 aaPredicted RBP15.72■□□□□ 0.11
CTNS-205ENST00000467663 MIS18AQ9NYP9 233 aa15.72■□□□□ 0.11
CTNS-205ENST00000467663 PIM2Q9P1W9 311 aa15.72■□□□□ 0.11
CTNS-205ENST00000467663 TBC1D2BQ9UPU7 963 aa15.72■□□□□ 0.11
CTNS-205ENST00000467663 CCDC27Q2M243 656 aa15.71■□□□□ 0.11
CTNS-205ENST00000467663 ZNF330Q9Y3S2 320 aaPredicted RBP15.71■□□□□ 0.11
CTNS-205ENST00000467663 ADCY9O60503 1353 aa15.71■□□□□ 0.11
CTNS-205ENST00000467663 NRXN2Q9P2S2 1712 aa15.71■□□□□ 0.1
CTNS-205ENST00000467663 CAMTA2O94983 1202 aa15.7■□□□□ 0.1
CTNS-205ENST00000467663 TBC1D9BQ66K14 1250 aa15.7■□□□□ 0.1
CTNS-205ENST00000467663 NPM2Q86SE8 214 aaKnown RBP15.7■□□□□ 0.1
CTNS-205ENST00000467663 DLG5Q8TDM6 1919 aa15.69■□□□□ 0.1
CTNS-205ENST00000467663 CHRNA5P30532 468 aa15.69■□□□□ 0.1
CTNS-205ENST00000467663 DALRD3Q5D0E6 543 aaKnown RBP15.69■□□□□ 0.1
CTNS-205ENST00000467663 BICDL1Q6ZP65 573 aa15.69■□□□□ 0.1
CTNS-205ENST00000467663 DZIP3Q86Y13 1208 aaKnown RBP15.69■□□□□ 0.1
CTNS-205ENST00000467663 THUMPD2Q9BTF0 503 aaKnown RBP15.69■□□□□ 0.1
CTNS-205ENST00000467663 ATP10DQ9P241 1426 aa15.68■□□□□ 0.1
CTNS-205ENST00000467663 BRCA1P38398 1863 aaKnown RBP15.68■□□□□ 0.1
CTNS-205ENST00000467663 SCN7AQ01118 1682 aa15.68■□□□□ 0.1
CTNS-205ENST00000467663 NBPF26B4DH59 902 aa15.68■□□□□ 0.1
CTNS-205ENST00000467663 APAF1O14727 1248 aa15.68■□□□□ 0.1
CTNS-205ENST00000467663 GIGYF1O75420 1035 aaPredicted RBP15.68■□□□□ 0.1
CTNS-205ENST00000467663 PIP4K2AP48426 406 aaPredicted RBP15.68■□□□□ 0.1
CTNS-205ENST00000467663 RIPK4P57078 832 aa15.68■□□□□ 0.1
CTNS-205ENST00000467663 EIF4A1P60842 406 aaKnown RBP15.68■□□□□ 0.1
CTNS-205ENST00000467663 NBPF10Q6P3W6 841 aaKnown RBP15.68■□□□□ 0.1
CTNS-205ENST00000467663 NBPF15Q8N660 670 aa15.68■□□□□ 0.1
CTNS-205ENST00000467663 AFDNP55196 1824 aaKnown RBP15.67■□□□□ 0.1
CTNS-205ENST00000467663 RGL2O15211 777 aa15.67■□□□□ 0.1
CTNS-205ENST00000467663 TMPOP42166 694 aaKnown RBP15.67■□□□□ 0.1
CTNS-205ENST00000467663 CLEC4GQ6UXB4 293 aa15.67■□□□□ 0.1
CTNS-205ENST00000467663 ARHGAP27Q6ZUM4 889 aa15.67■□□□□ 0.1
CTNS-205ENST00000467663 CARMIL3Q8ND23 1372 aa15.66■□□□□ 0.1
CTNS-205ENST00000467663 CCDC146Q8IYE0 955 aa15.66■□□□□ 0.1
CTNS-205ENST00000467663 SETDB2Q96T68 719 aa15.66■□□□□ 0.1
CTNS-205ENST00000467663 KDM3BQ7LBC6 1761 aa15.66■□□□□ 0.1
CTNS-205ENST00000467663 LMOD3Q0VAK6 560 aa15.65■□□□□ 0.1
CTNS-205ENST00000467663 PRR5LQ6MZQ0 368 aa15.65■□□□□ 0.1
CTNS-205ENST00000467663 BABAM1Q9NWV8 329 aa15.65■□□□□ 0.1
CTNS-205ENST00000467663 ZNF521Q96K83 1311 aa15.65■□□□□ 0.1
CTNS-205ENST00000467663 C1QTNF8P60827 252 aa15.64■□□□□ 0.09
CTNS-205ENST00000467663 WDR63Q8IWG1 891 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms