RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 CTBSQ01459 385 aa9.88□□□□□ -0.83
PRPF40A-205ENST00000467114 NCOA4Q13772 614 aa9.88□□□□□ -0.83
PRPF40A-205ENST00000467114 NBPF1Q3BBV0 1214 aa9.88□□□□□ -0.83
PRPF40A-205ENST00000467114 GPAT2Q6NUI2 795 aa9.88□□□□□ -0.83
PRPF40A-205ENST00000467114 GALNT6Q8NCL4 622 aa9.88□□□□□ -0.83
PRPF40A-205ENST00000467114 ZDHHC3Q9NYG2 299 aa9.88□□□□□ -0.83
PRPF40A-205ENST00000467114 BACH1O14867 736 aa9.87□□□□□ -0.83
PRPF40A-205ENST00000467114 EDARADDQ8WWZ3 215 aa9.87□□□□□ -0.83
PRPF40A-205ENST00000467114 DCAF5Q96JK2 942 aa9.87□□□□□ -0.83
PRPF40A-205ENST00000467114 A0A1W2PNR3 127 aa9.86□□□□□ -0.83
PRPF40A-205ENST00000467114 USP17L5A8MUK1 530 aa9.86□□□□□ -0.83
PRPF40A-205ENST00000467114 SNRPNP63162 240 aaKnown RBP9.86□□□□□ -0.83
PRPF40A-205ENST00000467114 SUZ12Q15022 739 aaKnown RBP9.86□□□□□ -0.83
PRPF40A-205ENST00000467114 SLCO4C1Q6ZQN7 724 aa9.86□□□□□ -0.83
PRPF40A-205ENST00000467114 ATXN7O15265 892 aaPredicted RBP9.85□□□□□ -0.83
PRPF40A-205ENST00000467114 UBTFP17480 764 aaKnown RBP9.85□□□□□ -0.83
PRPF40A-205ENST00000467114 TMEM132AQ24JP5 1023 aa9.85□□□□□ -0.83
PRPF40A-205ENST00000467114 ADAMTS19Q8TE59 1207 aa9.85□□□□□ -0.83
PRPF40A-205ENST00000467114 ZNF358Q9NW07 568 aa9.85□□□□□ -0.83
PRPF40A-205ENST00000467114 CABP1Q9NZU7 370 aa9.85□□□□□ -0.83
PRPF40A-205ENST00000467114 SCHIP1Q9P0W5 487 aaPredicted RBP9.85□□□□□ -0.83
PRPF40A-205ENST00000467114 GGA1Q9UJY5 639 aa9.85□□□□□ -0.83
PRPF40A-205ENST00000467114 POM121CA8CG34 1229 aa9.84□□□□□ -0.83
PRPF40A-205ENST00000467114 TATP17735 454 aaPredicted RBP9.84□□□□□ -0.83
PRPF40A-205ENST00000467114 ARSJQ5FYB0 599 aaPredicted RBP9.84□□□□□ -0.83
PRPF40A-205ENST00000467114 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.84□□□□□ -0.83
PRPF40A-205ENST00000467114 ZIC5Q96T25 663 aa9.84□□□□□ -0.83
PRPF40A-205ENST00000467114 HCN2Q9UL51 889 aa9.84□□□□□ -0.83
PRPF40A-205ENST00000467114 ARAFP10398 606 aa9.83□□□□□ -0.84
PRPF40A-205ENST00000467114 EPHA4P54764 986 aa9.83□□□□□ -0.84
PRPF40A-205ENST00000467114 TNP2Q05952 138 aa9.83□□□□□ -0.84
PRPF40A-205ENST00000467114 PSME1Q06323 249 aa9.83□□□□□ -0.84
PRPF40A-205ENST00000467114 PLA2G4EQ3MJ16 856 aa9.83□□□□□ -0.84
PRPF40A-205ENST00000467114 FAM182BQ5T319 152 aa9.83□□□□□ -0.84
PRPF40A-205ENST00000467114 PLEKHM2Q8IWE5 1019 aa9.83□□□□□ -0.84
PRPF40A-205ENST00000467114 DEPDC4Q8N2C3 294 aa9.83□□□□□ -0.84
PRPF40A-205ENST00000467114 LOC100996750A0A140TA64 210 aa9.82□□□□□ -0.84
PRPF40A-205ENST00000467114 EPXP11678 715 aa9.82□□□□□ -0.84
PRPF40A-205ENST00000467114 HOXB4P17483 251 aaPredicted RBP9.82□□□□□ -0.84
PRPF40A-205ENST00000467114 KRTAP4-6Q9BYQ5 205 aa9.82□□□□□ -0.84
PRPF40A-205ENST00000467114 MKL2Q9ULH7 1088 aa9.82□□□□□ -0.84
PRPF40A-205ENST00000467114 ITGB2P05107 769 aa9.81□□□□□ -0.84
PRPF40A-205ENST00000467114 FAM157BP0CG42 384 aa9.81□□□□□ -0.84
PRPF40A-205ENST00000467114 MAPTP10636 758 aaKnown RBP9.81□□□□□ -0.84
PRPF40A-205ENST00000467114 TEAD4Q15561 434 aa9.81□□□□□ -0.84
PRPF40A-205ENST00000467114 SAMD5Q5TGI4 173 aa9.81□□□□□ -0.84
PRPF40A-205ENST00000467114 TRIM50Q86XT4 487 aa9.81□□□□□ -0.84
PRPF40A-205ENST00000467114 ZDHHC1Q8WTX9 485 aa9.81□□□□□ -0.84
PRPF40A-205ENST00000467114 UCN2Q96RP3 112 aa9.81□□□□□ -0.84
PRPF40A-205ENST00000467114 ZBTB7BO15156 539 aaPredicted RBP9.8□□□□□ -0.84
PRPF40A-205ENST00000467114 HDGFL1Q5TGJ6 251 aa9.8□□□□□ -0.84
PRPF40A-205ENST00000467114 PARP3Q9Y6F1 533 aa9.8□□□□□ -0.84
PRPF40A-205ENST00000467114 DCDC2BA2VCK2 349 aa9.79□□□□□ -0.84
PRPF40A-205ENST00000467114 USP17L3A6NCW0 530 aa9.79□□□□□ -0.84
PRPF40A-205ENST00000467114 USP17L4A6NCW7 530 aa9.79□□□□□ -0.84
PRPF40A-205ENST00000467114 TXLNAP40222 546 aa9.79□□□□□ -0.84
PRPF40A-205ENST00000467114 USP17L2Q6R6M4 530 aa9.79□□□□□ -0.84
PRPF40A-205ENST00000467114 USP17L1Q7RTZ2 530 aa9.79□□□□□ -0.84
PRPF40A-205ENST00000467114 L3MBTL2Q969R5 705 aa9.79□□□□□ -0.84
PRPF40A-205ENST00000467114 RRAGCQ9HB90 399 aa9.79□□□□□ -0.84
PRPF40A-205ENST00000467114 AVENQ9NQS1 362 aaPredicted RBP9.79□□□□□ -0.84
PRPF40A-205ENST00000467114 NEURL1BA8MQ27 555 aa9.78□□□□□ -0.84
PRPF40A-205ENST00000467114 KHNYNO15037 678 aaKnown RBP9.78□□□□□ -0.84
PRPF40A-205ENST00000467114 CD33P20138 364 aa9.78□□□□□ -0.84
PRPF40A-205ENST00000467114 NOS2P35228 1153 aa9.78□□□□□ -0.84
PRPF40A-205ENST00000467114 ATP1A2P50993 1020 aa9.78□□□□□ -0.84
PRPF40A-205ENST00000467114 LINC00114Q6XXX2 140 aa9.78□□□□□ -0.84
PRPF40A-205ENST00000467114 ALYREFQ86V81 257 aaKnown RBP9.78□□□□□ -0.84
PRPF40A-205ENST00000467114 SLC9A9Q8IVB4 645 aa9.78□□□□□ -0.84
PRPF40A-205ENST00000467114 TNS4Q8IZW8 715 aa9.78□□□□□ -0.84
PRPF40A-205ENST00000467114 BTBD6Q96KE9 485 aa9.78□□□□□ -0.84
PRPF40A-205ENST00000467114 EML1O00423 815 aa9.77□□□□□ -0.85
PRPF40A-205ENST00000467114 MSTNO14793 375 aa9.77□□□□□ -0.85
PRPF40A-205ENST00000467114 EFSO43281 561 aa9.77□□□□□ -0.85
PRPF40A-205ENST00000467114 ATP9BO43861 1147 aa9.77□□□□□ -0.85
PRPF40A-205ENST00000467114 BICDL1Q6ZP65 573 aa9.77□□□□□ -0.85
PRPF40A-205ENST00000467114 C7orf43Q8WVR3 580 aa9.77□□□□□ -0.85
PRPF40A-205ENST00000467114 KLF15Q9UIH9 416 aa9.77□□□□□ -0.85
PRPF40A-205ENST00000467114 KIAA1024Q9UPX6 916 aa9.77□□□□□ -0.85
PRPF40A-205ENST00000467114 GJA3Q9Y6H8 435 aa9.77□□□□□ -0.85
PRPF40A-205ENST00000467114 AMPD1P23109 780 aa9.76□□□□□ -0.85
PRPF40A-205ENST00000467114 ADH6P28332 368 aa9.76□□□□□ -0.85
PRPF40A-205ENST00000467114 CLDN10P78369 228 aa9.76□□□□□ -0.85
PRPF40A-205ENST00000467114 LAMC2Q13753 1193 aa9.76□□□□□ -0.85
PRPF40A-205ENST00000467114 TPCN2Q8NHX9 752 aa9.76□□□□□ -0.85
PRPF40A-205ENST00000467114 SPOCK3Q9BQ16 436 aa9.76□□□□□ -0.85
PRPF40A-205ENST00000467114 GPC6Q9Y625 555 aaPredicted RBP9.76□□□□□ -0.85
PRPF40A-205ENST00000467114 COL8A1P27658 744 aa9.75□□□□□ -0.85
PRPF40A-205ENST00000467114 CCDC102BQ68D86 513 aa9.75□□□□□ -0.85
PRPF40A-205ENST00000467114 M0R2N6 131 aa9.74□□□□□ -0.85
PRPF40A-205ENST00000467114 PROCP04070 461 aa9.74□□□□□ -0.85
PRPF40A-205ENST00000467114 DGKGP49619 791 aa9.74□□□□□ -0.85
PRPF40A-205ENST00000467114 TBCELQ5QJ74 424 aa9.74□□□□□ -0.85
PRPF40A-205ENST00000467114 ZNF468Q5VIY5 522 aaPredicted RBP9.74□□□□□ -0.85
PRPF40A-205ENST00000467114 FCHSD1Q86WN1 690 aa9.74□□□□□ -0.85
PRPF40A-205ENST00000467114 LARGE2Q8N3Y3 721 aa9.74□□□□□ -0.85
PRPF40A-205ENST00000467114 STRN4Q9NRL3 753 aa9.74□□□□□ -0.85
PRPF40A-205ENST00000467114 MARK1Q9P0L2 795 aa9.74□□□□□ -0.85
PRPF40A-205ENST00000467114 SERTM1A2A2V5 107 aa9.73□□□□□ -0.85
PRPF40A-205ENST00000467114 KRBA1A5PL33 1030 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms