RNA–Protein interactions for RNA: ENST00000467049.1

PTPDC1-203, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

TSL 2

Gene PTPDC1, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-203ENST00000467049 RNF181Q9P0P0 153 aa12.22□□□□□ -0.45
PTPDC1-203ENST00000467049 ZPR1O75312 459 aa12.21□□□□□ -0.45
PTPDC1-203ENST00000467049 DNAJC10Q8IXB1 793 aa12.21□□□□□ -0.45
PTPDC1-203ENST00000467049 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
PTPDC1-203ENST00000467049 DICER1Q9UPY3 1922 aaKnown RBP12.21□□□□□ -0.45
PTPDC1-203ENST00000467049 CHRNA5P30532 468 aa12.21□□□□□ -0.46
PTPDC1-203ENST00000467049 COL15A1P39059 1388 aa12.2□□□□□ -0.46
PTPDC1-203ENST00000467049 CYP19A1P11511 503 aaPredicted RBP12.2□□□□□ -0.46
PTPDC1-203ENST00000467049 USPL1Q5W0Q7 1092 aa12.2□□□□□ -0.46
PTPDC1-203ENST00000467049 JMYQ8N9B5 988 aa12.2□□□□□ -0.46
PTPDC1-203ENST00000467049 KLRG1Q96E93 195 aa12.2□□□□□ -0.46
PTPDC1-203ENST00000467049 NARFQ9UHQ1 456 aa12.2□□□□□ -0.46
PTPDC1-203ENST00000467049 KNSTRNQ9Y448 316 aa12.2□□□□□ -0.46
PTPDC1-203ENST00000467049 ANKRD31Q8N7Z5 1873 aa12.19□□□□□ -0.46
PTPDC1-203ENST00000467049 RNMTO43148 476 aaKnown RBP12.19□□□□□ -0.46
PTPDC1-203ENST00000467049 SCN7AQ01118 1682 aa12.19□□□□□ -0.46
PTPDC1-203ENST00000467049 SIPA1L3O60292 1781 aaPredicted RBP12.19□□□□□ -0.46
PTPDC1-203ENST00000467049 NFIXQ14938 502 aa12.19□□□□□ -0.46
PTPDC1-203ENST00000467049 VSIG10Q8N0Z9 540 aa12.19□□□□□ -0.46
PTPDC1-203ENST00000467049 RRAGCQ9HB90 399 aa12.19□□□□□ -0.46
PTPDC1-203ENST00000467049 SMC1BQ8NDV3 1235 aa12.18□□□□□ -0.46
PTPDC1-203ENST00000467049 LGR6Q9HBX8 967 aa12.18□□□□□ -0.46
PTPDC1-203ENST00000467049 FER1L6Q2WGJ9 1857 aa12.18□□□□□ -0.46
PTPDC1-203ENST00000467049 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
PTPDC1-203ENST00000467049 LMNB1P20700 586 aa12.17□□□□□ -0.46
PTPDC1-203ENST00000467049 RASSF7Q02833 373 aa12.17□□□□□ -0.46
PTPDC1-203ENST00000467049 BCL2L12Q9HB09 334 aa12.17□□□□□ -0.46
PTPDC1-203ENST00000467049 ZBTB1Q9Y2K1 713 aa12.17□□□□□ -0.46
PTPDC1-203ENST00000467049 ARFGEF2Q9Y6D5 1785 aa12.16□□□□□ -0.46
PTPDC1-203ENST00000467049 SERPINB2P05120 415 aa12.16□□□□□ -0.46
PTPDC1-203ENST00000467049 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
PTPDC1-203ENST00000467049 COL11A2P13942 1736 aaPredicted RBP12.16□□□□□ -0.46
PTPDC1-203ENST00000467049 A0A087WZG4 1122 aa12.15□□□□□ -0.46
PTPDC1-203ENST00000467049 TTLL6Q8N841 843 aa12.15□□□□□ -0.46
PTPDC1-203ENST00000467049 BCORQ6W2J9 1755 aa12.15□□□□□ -0.46
PTPDC1-203ENST00000467049 GLTPD2A6NH11 291 aa12.14□□□□□ -0.47
PTPDC1-203ENST00000467049 HTRA3P83110 453 aa12.14□□□□□ -0.47
PTPDC1-203ENST00000467049 C2CD5Q86YS7 1000 aa12.14□□□□□ -0.47
PTPDC1-203ENST00000467049 PDZRN3Q9UPQ7 1066 aa12.14□□□□□ -0.47
PTPDC1-203ENST00000467049 HMOX1P09601 288 aa12.14□□□□□ -0.47
PTPDC1-203ENST00000467049 VEGFAP15692 232 aaPredicted RBP12.14□□□□□ -0.47
PTPDC1-203ENST00000467049 CACNA1SQ13698 1873 aa12.14□□□□□ -0.47
PTPDC1-203ENST00000467049 MTHFSDQ2M296 383 aaKnown RBP12.14□□□□□ -0.47
PTPDC1-203ENST00000467049 CARMIL3Q8ND23 1372 aa12.14□□□□□ -0.47
PTPDC1-203ENST00000467049 H0YIN7 160 aa12.13□□□□□ -0.47
PTPDC1-203ENST00000467049 PRELPP51888 382 aa12.13□□□□□ -0.47
PTPDC1-203ENST00000467049 EIF5P55010 431 aaKnown RBP12.13□□□□□ -0.47
PTPDC1-203ENST00000467049 PCGF6Q9BYE7 350 aa12.13□□□□□ -0.47
PTPDC1-203ENST00000467049 COL3A1P02461 1466 aaPredicted RBP12.13□□□□□ -0.47
PTPDC1-203ENST00000467049 DIAPH1O60610 1272 aaKnown RBP12.12□□□□□ -0.47
PTPDC1-203ENST00000467049 STARD3NLO95772 234 aa12.12□□□□□ -0.47
PTPDC1-203ENST00000467049 NFKBIEO00221 500 aa12.12□□□□□ -0.47
PTPDC1-203ENST00000467049 HEG1Q9ULI3 1381 aa12.11□□□□□ -0.47
PTPDC1-203ENST00000467049 CANXP27824 592 aaKnown RBP12.11□□□□□ -0.47
PTPDC1-203ENST00000467049 TTC5Q8N0Z6 440 aa12.11□□□□□ -0.47
PTPDC1-203ENST00000467049 TEX13AQ9BXU3 409 aaPredicted RBP12.11□□□□□ -0.47
PTPDC1-203ENST00000467049 KIF7Q2M1P5 1343 aa12.11□□□□□ -0.47
PTPDC1-203ENST00000467049 SLX4Q8IY92 1834 aa12.1□□□□□ -0.47
PTPDC1-203ENST00000467049 PDE6BP35913 854 aa12.1□□□□□ -0.47
PTPDC1-203ENST00000467049 LTBP3Q9NS15 1303 aa12.1□□□□□ -0.47
PTPDC1-203ENST00000467049 COL13A1Q5TAT6 717 aaPredicted RBP12.1□□□□□ -0.47
PTPDC1-203ENST00000467049 GAS2L2Q8NHY3 880 aa12.1□□□□□ -0.47
PTPDC1-203ENST00000467049 BRIP1Q9BX63 1249 aa12.1□□□□□ -0.47
PTPDC1-203ENST00000467049 NPC1L1Q9UHC9 1359 aa12.09□□□□□ -0.47
PTPDC1-203ENST00000467049 PER1O15534 1290 aaPredicted RBP12.09□□□□□ -0.47
PTPDC1-203ENST00000467049 IL6STP40189 918 aaPredicted RBP12.09□□□□□ -0.47
PTPDC1-203ENST00000467049 TBC1D9BQ66K14 1250 aa12.09□□□□□ -0.47
PTPDC1-203ENST00000467049 SCN4AP35499 1836 aa12.09□□□□□ -0.47
PTPDC1-203ENST00000467049 TEFQ10587 303 aa12.08□□□□□ -0.48
PTPDC1-203ENST00000467049 PRR5LQ6MZQ0 368 aa12.08□□□□□ -0.48
PTPDC1-203ENST00000467049 DPY19L2Q6NUT2 758 aa12.08□□□□□ -0.48
PTPDC1-203ENST00000467049 BICDL1Q6ZP65 573 aa12.08□□□□□ -0.48
PTPDC1-203ENST00000467049 ZNF496Q96IT1 587 aaPredicted RBP12.08□□□□□ -0.48
PTPDC1-203ENST00000467049 GNAT3A8MTJ3 354 aa12.08□□□□□ -0.48
PTPDC1-203ENST00000467049 POTECB2RU33 542 aa12.08□□□□□ -0.48
PTPDC1-203ENST00000467049 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
PTPDC1-203ENST00000467049 ZNF622Q969S3 477 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTPDC1-203ENST00000467049 STYK1Q6J9G0 422 aa12.07□□□□□ -0.48
PTPDC1-203ENST00000467049 IL17REQ8NFR9 667 aa12.07□□□□□ -0.48
PTPDC1-203ENST00000467049 CEMIPQ8WUJ3 1361 aa12.07□□□□□ -0.48
PTPDC1-203ENST00000467049 SOGA3Q5TF21 947 aa12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 TNS4Q8IZW8 715 aa12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 CNKSR1Q969H4 720 aa12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 FMNL2Q96PY5 1086 aa12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 C21orf2O43822 256 aa12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 CAMTA2O94983 1202 aa12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 HSPA1AP0DMV8 641 aaKnown RBP12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 HSPA1BP0DMV9 641 aaKnown RBP12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 ERFEQ4G0M1 354 aa12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 CC2D1BQ5T0F9 858 aaKnown RBP12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 TAOK3Q9H2K8 898 aa12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
PTPDC1-203ENST00000467049 ST5P78524 1137 aa12.05□□□□□ -0.48
PTPDC1-203ENST00000467049 CNBD1Q8NA66 436 aa12.05□□□□□ -0.48
PTPDC1-203ENST00000467049 SETDB2Q96T68 719 aa12.05□□□□□ -0.48
PTPDC1-203ENST00000467049 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
PTPDC1-203ENST00000467049 NPM2Q86SE8 214 aaKnown RBP12.04□□□□□ -0.48
PTPDC1-203ENST00000467049 U2SURPO15042 1029 aaKnown RBP12.04□□□□□ -0.48
PTPDC1-203ENST00000467049 SRGNP10124 158 aa12.04□□□□□ -0.48
PTPDC1-203ENST00000467049 MASTLQ96GX5 879 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms