RNA–Protein interactions for RNA: ENST00000467041.1

SSR2-204, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-204ENST00000467041 GRIN3BO60391 1043 aa30■■■□□ 2.39
SSR2-204ENST00000467041 ZEB1P37275 1124 aaPredicted RBP30■■■□□ 2.39
SSR2-204ENST00000467041 FKBP8Q14318 412 aa30■■■□□ 2.39
SSR2-204ENST00000467041 PNNQ9H307 717 aaKnown RBP30■■■□□ 2.39
SSR2-204ENST00000467041 PARP3Q9Y6F1 533 aa30■■■□□ 2.39
SSR2-204ENST00000467041 ZPR1O75312 459 aa29.99■■■□□ 2.39
SSR2-204ENST00000467041 MYBBP1AQ9BQG0 1328 aaKnown RBP29.98■■■□□ 2.39
SSR2-204ENST00000467041 CANXP27824 592 aaKnown RBP29.98■■■□□ 2.39
SSR2-204ENST00000467041 COL15A1P39059 1388 aa29.98■■■□□ 2.39
SSR2-204ENST00000467041 USPL1Q5W0Q7 1092 aa29.97■■■□□ 2.39
SSR2-204ENST00000467041 NARFQ9UHQ1 456 aa29.97■■■□□ 2.39
SSR2-204ENST00000467041 EIF5P55010 431 aaKnown RBP29.95■■■□□ 2.39
SSR2-204ENST00000467041 NFE2L2Q16236 605 aa29.95■■■□□ 2.39
SSR2-204ENST00000467041 TM4SF1P30408 202 aa29.94■■■□□ 2.38
SSR2-204ENST00000467041 TGFB2P61812 414 aa29.94■■■□□ 2.38
SSR2-204ENST00000467041 TAF7Q15545 349 aaPredicted RBP29.94■■■□□ 2.38
SSR2-204ENST00000467041 C10orf71Q711Q0 1435 aa29.94■■■□□ 2.38
SSR2-204ENST00000467041 KIF13BQ9NQT8 1826 aa29.94■■■□□ 2.38
SSR2-204ENST00000467041 DDR1Q08345 913 aa29.93■■■□□ 2.38
SSR2-204ENST00000467041 MAPK8IP3Q9UPT6 1336 aa29.93■■■□□ 2.38
SSR2-204ENST00000467041 DLG5Q8TDM6 1919 aa29.91■■■□□ 2.38
SSR2-204ENST00000467041 A0A087WZG4 1122 aa29.91■■■□□ 2.38
SSR2-204ENST00000467041 BCL2L12Q9HB09 334 aa29.9■■■□□ 2.38
SSR2-204ENST00000467041 PXDNLA1KZ92 1463 aa29.89■■■□□ 2.38
SSR2-204ENST00000467041 POLRMTO00411 1230 aaKnown RBP29.89■■■□□ 2.38
SSR2-204ENST00000467041 A1BGP04217 495 aa29.89■■■□□ 2.38
SSR2-204ENST00000467041 SNRPA1P09661 255 aaKnown RBP29.89■■■□□ 2.38
SSR2-204ENST00000467041 IL6STP40189 918 aaPredicted RBP29.89■■■□□ 2.38
SSR2-204ENST00000467041 WWC3Q9ULE0 1092 aa29.89■■■□□ 2.38
SSR2-204ENST00000467041 USP16Q9Y5T5 823 aa29.89■■■□□ 2.38
SSR2-204ENST00000467041 ZNF784Q8NCA9 323 aaPredicted RBP29.88■■■□□ 2.37
SSR2-204ENST00000467041 PRKRIP1Q9H875 184 aaPredicted RBP29.88■■■□□ 2.37
SSR2-204ENST00000467041 A0A0G2JLW4 131 aa29.87■■■□□ 2.37
SSR2-204ENST00000467041 NFIXQ14938 502 aa29.87■■■□□ 2.37
SSR2-204ENST00000467041 MIS18AQ9NYP9 233 aa29.87■■■□□ 2.37
SSR2-204ENST00000467041 KIAA1551Q9HCM1 1747 aa29.86■■■□□ 2.37
SSR2-204ENST00000467041 PRAMEF22A3QJZ6 481 aa29.86■■■□□ 2.37
SSR2-204ENST00000467041 PNISRQ8TF01 805 aaKnown RBP29.86■■■□□ 2.37
SSR2-204ENST00000467041 DPEP1P16444 411 aa29.85■■■□□ 2.37
SSR2-204ENST00000467041 THUMPD2Q9BTF0 503 aaKnown RBP29.84■■■□□ 2.37
SSR2-204ENST00000467041 ZNF330Q9Y3S2 320 aaPredicted RBP29.84■■■□□ 2.37
SSR2-204ENST00000467041 N4BP2Q86UW6 1770 aaPredicted RBP29.83■■■□□ 2.37
SSR2-204ENST00000467041 TBC1D2BQ9UPU7 963 aa29.83■■■□□ 2.37
SSR2-204ENST00000467041 NPM2Q86SE8 214 aaKnown RBP29.82■■■□□ 2.36
SSR2-204ENST00000467041 RIPK4P57078 832 aa29.81■■■□□ 2.36
SSR2-204ENST00000467041 KCNA3P22001 575 aa29.8■■■□□ 2.36
SSR2-204ENST00000467041 SERPINB2P05120 415 aa29.79■■■□□ 2.36
SSR2-204ENST00000467041 TMPOP42166 694 aaKnown RBP29.79■■■□□ 2.36
SSR2-204ENST00000467041 WDR43Q15061 677 aaKnown RBP eCLIP29.79■■■□□ 2.36
SSR2-204ENST00000467041 BCS1LQ9Y276 419 aa29.79■■■□□ 2.36
SSR2-204ENST00000467041 PIP4K2AP48426 406 aaPredicted RBP29.78■■■□□ 2.36
SSR2-204ENST00000467041 BICDL1Q6ZP65 573 aa29.77■■■□□ 2.36
SSR2-204ENST00000467041 KDM3BQ7LBC6 1761 aa29.77■■■□□ 2.36
SSR2-204ENST00000467041 CAMTA2O94983 1202 aa29.76■■■□□ 2.35
SSR2-204ENST00000467041 EIF4A1P60842 406 aaKnown RBP29.76■■■□□ 2.35
SSR2-204ENST00000467041 TBC1D9BQ66K14 1250 aa29.76■■■□□ 2.35
SSR2-204ENST00000467041 DZIP3Q86Y13 1208 aaKnown RBP29.76■■■□□ 2.35
SSR2-204ENST00000467041 CCDC146Q8IYE0 955 aa29.76■■■□□ 2.35
SSR2-204ENST00000467041 PIM2Q9P1W9 311 aa29.76■■■□□ 2.35
SSR2-204ENST00000467041 ADAMTS8Q9UP79 889 aa29.76■■■□□ 2.35
SSR2-204ENST00000467041 AFDNP55196 1824 aaKnown RBP29.75■■■□□ 2.35
SSR2-204ENST00000467041 NBPF26B4DH59 902 aa29.75■■■□□ 2.35
SSR2-204ENST00000467041 GIGYF1O75420 1035 aaPredicted RBP29.75■■■□□ 2.35
SSR2-204ENST00000467041 NBPF10Q6P3W6 841 aaKnown RBP29.75■■■□□ 2.35
SSR2-204ENST00000467041 NBPF15Q8N660 670 aa29.75■■■□□ 2.35
SSR2-204ENST00000467041 RUNDC1Q96C34 613 aa29.75■■■□□ 2.35
SSR2-204ENST00000467041 NRXN2Q9P2S2 1712 aa29.75■■■□□ 2.35
SSR2-204ENST00000467041 LMOD3Q0VAK6 560 aa29.74■■■□□ 2.35
SSR2-204ENST00000467041 SCN7AQ01118 1682 aa29.74■■■□□ 2.35
SSR2-204ENST00000467041 BRCA1P38398 1863 aaKnown RBP29.74■■■□□ 2.35
SSR2-204ENST00000467041 CHRNA5P30532 468 aa29.73■■■□□ 2.35
SSR2-204ENST00000467041 RRP7AQ9Y3A4 280 aaKnown RBP29.72■■■□□ 2.35
SSR2-204ENST00000467041 NEUROD2Q15784 382 aa29.7■■■□□ 2.35
SSR2-204ENST00000467041 DALRD3Q5D0E6 543 aaKnown RBP29.7■■■□□ 2.35
SSR2-204ENST00000467041 BABAM1Q9NWV8 329 aa29.7■■■□□ 2.35
SSR2-204ENST00000467041 TSPYL4Q9UJ04 414 aa29.7■■■□□ 2.35
SSR2-204ENST00000467041 CLEC4GQ6UXB4 293 aa29.69■■■□□ 2.34
SSR2-204ENST00000467041 CARMIL3Q8ND23 1372 aa29.68■■■□□ 2.34
SSR2-204ENST00000467041 LAMB4A4D0S4 1761 aa29.68■■■□□ 2.34
SSR2-204ENST00000467041 SETDB2Q96T68 719 aa29.68■■■□□ 2.34
SSR2-204ENST00000467041 ZNF316A6NFI3 1004 aaPredicted RBP29.67■■■□□ 2.34
SSR2-204ENST00000467041 BCORQ6W2J9 1755 aa29.67■■■□□ 2.34
SSR2-204ENST00000467041 ARHGAP27Q6ZUM4 889 aa29.66■■■□□ 2.34
SSR2-204ENST00000467041 TRIM35Q9UPQ4 493 aa29.66■■■□□ 2.34
SSR2-204ENST00000467041 RGL2O15211 777 aa29.65■■■□□ 2.34
SSR2-204ENST00000467041 PRR5LQ6MZQ0 368 aa29.65■■■□□ 2.34
SSR2-204ENST00000467041 ZNF652Q9Y2D9 606 aa29.65■■■□□ 2.34
SSR2-204ENST00000467041 ADCY9O60503 1353 aa29.64■■■□□ 2.34
SSR2-204ENST00000467041 ARFGEF1Q9Y6D6 1849 aa29.64■■■□□ 2.33
SSR2-204ENST00000467041 ATP10DQ9P241 1426 aa29.63■■■□□ 2.33
SSR2-204ENST00000467041 C2CD5Q86YS7 1000 aa29.63■■■□□ 2.33
SSR2-204ENST00000467041 BRIP1Q9BX63 1249 aa29.63■■■□□ 2.33
SSR2-204ENST00000467041 H0YIN7 160 aa29.62■■■□□ 2.33
SSR2-204ENST00000467041 CNBD1Q8NA66 436 aa29.61■■■□□ 2.33
SSR2-204ENST00000467041 CHL1O00533 1208 aa29.6■■■□□ 2.33
SSR2-204ENST00000467041 PDE6BP35913 854 aa29.6■■■□□ 2.33
SSR2-204ENST00000467041 CCDC24Q8N4L8 307 aa29.6■■■□□ 2.33
SSR2-204ENST00000467041 PDZRN3Q9UPQ7 1066 aa29.6■■■□□ 2.33
SSR2-204ENST00000467041 NGEFQ8N5V2 710 aa29.59■■■□□ 2.33
SSR2-204ENST00000467041 ERBB4Q15303 1308 aa29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms