RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 PCDHGC4Q9Y5F7 938 aa8.95□□□□□ -0.98
CHMP2B-202ENST00000466696 USP17L5A8MUK1 530 aa8.94□□□□□ -0.98
CHMP2B-202ENST00000466696 ARSJQ5FYB0 599 aaPredicted RBP8.94□□□□□ -0.98
CHMP2B-202ENST00000466696 GALNT6Q8NCL4 622 aa8.94□□□□□ -0.98
CHMP2B-202ENST00000466696 DNAAF2Q9NVR5 837 aaKnown RBP8.94□□□□□ -0.98
CHMP2B-202ENST00000466696 CABP1Q9NZU7 370 aa8.94□□□□□ -0.98
CHMP2B-202ENST00000466696 IGHA1P01876 353 aa8.93□□□□□ -0.98
CHMP2B-202ENST00000466696 TRIM50Q86XT4 487 aa8.93□□□□□ -0.98
CHMP2B-202ENST00000466696 A0A1W2PNR3 127 aa8.92□□□□□ -0.98
CHMP2B-202ENST00000466696 C2CD2LO14523 706 aa8.92□□□□□ -0.98
CHMP2B-202ENST00000466696 ATXN7O15265 892 aaPredicted RBP8.92□□□□□ -0.98
CHMP2B-202ENST00000466696 CTBSQ01459 385 aa8.92□□□□□ -0.98
CHMP2B-202ENST00000466696 GPAT2Q6NUI2 795 aa8.92□□□□□ -0.98
CHMP2B-202ENST00000466696 DEPDC4Q8N2C3 294 aa8.92□□□□□ -0.98
CHMP2B-202ENST00000466696 EDARADDQ8WWZ3 215 aa8.92□□□□□ -0.98
CHMP2B-202ENST00000466696 ZNF358Q9NW07 568 aa8.92□□□□□ -0.98
CHMP2B-202ENST00000466696 SCHIP1Q9P0W5 487 aaPredicted RBP8.92□□□□□ -0.98
CHMP2B-202ENST00000466696 POM121CA8CG34 1229 aa8.91□□□□□ -0.98
CHMP2B-202ENST00000466696 SLCO4C1Q6ZQN7 724 aa8.91□□□□□ -0.98
CHMP2B-202ENST00000466696 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.91□□□□□ -0.98
CHMP2B-202ENST00000466696 USP3Q9Y6I4 520 aa8.91□□□□□ -0.98
CHMP2B-202ENST00000466696 SHISA8B8ZZ34 492 aa8.9□□□□□ -0.98
CHMP2B-202ENST00000466696 ATP1A2P50993 1020 aa8.9□□□□□ -0.98
CHMP2B-202ENST00000466696 HDGFL1Q5TGJ6 251 aa8.9□□□□□ -0.98
CHMP2B-202ENST00000466696 C1orf229Q6ZS94 237 aaPredicted RBP8.9□□□□□ -0.98
CHMP2B-202ENST00000466696 PLEKHM2Q8IWE5 1019 aa8.9□□□□□ -0.98
CHMP2B-202ENST00000466696 ADAMTS19Q8TE59 1207 aa8.9□□□□□ -0.98
CHMP2B-202ENST00000466696 GGA1Q9UJY5 639 aa8.9□□□□□ -0.98
CHMP2B-202ENST00000466696 GJA3Q9Y6H8 435 aa8.9□□□□□ -0.98
CHMP2B-202ENST00000466696 ARAFP10398 606 aa8.89□□□□□ -0.99
CHMP2B-202ENST00000466696 DCAF5Q96JK2 942 aa8.89□□□□□ -0.99
CHMP2B-202ENST00000466696 ZIC5Q96T25 663 aa8.89□□□□□ -0.99
CHMP2B-202ENST00000466696 MKL2Q9ULH7 1088 aa8.89□□□□□ -0.99
CHMP2B-202ENST00000466696 USP17L3A6NCW0 530 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 USP17L4A6NCW7 530 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 ATP9BO43861 1147 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 MAPTP10636 758 aaKnown RBP8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 TNP2Q05952 138 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 TEAD4Q15561 434 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 FAM182BQ5T319 152 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 USP17L2Q6R6M4 530 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 BICDL1Q6ZP65 573 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 USP17L1Q7RTZ2 530 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 RRAGCQ9HB90 399 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 PARP3Q9Y6F1 533 aa8.88□□□□□ -0.99
CHMP2B-202ENST00000466696 DCDC2BA2VCK2 349 aa8.87□□□□□ -0.99
CHMP2B-202ENST00000466696 KHNYNO15037 678 aaKnown RBP8.87□□□□□ -0.99
CHMP2B-202ENST00000466696 FAM157BP0CG42 384 aa8.87□□□□□ -0.99
CHMP2B-202ENST00000466696 AMPD1P23109 780 aa8.87□□□□□ -0.99
CHMP2B-202ENST00000466696 EPHA4P54764 986 aa8.87□□□□□ -0.99
CHMP2B-202ENST00000466696 SNRPNP63162 240 aaKnown RBP8.87□□□□□ -0.99
CHMP2B-202ENST00000466696 TMEM132AQ24JP5 1023 aa8.87□□□□□ -0.99
CHMP2B-202ENST00000466696 SAMD5Q5TGI4 173 aa8.87□□□□□ -0.99
CHMP2B-202ENST00000466696 L3MBTL2Q969R5 705 aa8.87□□□□□ -0.99
CHMP2B-202ENST00000466696 EPXP11678 715 aa8.86□□□□□ -0.99
CHMP2B-202ENST00000466696 NOS2P35228 1153 aa8.86□□□□□ -0.99
CHMP2B-202ENST00000466696 CCDC102BQ68D86 513 aa8.86□□□□□ -0.99
CHMP2B-202ENST00000466696 SLC9A9Q8IVB4 645 aa8.86□□□□□ -0.99
CHMP2B-202ENST00000466696 TPCN2Q8NHX9 752 aa8.86□□□□□ -0.99
CHMP2B-202ENST00000466696 ZDHHC1Q8WTX9 485 aa8.86□□□□□ -0.99
CHMP2B-202ENST00000466696 UCN2Q96RP3 112 aa8.86□□□□□ -0.99
CHMP2B-202ENST00000466696 AVENQ9NQS1 362 aaPredicted RBP8.86□□□□□ -0.99
CHMP2B-202ENST00000466696 PIK3R2O00459 728 aa8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 ZBTB7BO15156 539 aaPredicted RBP8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 CD33P20138 364 aa8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 ADH6P28332 368 aa8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 TXLNAP40222 546 aa8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 PLA2G4EQ3MJ16 856 aa8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 ALYREFQ86V81 257 aaKnown RBP8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 TNS4Q8IZW8 715 aa8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 LARGE2Q8N3Y3 721 aa8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 ZNF232Q9UNY5 417 aa8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 GPC6Q9Y625 555 aaPredicted RBP8.85□□□□□ -0.99
CHMP2B-202ENST00000466696 PALM3A6NDB9 673 aaPredicted RBP8.84□□□□□ -0.99
CHMP2B-202ENST00000466696 NEURL1BA8MQ27 555 aa8.84□□□□□ -0.99
CHMP2B-202ENST00000466696 CLDN10P78369 228 aa8.84□□□□□ -0.99
CHMP2B-202ENST00000466696 LAMC2Q13753 1193 aa8.84□□□□□ -0.99
CHMP2B-202ENST00000466696 SUZ12Q15022 739 aaKnown RBP8.84□□□□□ -0.99
CHMP2B-202ENST00000466696 MKRN1Q9UHC7 482 aaKnown RBP8.84□□□□□ -0.99
CHMP2B-202ENST00000466696 SERTM1A2A2V5 107 aa8.83□□□□□ -1
CHMP2B-202ENST00000466696 M0R2N6 131 aa8.83□□□□□ -1
CHMP2B-202ENST00000466696 EML1O00423 815 aa8.83□□□□□ -1
CHMP2B-202ENST00000466696 MSTNO14793 375 aa8.83□□□□□ -1
CHMP2B-202ENST00000466696 OGFOD1Q8N543 542 aa8.83□□□□□ -1
CHMP2B-202ENST00000466696 BTBD6Q96KE9 485 aa8.83□□□□□ -1
CHMP2B-202ENST00000466696 NEUROD4Q9HD90 331 aa8.83□□□□□ -1
CHMP2B-202ENST00000466696 MARK1Q9P0L2 795 aa8.83□□□□□ -1
CHMP2B-202ENST00000466696 PRR12Q9ULL5 1215 aa8.83□□□□□ -1
CHMP2B-202ENST00000466696 KIAA1024Q9UPX6 916 aa8.83□□□□□ -1
CHMP2B-202ENST00000466696 EFSO43281 561 aa8.82□□□□□ -1
CHMP2B-202ENST00000466696 TBCELQ5QJ74 424 aa8.82□□□□□ -1
CHMP2B-202ENST00000466696 PROSER2Q86WR7 435 aaPredicted RBP8.82□□□□□ -1
CHMP2B-202ENST00000466696 CLUAP1Q96AJ1 413 aa8.82□□□□□ -1
CHMP2B-202ENST00000466696 HCN2Q9UL51 889 aa8.82□□□□□ -1
CHMP2B-202ENST00000466696 CHMP3Q9Y3E7 222 aa8.82□□□□□ -1
CHMP2B-202ENST00000466696 RBM19Q9Y4C8 960 aaKnown RBP8.82□□□□□ -1
CHMP2B-202ENST00000466696 PSMA6P60900 246 aaKnown RBP8.81□□□□□ -1
CHMP2B-202ENST00000466696 ZNF468Q5VIY5 522 aaPredicted RBP8.81□□□□□ -1
CHMP2B-202ENST00000466696 SIX5Q8N196 739 aa8.81□□□□□ -1
CHMP2B-202ENST00000466696 FNBP4Q8N3X1 1017 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms