RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 FKBP8Q14318 412 aa22.14■■□□□ 1.13
SDHB-203ENST00000466613 MCM10Q7L590 875 aa22.14■■□□□ 1.13
SDHB-203ENST00000466613 FMNL2Q96PY5 1086 aa22.14■■□□□ 1.13
SDHB-203ENST00000466613 HTATSF1O43719 755 aaKnown RBP22.13■■□□□ 1.13
SDHB-203ENST00000466613 ZPR1O75312 459 aa22.13■■□□□ 1.13
SDHB-203ENST00000466613 NEFMP07197 916 aa22.13■■□□□ 1.13
SDHB-203ENST00000466613 TEX13AQ9BXU3 409 aaPredicted RBP22.13■■□□□ 1.13
SDHB-203ENST00000466613 PXDNLA1KZ92 1463 aa22.13■■□□□ 1.13
SDHB-203ENST00000466613 USPL1Q5W0Q7 1092 aa22.12■■□□□ 1.13
SDHB-203ENST00000466613 BRCA1P38398 1863 aaKnown RBP22.11■■□□□ 1.13
SDHB-203ENST00000466613 ZNF784Q8NCA9 323 aaPredicted RBP22.11■■□□□ 1.13
SDHB-203ENST00000466613 PLEKHF1Q96S99 279 aa22.11■■□□□ 1.13
SDHB-203ENST00000466613 NARFQ9UHQ1 456 aa22.11■■□□□ 1.13
SDHB-203ENST00000466613 KCNQ3O43525 872 aa22.1■■□□□ 1.13
SDHB-203ENST00000466613 CANXP27824 592 aaKnown RBP22.1■■□□□ 1.13
SDHB-203ENST00000466613 TGFB2P61812 414 aa22.1■■□□□ 1.13
SDHB-203ENST00000466613 DDR1Q08345 913 aa22.1■■□□□ 1.13
SDHB-203ENST00000466613 DCTN1Q14203 1278 aa22.1■■□□□ 1.13
SDHB-203ENST00000466613 AFDNP55196 1824 aaKnown RBP22.1■■□□□ 1.13
SDHB-203ENST00000466613 PNNQ9H307 717 aaKnown RBP22.09■■□□□ 1.13
SDHB-203ENST00000466613 SCN7AQ01118 1682 aa22.09■■□□□ 1.13
SDHB-203ENST00000466613 EIF5P55010 431 aaKnown RBP22.08■■□□□ 1.13
SDHB-203ENST00000466613 WWC3Q9ULE0 1092 aa22.08■■□□□ 1.13
SDHB-203ENST00000466613 NRXN2Q9P2S2 1712 aa22.08■■□□□ 1.12
SDHB-203ENST00000466613 MYBBP1AQ9BQG0 1328 aaKnown RBP22.07■■□□□ 1.12
SDHB-203ENST00000466613 KDM3BQ7LBC6 1761 aa22.07■■□□□ 1.12
SDHB-203ENST00000466613 TM4SF1P30408 202 aa22.07■■□□□ 1.12
SDHB-203ENST00000466613 MAPK8IP3Q9UPT6 1336 aa22.06■■□□□ 1.12
SDHB-203ENST00000466613 A0A087WZG4 1122 aa22.06■■□□□ 1.12
SDHB-203ENST00000466613 POLRMTO00411 1230 aaKnown RBP22.06■■□□□ 1.12
SDHB-203ENST00000466613 BCL2L12Q9HB09 334 aa22.06■■□□□ 1.12
SDHB-203ENST00000466613 LAMB4A4D0S4 1761 aa22.05■■□□□ 1.12
SDHB-203ENST00000466613 IL6STP40189 918 aaPredicted RBP22.05■■□□□ 1.12
SDHB-203ENST00000466613 NFE2L2Q16236 605 aa22.05■■□□□ 1.12
SDHB-203ENST00000466613 BCORQ6W2J9 1755 aa22.04■■□□□ 1.12
SDHB-203ENST00000466613 A0A0G2JLW4 131 aa22.04■■□□□ 1.12
SDHB-203ENST00000466613 TAF7Q15545 349 aaPredicted RBP22.04■■□□□ 1.12
SDHB-203ENST00000466613 ARFGEF1Q9Y6D6 1849 aa22.03■■□□□ 1.12
SDHB-203ENST00000466613 A1BGP04217 495 aa22.03■■□□□ 1.12
SDHB-203ENST00000466613 DPEP1P16444 411 aa22.03■■□□□ 1.12
SDHB-203ENST00000466613 NFIXQ14938 502 aa22.03■■□□□ 1.12
SDHB-203ENST00000466613 SNRPA1P09661 255 aaKnown RBP22.02■■□□□ 1.12
SDHB-203ENST00000466613 ZNF330Q9Y3S2 320 aaPredicted RBP22.02■■□□□ 1.12
SDHB-203ENST00000466613 USP16Q9Y5T5 823 aa22.02■■□□□ 1.12
SDHB-203ENST00000466613 PRAMEF22A3QJZ6 481 aa22.01■■□□□ 1.11
SDHB-203ENST00000466613 NPM2Q86SE8 214 aaKnown RBP22■■□□□ 1.11
SDHB-203ENST00000466613 BCS1LQ9Y276 419 aa22■■□□□ 1.11
SDHB-203ENST00000466613 KCNA3P22001 575 aa21.99■■□□□ 1.11
SDHB-203ENST00000466613 ZEB1P37275 1124 aaPredicted RBP21.99■■□□□ 1.11
SDHB-203ENST00000466613 PNISRQ8TF01 805 aaKnown RBP21.99■■□□□ 1.11
SDHB-203ENST00000466613 MIS18AQ9NYP9 233 aa21.99■■□□□ 1.11
SDHB-203ENST00000466613 TBC1D2BQ9UPU7 963 aa21.99■■□□□ 1.11
SDHB-203ENST00000466613 DLEC1Q9Y238 1755 aa21.99■■□□□ 1.11
SDHB-203ENST00000466613 THUMPD2Q9BTF0 503 aaKnown RBP21.98■■□□□ 1.11
SDHB-203ENST00000466613 SERPINB2P05120 415 aa21.97■■□□□ 1.11
SDHB-203ENST00000466613 PRKRIP1Q9H875 184 aaPredicted RBP21.97■■□□□ 1.11
SDHB-203ENST00000466613 ADCY9O60503 1353 aa21.97■■□□□ 1.11
SDHB-203ENST00000466613 PIP4K2AP48426 406 aaPredicted RBP21.96■■□□□ 1.11
SDHB-203ENST00000466613 TBC1D9BQ66K14 1250 aa21.96■■□□□ 1.11
SDHB-203ENST00000466613 BICDL1Q6ZP65 573 aa21.96■■□□□ 1.11
SDHB-203ENST00000466613 PIM2Q9P1W9 311 aa21.96■■□□□ 1.11
SDHB-203ENST00000466613 ATP10DQ9P241 1426 aa21.96■■□□□ 1.11
SDHB-203ENST00000466613 ANKRD31Q8N7Z5 1873 aa21.95■■□□□ 1.1
SDHB-203ENST00000466613 CAMTA2O94983 1202 aa21.95■■□□□ 1.1
SDHB-203ENST00000466613 CHRNA5P30532 468 aa21.95■■□□□ 1.1
SDHB-203ENST00000466613 RIPK4P57078 832 aa21.95■■□□□ 1.1
SDHB-203ENST00000466613 DZIP3Q86Y13 1208 aaKnown RBP21.94■■□□□ 1.1
SDHB-203ENST00000466613 CARMIL3Q8ND23 1372 aa21.94■■□□□ 1.1
SDHB-203ENST00000466613 TMPOP42166 694 aaKnown RBP21.93■■□□□ 1.1
SDHB-203ENST00000466613 WDR43Q15061 677 aaKnown RBP eCLIP21.93■■□□□ 1.1
SDHB-203ENST00000466613 DALRD3Q5D0E6 543 aaKnown RBP21.93■■□□□ 1.1
SDHB-203ENST00000466613 NBPF26B4DH59 902 aa21.92■■□□□ 1.1
SDHB-203ENST00000466613 EIF4A1P60842 406 aaKnown RBP21.92■■□□□ 1.1
SDHB-203ENST00000466613 LMOD3Q0VAK6 560 aa21.92■■□□□ 1.1
SDHB-203ENST00000466613 NBPF10Q6P3W6 841 aaKnown RBP21.92■■□□□ 1.1
SDHB-203ENST00000466613 CCDC146Q8IYE0 955 aa21.92■■□□□ 1.1
SDHB-203ENST00000466613 NBPF15Q8N660 670 aa21.92■■□□□ 1.1
SDHB-203ENST00000466613 GIGYF1O75420 1035 aaPredicted RBP21.91■■□□□ 1.1
SDHB-203ENST00000466613 ARHGAP27Q6ZUM4 889 aa21.9■■□□□ 1.1
SDHB-203ENST00000466613 SETDB2Q96T68 719 aa21.9■■□□□ 1.1
SDHB-203ENST00000466613 COL11A2P13942 1736 aaPredicted RBP21.89■■□□□ 1.1
SDHB-203ENST00000466613 CLEC4GQ6UXB4 293 aa21.89■■□□□ 1.09
SDHB-203ENST00000466613 RUNDC1Q96C34 613 aa21.89■■□□□ 1.09
SDHB-203ENST00000466613 TSPYL4Q9UJ04 414 aa21.89■■□□□ 1.09
SDHB-203ENST00000466613 PRR5LQ6MZQ0 368 aa21.88■■□□□ 1.09
SDHB-203ENST00000466613 ADAMTS8Q9UP79 889 aa21.88■■□□□ 1.09
SDHB-203ENST00000466613 ZNF652Q9Y2D9 606 aa21.88■■□□□ 1.09
SDHB-203ENST00000466613 RRP7AQ9Y3A4 280 aaKnown RBP21.88■■□□□ 1.09
SDHB-203ENST00000466613 RGL2O15211 777 aa21.87■■□□□ 1.09
SDHB-203ENST00000466613 C2CD5Q86YS7 1000 aa21.87■■□□□ 1.09
SDHB-203ENST00000466613 BABAM1Q9NWV8 329 aa21.87■■□□□ 1.09
SDHB-203ENST00000466613 SBF1O95248 1867 aa21.86■■□□□ 1.09
SDHB-203ENST00000466613 NUP98P52948 1817 aa21.86■■□□□ 1.09
SDHB-203ENST00000466613 H0YIN7 160 aa21.86■■□□□ 1.09
SDHB-203ENST00000466613 NEUROD2Q15784 382 aa21.86■■□□□ 1.09
SDHB-203ENST00000466613 CNBD1Q8NA66 436 aa21.86■■□□□ 1.09
SDHB-203ENST00000466613 BRIP1Q9BX63 1249 aa21.86■■□□□ 1.09
SDHB-203ENST00000466613 GPBP1L1Q9HC44 474 aaPredicted RBP21.85■■□□□ 1.09
SDHB-203ENST00000466613 PDZRN3Q9UPQ7 1066 aa21.85■■□□□ 1.09
SDHB-203ENST00000466613 PDE6BP35913 854 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms