RNA–Protein interactions for RNA: ENST00000466432.1

SRRT-207, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-207ENST00000466432 SCN7AQ01118 1682 aa17.74■□□□□ 0.43
SRRT-207ENST00000466432 USPL1Q5W0Q7 1092 aa17.73■□□□□ 0.43
SRRT-207ENST00000466432 COL15A1P39059 1388 aa17.73■□□□□ 0.43
SRRT-207ENST00000466432 FCHSD2O94868 740 aa17.72■□□□□ 0.43
SRRT-207ENST00000466432 CNGB1Q14028 1251 aaPredicted RBP17.72■□□□□ 0.43
SRRT-207ENST00000466432 VSIG10Q8N0Z9 540 aa17.72■□□□□ 0.43
SRRT-207ENST00000466432 ANKRD31Q8N7Z5 1873 aa17.71■□□□□ 0.43
SRRT-207ENST00000466432 HSPA6P17066 643 aa17.71■□□□□ 0.43
SRRT-207ENST00000466432 NARFQ9UHQ1 456 aa17.71■□□□□ 0.43
SRRT-207ENST00000466432 CHRNA5P30532 468 aa17.7■□□□□ 0.42
SRRT-207ENST00000466432 NFIXQ14938 502 aa17.7■□□□□ 0.42
SRRT-207ENST00000466432 ARHGAP27Q6ZUM4 889 aa17.7■□□□□ 0.42
SRRT-207ENST00000466432 IL17REQ8NFR9 667 aa17.7■□□□□ 0.42
SRRT-207ENST00000466432 PIM2Q9P1W9 311 aa17.7■□□□□ 0.42
SRRT-207ENST00000466432 CEMIPQ8WUJ3 1361 aa17.69■□□□□ 0.42
SRRT-207ENST00000466432 BCORQ6W2J9 1755 aa17.68■□□□□ 0.42
SRRT-207ENST00000466432 CARMIL3Q8ND23 1372 aa17.67■□□□□ 0.42
SRRT-207ENST00000466432 HEG1Q9ULI3 1381 aa17.67■□□□□ 0.42
SRRT-207ENST00000466432 ZPR1O75312 459 aa17.67■□□□□ 0.42
SRRT-207ENST00000466432 EIF5P55010 431 aaKnown RBP17.67■□□□□ 0.42
SRRT-207ENST00000466432 ZNF496Q96IT1 587 aaPredicted RBP17.67■□□□□ 0.42
SRRT-207ENST00000466432 NMRK2Q9NPI5 230 aa17.67■□□□□ 0.42
SRRT-207ENST00000466432 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
SRRT-207ENST00000466432 DALRD3Q5D0E6 543 aaKnown RBP17.66■□□□□ 0.42
SRRT-207ENST00000466432 C9orf131Q5VYM1 1079 aa17.66■□□□□ 0.42
SRRT-207ENST00000466432 TNRC6CQ9HCJ0 1690 aaKnown RBP17.66■□□□□ 0.42
SRRT-207ENST00000466432 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
SRRT-207ENST00000466432 ZNF790Q6PG37 636 aa17.65■□□□□ 0.42
SRRT-207ENST00000466432 PHACTR3Q96KR7 559 aa17.65■□□□□ 0.42
SRRT-207ENST00000466432 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
SRRT-207ENST00000466432 U2SURPO15042 1029 aaKnown RBP17.64■□□□□ 0.41
SRRT-207ENST00000466432 PRELPP51888 382 aa17.64■□□□□ 0.41
SRRT-207ENST00000466432 GAS2L2Q8NHY3 880 aa17.64■□□□□ 0.41
SRRT-207ENST00000466432 CCDC88AQ3V6T2 1871 aa17.63■□□□□ 0.41
SRRT-207ENST00000466432 TOMM70O94826 608 aa17.63■□□□□ 0.41
SRRT-207ENST00000466432 SERPINB2P05120 415 aa17.63■□□□□ 0.41
SRRT-207ENST00000466432 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
SRRT-207ENST00000466432 TIAM2Q8IVF5 1701 aa17.63■□□□□ 0.41
SRRT-207ENST00000466432 WDR90Q96KV7 1748 aa17.63■□□□□ 0.41
SRRT-207ENST00000466432 KCNQ3O43525 872 aa17.61■□□□□ 0.41
SRRT-207ENST00000466432 PRKAR2BP31323 418 aa17.61■□□□□ 0.41
SRRT-207ENST00000466432 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
SRRT-207ENST00000466432 STARD3NLO95772 234 aa17.6■□□□□ 0.41
SRRT-207ENST00000466432 RASSF7Q02833 373 aa17.6■□□□□ 0.41
SRRT-207ENST00000466432 TEFQ10587 303 aa17.6■□□□□ 0.41
SRRT-207ENST00000466432 TBC1D9BQ66K14 1250 aa17.6■□□□□ 0.41
SRRT-207ENST00000466432 RNF181Q9P0P0 153 aa17.6■□□□□ 0.41
SRRT-207ENST00000466432 ARFGEF2Q9Y6D5 1785 aa17.6■□□□□ 0.41
SRRT-207ENST00000466432 FER1L6Q2WGJ9 1857 aa17.6■□□□□ 0.41
SRRT-207ENST00000466432 IL6STP40189 918 aaPredicted RBP17.59■□□□□ 0.41
SRRT-207ENST00000466432 DNAJC5GQ8N7S2 189 aa17.59■□□□□ 0.41
SRRT-207ENST00000466432 A1BGP04217 495 aa17.58■□□□□ 0.4
SRRT-207ENST00000466432 PPP2R1AP30153 589 aa17.58■□□□□ 0.4
SRRT-207ENST00000466432 TEX13AQ9BXU3 409 aaPredicted RBP17.58■□□□□ 0.4
SRRT-207ENST00000466432 DLG5Q8TDM6 1919 aa17.58■□□□□ 0.4
SRRT-207ENST00000466432 DICER1Q9UPY3 1922 aaKnown RBP17.58■□□□□ 0.4
SRRT-207ENST00000466432 CACNA1SQ13698 1873 aa17.57■□□□□ 0.4
SRRT-207ENST00000466432 A0A087WZG4 1122 aa17.57■□□□□ 0.4
SRRT-207ENST00000466432 CAMTA2O94983 1202 aa17.57■□□□□ 0.4
SRRT-207ENST00000466432 RBM46Q8TBY0 533 aaKnown RBP17.57■□□□□ 0.4
SRRT-207ENST00000466432 FMNL2Q96PY5 1086 aa17.57■□□□□ 0.4
SRRT-207ENST00000466432 TBC1D2BQ9UPU7 963 aa17.57■□□□□ 0.4
SRRT-207ENST00000466432 LAMB4A4D0S4 1761 aa17.56■□□□□ 0.4
SRRT-207ENST00000466432 ZC3H4Q9UPT8 1303 aaKnown RBP17.56■□□□□ 0.4
SRRT-207ENST00000466432 NFKBIEO00221 500 aa17.56■□□□□ 0.4
SRRT-207ENST00000466432 APLP1P51693 650 aa17.56■□□□□ 0.4
SRRT-207ENST00000466432 PRR5LQ6MZQ0 368 aa17.56■□□□□ 0.4
SRRT-207ENST00000466432 BICDL1Q6ZP65 573 aa17.56■□□□□ 0.4
SRRT-207ENST00000466432 C2CD5Q86YS7 1000 aa17.56■□□□□ 0.4
SRRT-207ENST00000466432 PRAMEF22A3QJZ6 481 aa17.55■□□□□ 0.4
SRRT-207ENST00000466432 TTLL6Q8N841 843 aa17.55■□□□□ 0.4
SRRT-207ENST00000466432 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
SRRT-207ENST00000466432 SLX4Q8IY92 1834 aa17.55■□□□□ 0.4
SRRT-207ENST00000466432 KDM3BQ7LBC6 1761 aa17.55■□□□□ 0.4
SRRT-207ENST00000466432 KDM2BQ8NHM5 1336 aa17.54■□□□□ 0.4
SRRT-207ENST00000466432 BTBD11A6QL63 1104 aa17.54■□□□□ 0.4
SRRT-207ENST00000466432 ZEB1P37275 1124 aaPredicted RBP17.54■□□□□ 0.4
SRRT-207ENST00000466432 CFAP53Q96M91 514 aa17.54■□□□□ 0.4
SRRT-207ENST00000466432 LMNB1P20700 586 aa17.53■□□□□ 0.4
SRRT-207ENST00000466432 IFFO2Q5TF58 517 aa17.53■□□□□ 0.4
SRRT-207ENST00000466432 BRIP1Q9BX63 1249 aa17.53■□□□□ 0.4
SRRT-207ENST00000466432 H0YIN7 160 aa17.52■□□□□ 0.4
SRRT-207ENST00000466432 PIP4K2AP48426 406 aaPredicted RBP17.52■□□□□ 0.4
SRRT-207ENST00000466432 MCM10Q7L590 875 aa17.52■□□□□ 0.4
SRRT-207ENST00000466432 CCDC24Q8N4L8 307 aa17.52■□□□□ 0.4
SRRT-207ENST00000466432 RRAGCQ9HB90 399 aa17.52■□□□□ 0.4
SRRT-207ENST00000466432 U2AF1L5P0DN76 240 aaPredicted RBP17.51■□□□□ 0.39
SRRT-207ENST00000466432 U2AF1Q01081 240 aaKnown RBP eCLIP17.51■□□□□ 0.39
SRRT-207ENST00000466432 FSTL1Q12841 308 aa17.51■□□□□ 0.39
SRRT-207ENST00000466432 DCTN1Q14203 1278 aa17.51■□□□□ 0.39
SRRT-207ENST00000466432 NUDCQ9Y266 331 aa17.51■□□□□ 0.39
SRRT-207ENST00000466432 GLTPD2A6NH11 291 aa17.5■□□□□ 0.39
SRRT-207ENST00000466432 NBPF26B4DH59 902 aa17.5■□□□□ 0.39
SRRT-207ENST00000466432 NBPF10Q6P3W6 841 aaKnown RBP17.5■□□□□ 0.39
SRRT-207ENST00000466432 DZIP3Q86Y13 1208 aaKnown RBP17.5■□□□□ 0.39
SRRT-207ENST00000466432 NBPF15Q8N660 670 aa17.5■□□□□ 0.39
SRRT-207ENST00000466432 PDZRN3Q9UPQ7 1066 aa17.5■□□□□ 0.39
SRRT-207ENST00000466432 ZNF330Q9Y3S2 320 aaPredicted RBP17.5■□□□□ 0.39
SRRT-207ENST00000466432 POTECB2RU33 542 aa17.49■□□□□ 0.39
SRRT-207ENST00000466432 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms