RNA–Protein interactions for RNA: ENST00000466353.1

PLXNB1-209, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 626 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-209ENST00000466353 USPL1Q5W0Q7 1092 aa24.81■■□□□ 1.56
PLXNB1-209ENST00000466353 PARP3Q9Y6F1 533 aa24.81■■□□□ 1.56
PLXNB1-209ENST00000466353 NFE2L2Q16236 605 aa24.8■■□□□ 1.56
PLXNB1-209ENST00000466353 TEX13AQ9BXU3 409 aaPredicted RBP24.8■■□□□ 1.56
PLXNB1-209ENST00000466353 WWC3Q9ULE0 1092 aa24.8■■□□□ 1.56
PLXNB1-209ENST00000466353 ZPR1O75312 459 aa24.79■■□□□ 1.56
PLXNB1-209ENST00000466353 PNNQ9H307 717 aaKnown RBP24.79■■□□□ 1.56
PLXNB1-209ENST00000466353 NARFQ9UHQ1 456 aa24.79■■□□□ 1.56
PLXNB1-209ENST00000466353 COL15A1P39059 1388 aa24.79■■□□□ 1.56
PLXNB1-209ENST00000466353 TM4SF1P30408 202 aa24.78■■□□□ 1.56
PLXNB1-209ENST00000466353 EIF5P55010 431 aaKnown RBP24.78■■□□□ 1.56
PLXNB1-209ENST00000466353 DDR1Q08345 913 aa24.78■■□□□ 1.56
PLXNB1-209ENST00000466353 TAF7Q15545 349 aaPredicted RBP24.78■■□□□ 1.56
PLXNB1-209ENST00000466353 MIS18AQ9NYP9 233 aa24.78■■□□□ 1.56
PLXNB1-209ENST00000466353 USP16Q9Y5T5 823 aa24.78■■□□□ 1.56
PLXNB1-209ENST00000466353 PRAMEF22A3QJZ6 481 aa24.77■■□□□ 1.56
PLXNB1-209ENST00000466353 A1BGP04217 495 aa24.77■■□□□ 1.56
PLXNB1-209ENST00000466353 BCL2L12Q9HB09 334 aa24.77■■□□□ 1.56
PLXNB1-209ENST00000466353 GRIN3BO60391 1043 aa24.76■■□□□ 1.55
PLXNB1-209ENST00000466353 THUMPD2Q9BTF0 503 aaKnown RBP24.76■■□□□ 1.55
PLXNB1-209ENST00000466353 PRKRIP1Q9H875 184 aaPredicted RBP24.76■■□□□ 1.55
PLXNB1-209ENST00000466353 MAPK8IP3Q9UPT6 1336 aa24.76■■□□□ 1.55
PLXNB1-209ENST00000466353 A0A0G2JLW4 131 aa24.74■■□□□ 1.55
PLXNB1-209ENST00000466353 C10orf71Q711Q0 1435 aa24.74■■□□□ 1.55
PLXNB1-209ENST00000466353 POLRMTO00411 1230 aaKnown RBP24.73■■□□□ 1.55
PLXNB1-209ENST00000466353 TGFB2P61812 414 aa24.73■■□□□ 1.55
PLXNB1-209ENST00000466353 NFIXQ14938 502 aa24.73■■□□□ 1.55
PLXNB1-209ENST00000466353 PXDNLA1KZ92 1463 aa24.72■■□□□ 1.55
PLXNB1-209ENST00000466353 SNRPA1P09661 255 aaKnown RBP24.72■■□□□ 1.55
PLXNB1-209ENST00000466353 IL6STP40189 918 aaPredicted RBP24.72■■□□□ 1.55
PLXNB1-209ENST00000466353 ZNF330Q9Y3S2 320 aaPredicted RBP24.72■■□□□ 1.55
PLXNB1-209ENST00000466353 A0A087WZG4 1122 aa24.71■■□□□ 1.55
PLXNB1-209ENST00000466353 DPEP1P16444 411 aa24.71■■□□□ 1.55
PLXNB1-209ENST00000466353 PIP4K2AP48426 406 aaPredicted RBP24.71■■□□□ 1.55
PLXNB1-209ENST00000466353 TBC1D2BQ9UPU7 963 aa24.71■■□□□ 1.55
PLXNB1-209ENST00000466353 DLG5Q8TDM6 1919 aa24.71■■□□□ 1.55
PLXNB1-209ENST00000466353 RIPK4P57078 832 aa24.7■■□□□ 1.54
PLXNB1-209ENST00000466353 CCDC146Q8IYE0 955 aa24.7■■□□□ 1.54
PLXNB1-209ENST00000466353 ZNF784Q8NCA9 323 aaPredicted RBP24.7■■□□□ 1.54
PLXNB1-209ENST00000466353 KIF13BQ9NQT8 1826 aa24.69■■□□□ 1.54
PLXNB1-209ENST00000466353 KIAA1551Q9HCM1 1747 aa24.69■■□□□ 1.54
PLXNB1-209ENST00000466353 KCNA3P22001 575 aa24.68■■□□□ 1.54
PLXNB1-209ENST00000466353 TMPOP42166 694 aaKnown RBP24.68■■□□□ 1.54
PLXNB1-209ENST00000466353 PNISRQ8TF01 805 aaKnown RBP24.68■■□□□ 1.54
PLXNB1-209ENST00000466353 CHD4Q14839 1912 aa24.68■■□□□ 1.54
PLXNB1-209ENST00000466353 BICDL1Q6ZP65 573 aa24.67■■□□□ 1.54
PLXNB1-209ENST00000466353 ADAMTS8Q9UP79 889 aa24.67■■□□□ 1.54
PLXNB1-209ENST00000466353 RRP7AQ9Y3A4 280 aaKnown RBP24.67■■□□□ 1.54
PLXNB1-209ENST00000466353 SERPINB2P05120 415 aa24.66■■□□□ 1.54
PLXNB1-209ENST00000466353 UTRNP46939 3433 aa24.66■■□□□ 1.54
PLXNB1-209ENST00000466353 N4BP2Q86UW6 1770 aaPredicted RBP24.65■■□□□ 1.54
PLXNB1-209ENST00000466353 NBPF26B4DH59 902 aa24.65■■□□□ 1.54
PLXNB1-209ENST00000466353 EIF4A1P60842 406 aaKnown RBP24.65■■□□□ 1.54
PLXNB1-209ENST00000466353 WDR43Q15061 677 aaKnown RBP eCLIP24.65■■□□□ 1.54
PLXNB1-209ENST00000466353 TBC1D9BQ66K14 1250 aa24.65■■□□□ 1.54
PLXNB1-209ENST00000466353 NBPF10Q6P3W6 841 aaKnown RBP24.65■■□□□ 1.54
PLXNB1-209ENST00000466353 NBPF15Q8N660 670 aa24.65■■□□□ 1.54
PLXNB1-209ENST00000466353 BCS1LQ9Y276 419 aa24.65■■□□□ 1.54
PLXNB1-209ENST00000466353 GIGYF1O75420 1035 aaPredicted RBP24.63■■□□□ 1.53
PLXNB1-209ENST00000466353 CAMTA2O94983 1202 aa24.63■■□□□ 1.53
PLXNB1-209ENST00000466353 CHRNA5P30532 468 aa24.63■■□□□ 1.53
PLXNB1-209ENST00000466353 NEUROD2Q15784 382 aa24.63■■□□□ 1.53
PLXNB1-209ENST00000466353 NPM2Q86SE8 214 aaKnown RBP24.63■■□□□ 1.53
PLXNB1-209ENST00000466353 RUNDC1Q96C34 613 aa24.63■■□□□ 1.53
PLXNB1-209ENST00000466353 DZIP3Q86Y13 1208 aaKnown RBP24.62■■□□□ 1.53
PLXNB1-209ENST00000466353 ZNF316A6NFI3 1004 aaPredicted RBP24.61■■□□□ 1.53
PLXNB1-209ENST00000466353 KDM3BQ7LBC6 1761 aa24.6■■□□□ 1.53
PLXNB1-209ENST00000466353 PIM2Q9P1W9 311 aa24.59■■□□□ 1.53
PLXNB1-209ENST00000466353 TSPYL4Q9UJ04 414 aa24.59■■□□□ 1.53
PLXNB1-209ENST00000466353 LMOD3Q0VAK6 560 aa24.58■■□□□ 1.53
PLXNB1-209ENST00000466353 TRIM35Q9UPQ4 493 aa24.58■■□□□ 1.53
PLXNB1-209ENST00000466353 GOLGB1Q14789 3259 aaKnown RBP24.58■■□□□ 1.52
PLXNB1-209ENST00000466353 AFDNP55196 1824 aaKnown RBP24.57■■□□□ 1.52
PLXNB1-209ENST00000466353 CCDC184Q52MB2 194 aa24.57■■□□□ 1.52
PLXNB1-209ENST00000466353 NRXN2Q9P2S2 1712 aa24.57■■□□□ 1.52
PLXNB1-209ENST00000466353 CARMIL3Q8ND23 1372 aa24.56■■□□□ 1.52
PLXNB1-209ENST00000466353 CCDC24Q8N4L8 307 aa24.56■■□□□ 1.52
PLXNB1-209ENST00000466353 SCN7AQ01118 1682 aa24.56■■□□□ 1.52
PLXNB1-209ENST00000466353 DALRD3Q5D0E6 543 aaKnown RBP24.55■■□□□ 1.52
PLXNB1-209ENST00000466353 ARHGAP27Q6ZUM4 889 aa24.55■■□□□ 1.52
PLXNB1-209ENST00000466353 SETDB2Q96T68 719 aa24.55■■□□□ 1.52
PLXNB1-209ENST00000466353 NGEFQ8N5V2 710 aa24.54■■□□□ 1.52
PLXNB1-209ENST00000466353 BABAM1Q9NWV8 329 aa24.54■■□□□ 1.52
PLXNB1-209ENST00000466353 PRR5LQ6MZQ0 368 aa24.53■■□□□ 1.52
PLXNB1-209ENST00000466353 CLEC4GQ6UXB4 293 aa24.53■■□□□ 1.52
PLXNB1-209ENST00000466353 BRCA1P38398 1863 aaKnown RBP24.52■■□□□ 1.52
PLXNB1-209ENST00000466353 HLFQ16534 295 aa24.52■■□□□ 1.52
PLXNB1-209ENST00000466353 C2CD5Q86YS7 1000 aa24.52■■□□□ 1.52
PLXNB1-209ENST00000466353 CHL1O00533 1208 aa24.51■■□□□ 1.51
PLXNB1-209ENST00000466353 LAMB4A4D0S4 1761 aa24.5■■□□□ 1.51
PLXNB1-209ENST00000466353 APAF1O14727 1248 aa24.5■■□□□ 1.51
PLXNB1-209ENST00000466353 MYL6BP14649 208 aa24.5■■□□□ 1.51
PLXNB1-209ENST00000466353 BRIP1Q9BX63 1249 aa24.5■■□□□ 1.51
PLXNB1-209ENST00000466353 ZNF652Q9Y2D9 606 aa24.5■■□□□ 1.51
PLXNB1-209ENST00000466353 LAS1LQ9Y4W2 734 aaKnown RBP24.5■■□□□ 1.51
PLXNB1-209ENST00000466353 ATP10DQ9P241 1426 aa24.5■■□□□ 1.51
PLXNB1-209ENST00000466353 BCORQ6W2J9 1755 aa24.49■■□□□ 1.51
PLXNB1-209ENST00000466353 H0YIN7 160 aa24.49■■□□□ 1.51
PLXNB1-209ENST00000466353 EIF2S2P20042 333 aaKnown RBP24.49■■□□□ 1.51
PLXNB1-209ENST00000466353 TTLL7Q6ZT98 887 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms