RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 VAC14Q08AM6 782 aa5.47□□□□□ -1.53
CCDC93-205ENST00000466171 UBAP2LQ14157 1087 aaKnown RBP5.47□□□□□ -1.53
CCDC93-205ENST00000466171 NBPF1Q3BBV0 1214 aa5.47□□□□□ -1.53
CCDC93-205ENST00000466171 TSGA10IPQ3SY00 556 aa5.47□□□□□ -1.53
CCDC93-205ENST00000466171 FOXD4L6Q3SYB3 417 aaPredicted RBP5.47□□□□□ -1.53
CCDC93-205ENST00000466171 FOXD4L3Q6VB84 417 aaPredicted RBP5.47□□□□□ -1.53
CCDC93-205ENST00000466171 NOP53Q9NZM5 478 aaKnown RBP5.47□□□□□ -1.53
CCDC93-205ENST00000466171 GGA1Q9UJY5 639 aa5.47□□□□□ -1.53
CCDC93-205ENST00000466171 PCDHGC4Q9Y5F7 938 aa5.47□□□□□ -1.53
CCDC93-205ENST00000466171 GJA3Q9Y6H8 435 aa5.47□□□□□ -1.53
CCDC93-205ENST00000466171 ATXN7O15265 892 aaPredicted RBP5.46□□□□□ -1.54
CCDC93-205ENST00000466171 ARAFP10398 606 aa5.46□□□□□ -1.54
CCDC93-205ENST00000466171 ABL2P42684 1182 aa5.46□□□□□ -1.54
CCDC93-205ENST00000466171 SMTNP53814 917 aa5.46□□□□□ -1.54
CCDC93-205ENST00000466171 IRF5Q13568 498 aa5.46□□□□□ -1.54
CCDC93-205ENST00000466171 GRIN2CQ14957 1233 aa5.46□□□□□ -1.54
CCDC93-205ENST00000466171 ARSJQ5FYB0 599 aaPredicted RBP5.46□□□□□ -1.54
CCDC93-205ENST00000466171 PLPP7Q8NBV4 271 aa5.46□□□□□ -1.54
CCDC93-205ENST00000466171 ZCCHC2Q9C0B9 1178 aaKnown RBP5.46□□□□□ -1.54
CCDC93-205ENST00000466171 CHIC2Q9UKJ5 165 aa5.46□□□□□ -1.54
CCDC93-205ENST00000466171 GNB5O14775 395 aa5.45□□□□□ -1.54
CCDC93-205ENST00000466171 CTBSQ01459 385 aa5.45□□□□□ -1.54
CCDC93-205ENST00000466171 C1orf229Q6ZS94 237 aaPredicted RBP5.45□□□□□ -1.54
CCDC93-205ENST00000466171 WWC1Q8IX03 1113 aa5.45□□□□□ -1.54
CCDC93-205ENST00000466171 GDPD2Q9HCC8 539 aa5.45□□□□□ -1.54
CCDC93-205ENST00000466171 NDFIP2Q9NV92 336 aa5.45□□□□□ -1.54
CCDC93-205ENST00000466171 NEURL1BA8MQ27 555 aa5.44□□□□□ -1.54
CCDC93-205ENST00000466171 C2CD2LO14523 706 aa5.44□□□□□ -1.54
CCDC93-205ENST00000466171 BACH1O14867 736 aa5.44□□□□□ -1.54
CCDC93-205ENST00000466171 STAU1O95793 577 aaKnown RBP5.44□□□□□ -1.54
CCDC93-205ENST00000466171 ADH6P28332 368 aa5.44□□□□□ -1.54
CCDC93-205ENST00000466171 SCNN1DP51172 638 aa5.44□□□□□ -1.54
CCDC93-205ENST00000466171 BTBD6Q96KE9 485 aa5.44□□□□□ -1.54
CCDC93-205ENST00000466171 AVENQ9NQS1 362 aaPredicted RBP5.44□□□□□ -1.54
CCDC93-205ENST00000466171 CABP1Q9NZU7 370 aa5.44□□□□□ -1.54
CCDC93-205ENST00000466171 A0A1W2PNR3 127 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 DCDC2BA2VCK2 349 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 CDK2AP1O14519 115 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 KHNYNO15037 678 aaKnown RBP5.43□□□□□ -1.54
CCDC93-205ENST00000466171 EPXP11678 715 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 EML3Q32P44 896 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 TPRNQ4KMQ1 711 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 FAM182BQ5T319 152 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 BICDL1Q6ZP65 573 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 SEMA6BQ9H3T3 888 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 GOLGA2P5Q9HBQ8 144 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 ZDHHC3Q9NYG2 299 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 SERTAD1Q9UHV2 236 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 PRR12Q9ULL5 1215 aa5.43□□□□□ -1.54
CCDC93-205ENST00000466171 SCO2A0A1W2PP80 73 aa5.42□□□□□ -1.54
CCDC93-205ENST00000466171 A6NJY4 79 aa5.42□□□□□ -1.54
CCDC93-205ENST00000466171 C1QTNF9BB2RNN3 333 aa5.42□□□□□ -1.54
CCDC93-205ENST00000466171 LZTS3O60299 673 aaPredicted RBP5.42□□□□□ -1.54
CCDC93-205ENST00000466171 MAPTP10636 758 aaKnown RBP5.42□□□□□ -1.54
CCDC93-205ENST00000466171 ATP4AP20648 1035 aa5.42□□□□□ -1.54
CCDC93-205ENST00000466171 CHRNA4P43681 627 aa5.42□□□□□ -1.54
CCDC93-205ENST00000466171 LINC00114Q6XXX2 140 aa5.42□□□□□ -1.54
CCDC93-205ENST00000466171 SLC4A9Q96Q91 983 aa5.42□□□□□ -1.54
CCDC93-205ENST00000466171 DNAAF2Q9NVR5 837 aaKnown RBP5.42□□□□□ -1.54
CCDC93-205ENST00000466171 NOD1Q9Y239 953 aa5.42□□□□□ -1.54
CCDC93-205ENST00000466171 TNP2Q05952 138 aa5.41□□□□□ -1.54
CCDC93-205ENST00000466171 PSME1Q06323 249 aa5.41□□□□□ -1.54
CCDC93-205ENST00000466171 MTFR1Q15390 333 aa5.41□□□□□ -1.54
CCDC93-205ENST00000466171 CHSY3Q70JA7 882 aa5.41□□□□□ -1.54
CCDC93-205ENST00000466171 CD163Q86VB7 1156 aa5.41□□□□□ -1.54
CCDC93-205ENST00000466171 SUV39H2Q9H5I1 410 aa5.41□□□□□ -1.54
CCDC93-205ENST00000466171 NEUROD4Q9HD90 331 aa5.41□□□□□ -1.54
CCDC93-205ENST00000466171 FAM157BP0CG42 384 aa5.4□□□□□ -1.54
CCDC93-205ENST00000466171 SKIP12755 728 aa5.4□□□□□ -1.54
CCDC93-205ENST00000466171 CD33P20138 364 aa5.4□□□□□ -1.54
CCDC93-205ENST00000466171 DGKGP49619 791 aa5.4□□□□□ -1.54
CCDC93-205ENST00000466171 LAMC2Q13753 1193 aa5.4□□□□□ -1.54
CCDC93-205ENST00000466171 ZIC5Q96T25 663 aa5.4□□□□□ -1.54
CCDC93-205ENST00000466171 MARK1Q9P0L2 795 aa5.4□□□□□ -1.54
CCDC93-205ENST00000466171 SPDYE3A6NKU9 549 aa5.39□□□□□ -1.55
CCDC93-205ENST00000466171 TMEM229AB2RXF0 380 aa5.39□□□□□ -1.55
CCDC93-205ENST00000466171 ALAS2P22557 587 aa5.39□□□□□ -1.55
CCDC93-205ENST00000466171 DOC2BQ14184 412 aa5.39□□□□□ -1.55
CCDC93-205ENST00000466171 SAMD5Q5TGI4 173 aa5.39□□□□□ -1.55
CCDC93-205ENST00000466171 HOXB4P17483 251 aaPredicted RBP5.38□□□□□ -1.55
CCDC93-205ENST00000466171 GTF2IP78347 998 aa5.38□□□□□ -1.55
CCDC93-205ENST00000466171 ZNF468Q5VIY5 522 aaPredicted RBP5.38□□□□□ -1.55
CCDC93-205ENST00000466171 IQSEC3Q9UPP2 1182 aaPredicted RBP5.38□□□□□ -1.55
CCDC93-205ENST00000466171 PCDHGA11Q9Y5H2 935 aa5.38□□□□□ -1.55
CCDC93-205ENST00000466171 GPC6Q9Y625 555 aaPredicted RBP5.38□□□□□ -1.55
CCDC93-205ENST00000466171 RAD21O60216 631 aa5.37□□□□□ -1.55
CCDC93-205ENST00000466171 PCBP4P57723 403 aaKnown RBP5.37□□□□□ -1.55
CCDC93-205ENST00000466171 NEUROD1Q13562 356 aa5.37□□□□□ -1.55
CCDC93-205ENST00000466171 MCM6Q14566 821 aa5.37□□□□□ -1.55
CCDC93-205ENST00000466171 FCHSD1Q86WN1 690 aa5.37□□□□□ -1.55
CCDC93-205ENST00000466171 TRIM50Q86XT4 487 aa5.37□□□□□ -1.55
CCDC93-205ENST00000466171 NFATC2IPQ8NCF5 419 aa5.37□□□□□ -1.55
CCDC93-205ENST00000466171 SCHIP1Q9P0W5 487 aaPredicted RBP5.37□□□□□ -1.55
CCDC93-205ENST00000466171 ZNF232Q9UNY5 417 aa5.37□□□□□ -1.55
CCDC93-205ENST00000466171 CHMP3Q9Y3E7 222 aa5.37□□□□□ -1.55
CCDC93-205ENST00000466171 ELOA3CA0A087WX78 387 aaPredicted RBP5.36□□□□□ -1.55
CCDC93-205ENST00000466171 ELOA3DA6NLF2 546 aaPredicted RBP5.36□□□□□ -1.55
CCDC93-205ENST00000466171 SPATA31C1P0DKV0 1188 aa5.36□□□□□ -1.55
CCDC93-205ENST00000466171 NCOA4Q13772 614 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms