RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 RHPN1Q8TCX5 695 aa19.93■□□□□ 0.78
SLX4-202ENST00000466154 OSBPL3Q9H4L5 887 aa19.93■□□□□ 0.78
SLX4-202ENST00000466154 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
SLX4-202ENST00000466154 PA2G4Q9UQ80 394 aaKnown RBP19.93■□□□□ 0.78
SLX4-202ENST00000466154 SLC39A6Q13433 755 aa19.92■□□□□ 0.78
SLX4-202ENST00000466154 TMX3Q96JJ7 454 aa19.92■□□□□ 0.78
SLX4-202ENST00000466154 MAP3K2Q9Y2U5 619 aa19.92■□□□□ 0.78
SLX4-202ENST00000466154 CWC27Q6UX04 472 aaKnown RBP19.92■□□□□ 0.78
SLX4-202ENST00000466154 AXIN2Q9Y2T1 843 aa19.91■□□□□ 0.78
SLX4-202ENST00000466154 PIP4K2AP48426 406 aaPredicted RBP19.91■□□□□ 0.78
SLX4-202ENST00000466154 PROSER2Q86WR7 435 aaPredicted RBP19.91■□□□□ 0.78
SLX4-202ENST00000466154 NLRP2Q9NX02 1062 aa19.91■□□□□ 0.78
SLX4-202ENST00000466154 MYL6BP14649 208 aa19.91■□□□□ 0.78
SLX4-202ENST00000466154 TRIM44Q96DX7 344 aaPredicted RBP19.91■□□□□ 0.78
SLX4-202ENST00000466154 AKAP4Q5JQC9 854 aa19.9■□□□□ 0.78
SLX4-202ENST00000466154 RBM27Q9P2N5 1060 aaKnown RBP19.9■□□□□ 0.78
SLX4-202ENST00000466154 SPG7Q9UQ90 795 aa19.9■□□□□ 0.78
SLX4-202ENST00000466154 DDX54Q8TDD1 881 aaKnown RBP19.89■□□□□ 0.78
SLX4-202ENST00000466154 SIL1Q9H173 461 aa19.89■□□□□ 0.78
SLX4-202ENST00000466154 CSB-PGBD3P0DP91 1061 aa19.89■□□□□ 0.77
SLX4-202ENST00000466154 BEND3Q5T5X7 828 aa19.89■□□□□ 0.77
SLX4-202ENST00000466154 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
SLX4-202ENST00000466154 RNMTO43148 476 aaKnown RBP19.89■□□□□ 0.77
SLX4-202ENST00000466154 SSH3Q8TE77 659 aa19.89■□□□□ 0.77
SLX4-202ENST00000466154 KRT28Q7Z3Y7 464 aa19.88■□□□□ 0.77
SLX4-202ENST00000466154 KIF1BPQ96EK5 621 aa19.87■□□□□ 0.77
SLX4-202ENST00000466154 CABLES1Q8TDN4 633 aa19.87■□□□□ 0.77
SLX4-202ENST00000466154 DBF4Q9UBU7 674 aaPredicted RBP19.87■□□□□ 0.77
SLX4-202ENST00000466154 SALL3Q9BXA9 1300 aa19.87■□□□□ 0.77
SLX4-202ENST00000466154 CWC22Q9HCG8 908 aaKnown RBP19.87■□□□□ 0.77
SLX4-202ENST00000466154 NWD1Q149M9 1564 aa19.87■□□□□ 0.77
SLX4-202ENST00000466154 CPA1P15085 419 aa19.86■□□□□ 0.77
SLX4-202ENST00000466154 KIAA1211Q6ZU35 1233 aa19.86■□□□□ 0.77
SLX4-202ENST00000466154 PTMSP20962 102 aa19.85■□□□□ 0.77
SLX4-202ENST00000466154 GDPD2Q9HCC8 539 aa19.85■□□□□ 0.77
SLX4-202ENST00000466154 ZDHHC9Q9Y397 364 aa19.85■□□□□ 0.77
SLX4-202ENST00000466154 ARHGEF25Q86VW2 580 aa19.85■□□□□ 0.77
SLX4-202ENST00000466154 CCDC9Q9Y3X0 531 aaKnown RBP19.85■□□□□ 0.77
SLX4-202ENST00000466154 KLHL40Q2TBA0 621 aa19.84■□□□□ 0.77
SLX4-202ENST00000466154 BABAM1Q9NWV8 329 aa19.84■□□□□ 0.77
SLX4-202ENST00000466154 IFIT2P09913 472 aaKnown RBP19.84■□□□□ 0.77
SLX4-202ENST00000466154 CHRNA2Q15822 529 aa19.84■□□□□ 0.77
SLX4-202ENST00000466154 CNTROBQ8N137 903 aa19.84■□□□□ 0.77
SLX4-202ENST00000466154 CLASRPQ8N2M8 674 aaKnown RBP19.84■□□□□ 0.77
SLX4-202ENST00000466154 KLHDC4Q8TBB5 520 aa19.84■□□□□ 0.77
SLX4-202ENST00000466154 RAB11FIP3O75154 756 aa19.83■□□□□ 0.77
SLX4-202ENST00000466154 NASPP49321 788 aaPredicted RBP19.83■□□□□ 0.77
SLX4-202ENST00000466154 AMOTQ4VCS5 1084 aa19.83■□□□□ 0.77
SLX4-202ENST00000466154 RIC3Q7Z5B4 369 aa19.83■□□□□ 0.77
SLX4-202ENST00000466154 RAPGEF4Q8WZA2 1011 aa19.83■□□□□ 0.77
SLX4-202ENST00000466154 ANP32BQ92688 251 aaKnown RBP19.83■□□□□ 0.77
SLX4-202ENST00000466154 DIAPH3Q9NSV4 1193 aa19.83■□□□□ 0.77
SLX4-202ENST00000466154 LMBRD1Q9NUN5 540 aa19.83■□□□□ 0.77
SLX4-202ENST00000466154 CEMIPQ8WUJ3 1361 aa19.83■□□□□ 0.77
SLX4-202ENST00000466154 GIGYF1O75420 1035 aaPredicted RBP19.83■□□□□ 0.77
SLX4-202ENST00000466154 STAP2Q9UGK3 403 aa19.83■□□□□ 0.77
SLX4-202ENST00000466154 AACSQ86V21 672 aa19.82■□□□□ 0.76
SLX4-202ENST00000466154 CCDC8Q9H0W5 538 aaPredicted RBP19.82■□□□□ 0.76
SLX4-202ENST00000466154 ADCY9O60503 1353 aa19.82■□□□□ 0.76
SLX4-202ENST00000466154 XRN1Q8IZH2 1706 aaKnown RBP19.82■□□□□ 0.76
SLX4-202ENST00000466154 KCNJ4P48050 445 aa19.81■□□□□ 0.76
SLX4-202ENST00000466154 PI4K2BQ8TCG2 481 aa19.81■□□□□ 0.76
SLX4-202ENST00000466154 POLA2Q14181 598 aa19.81■□□□□ 0.76
SLX4-202ENST00000466154 ZSCAN23Q3MJ62 389 aa19.81■□□□□ 0.76
SLX4-202ENST00000466154 NFATC2IPQ8NCF5 419 aa19.81■□□□□ 0.76
SLX4-202ENST00000466154 PXDNQ92626 1479 aa19.8■□□□□ 0.76
SLX4-202ENST00000466154 NAP1L5Q96NT1 182 aaPredicted RBP19.8■□□□□ 0.76
SLX4-202ENST00000466154 NSFL1CQ9UNZ2 370 aaKnown RBP19.8■□□□□ 0.76
SLX4-202ENST00000466154 UBE2Q2Q8WVN8 375 aa19.8■□□□□ 0.76
SLX4-202ENST00000466154 CYP2E1P05181 493 aaPredicted RBP19.79■□□□□ 0.76
SLX4-202ENST00000466154 KSR2Q6VAB6 950 aa19.79■□□□□ 0.76
SLX4-202ENST00000466154 GPT2Q8TD30 523 aa19.79■□□□□ 0.76
SLX4-202ENST00000466154 RNF214Q8ND24 703 aa19.79■□□□□ 0.76
SLX4-202ENST00000466154 LTN1O94822 1766 aa19.79■□□□□ 0.76
SLX4-202ENST00000466154 HSP90AB4PQ58FF6 505 aa19.78■□□□□ 0.76
SLX4-202ENST00000466154 RASEFQ8IZ41 740 aa19.78■□□□□ 0.76
SLX4-202ENST00000466154 SUCLG2Q96I99 432 aa19.78■□□□□ 0.76
SLX4-202ENST00000466154 BICC1Q9H694 974 aaKnown RBP19.78■□□□□ 0.76
SLX4-202ENST00000466154 FAM208AQ9UK61 1670 aaKnown RBP19.78■□□□□ 0.76
SLX4-202ENST00000466154 SYCE3A1L190 88 aa19.78■□□□□ 0.76
SLX4-202ENST00000466154 G3BP1Q13283 466 aaKnown RBP eCLIP19.78■□□□□ 0.76
SLX4-202ENST00000466154 ADGRL3Q9HAR2 1447 aa19.77■□□□□ 0.76
SLX4-202ENST00000466154 CASTP20810 708 aaKnown RBP19.77■□□□□ 0.76
SLX4-202ENST00000466154 MCM2P49736 904 aa19.77■□□□□ 0.75
SLX4-202ENST00000466154 PRPF40BQ6NWY9 871 aaKnown RBP19.77■□□□□ 0.75
SLX4-202ENST00000466154 CHMP4AQ9BY43 222 aa19.77■□□□□ 0.75
SLX4-202ENST00000466154 SGSM2O43147 1006 aa19.76■□□□□ 0.75
SLX4-202ENST00000466154 DDX58O95786 925 aaKnown RBP19.76■□□□□ 0.75
SLX4-202ENST00000466154 MYD88Q99836 296 aa19.76■□□□□ 0.75
SLX4-202ENST00000466154 BOLA2Q9H3K6 86 aa19.76■□□□□ 0.75
SLX4-202ENST00000466154 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.76■□□□□ 0.75
SLX4-202ENST00000466154 HOXB7P09629 217 aa19.76■□□□□ 0.75
SLX4-202ENST00000466154 PRIM1P49642 420 aaKnown RBP19.76■□□□□ 0.75
SLX4-202ENST00000466154 SNX14Q9Y5W7 946 aa19.76■□□□□ 0.75
SLX4-202ENST00000466154 GRM8O00222 908 aa19.76■□□□□ 0.75
SLX4-202ENST00000466154 GLRX3O76003 335 aaKnown RBP19.76■□□□□ 0.75
SLX4-202ENST00000466154 ATF3P18847 181 aa19.75■□□□□ 0.75
SLX4-202ENST00000466154 HSPA4P34932 840 aa19.75■□□□□ 0.75
SLX4-202ENST00000466154 XAGE3Q8WTP9 111 aa19.75■□□□□ 0.75
SLX4-202ENST00000466154 GPATCH3Q96I76 525 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms