RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 CDCA7Q9BWT1 371 aaPredicted RBP9.47□□□□□ -0.89
LRCH3-211ENST00000466054 CD33P20138 364 aa9.46□□□□□ -0.9
LRCH3-211ENST00000466054 AVENQ9NQS1 362 aaPredicted RBP9.46□□□□□ -0.9
LRCH3-211ENST00000466054 GJA3Q9Y6H8 435 aa9.46□□□□□ -0.9
LRCH3-211ENST00000466054 KHNYNO15037 678 aaKnown RBP9.45□□□□□ -0.9
LRCH3-211ENST00000466054 USP4Q13107 963 aa9.45□□□□□ -0.9
LRCH3-211ENST00000466054 ZFP64Q9NPA5 681 aa9.45□□□□□ -0.9
LRCH3-211ENST00000466054 ALAS2P22557 587 aa9.44□□□□□ -0.9
LRCH3-211ENST00000466054 TRIM11Q96F44 468 aa9.44□□□□□ -0.9
LRCH3-211ENST00000466054 CCDC85AQ96PX6 553 aaPredicted RBP9.44□□□□□ -0.9
LRCH3-211ENST00000466054 NIFKQ9BYG3 293 aaKnown RBP9.44□□□□□ -0.9
LRCH3-211ENST00000466054 DOLKQ9UPQ8 538 aa9.44□□□□□ -0.9
LRCH3-211ENST00000466054 NDUFB9Q9Y6M9 179 aa9.44□□□□□ -0.9
LRCH3-211ENST00000466054 APBB1O00213 710 aa9.43□□□□□ -0.9
LRCH3-211ENST00000466054 MAPTP10636 758 aaKnown RBP9.43□□□□□ -0.9
LRCH3-211ENST00000466054 PCBP4P57723 403 aaKnown RBP9.43□□□□□ -0.9
LRCH3-211ENST00000466054 RSPO4Q2I0M5 234 aaPredicted RBP9.43□□□□□ -0.9
LRCH3-211ENST00000466054 NBPF1Q3BBV0 1214 aa9.43□□□□□ -0.9
LRCH3-211ENST00000466054 FCHSD1Q86WN1 690 aa9.43□□□□□ -0.9
LRCH3-211ENST00000466054 ETNK1Q9HBU6 452 aa9.43□□□□□ -0.9
LRCH3-211ENST00000466054 CEP126Q9P2H0 1117 aa9.43□□□□□ -0.9
LRCH3-211ENST00000466054 FAM182BQ5T319 152 aa9.42□□□□□ -0.9
LRCH3-211ENST00000466054 DNAAF2Q9NVR5 837 aaKnown RBP9.42□□□□□ -0.9
LRCH3-211ENST00000466054 A0A1W2PNR3 127 aa9.41□□□□□ -0.9
LRCH3-211ENST00000466054 TATP17735 454 aaPredicted RBP9.41□□□□□ -0.9
LRCH3-211ENST00000466054 SIRT1Q96EB6 747 aa9.41□□□□□ -0.9
LRCH3-211ENST00000466054 GOPCQ9HD26 462 aa9.41□□□□□ -0.9
LRCH3-211ENST00000466054 STAU1O95793 577 aaKnown RBP9.4□□□□□ -0.9
LRCH3-211ENST00000466054 ATP4AP20648 1035 aa9.4□□□□□ -0.9
LRCH3-211ENST00000466054 TNP2Q05952 138 aa9.4□□□□□ -0.9
LRCH3-211ENST00000466054 OXLD1Q5BKU9 147 aa9.4□□□□□ -0.9
LRCH3-211ENST00000466054 ARTNQ5T4W7 220 aa9.4□□□□□ -0.9
LRCH3-211ENST00000466054 ZNF468Q5VIY5 522 aaPredicted RBP9.4□□□□□ -0.9
LRCH3-211ENST00000466054 TPSG1Q9NRR2 321 aa9.4□□□□□ -0.9
LRCH3-211ENST00000466054 KLF15Q9UIH9 416 aa9.4□□□□□ -0.9
LRCH3-211ENST00000466054 SLFNL1Q499Z3 407 aa9.39□□□□□ -0.91
LRCH3-211ENST00000466054 NACC1Q96RE7 527 aa9.39□□□□□ -0.91
LRCH3-211ENST00000466054 DYRK3O43781 588 aa9.38□□□□□ -0.91
LRCH3-211ENST00000466054 NKAPLQ5M9Q1 402 aa9.38□□□□□ -0.91
LRCH3-211ENST00000466054 ELOA3CA0A087WX78 387 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-211ENST00000466054 ELOA3DA6NLF2 546 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-211ENST00000466054 BRPF1P55201 1214 aaPredicted RBP9.37□□□□□ -0.91
LRCH3-211ENST00000466054 ELOA3BQ3SY89 546 aa9.37□□□□□ -0.91
LRCH3-211ENST00000466054 ELOA3Q8NG57 546 aa9.37□□□□□ -0.91
LRCH3-211ENST00000466054 GDF10P55107 478 aa9.36□□□□□ -0.91
LRCH3-211ENST00000466054 NEUROD2Q15784 382 aa9.36□□□□□ -0.91
LRCH3-211ENST00000466054 FOXD4L6Q3SYB3 417 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-211ENST00000466054 LCE3BQ5TA77 95 aa9.36□□□□□ -0.91
LRCH3-211ENST00000466054 FOXD4L3Q6VB84 417 aaPredicted RBP9.36□□□□□ -0.91
LRCH3-211ENST00000466054 BICDL1Q6ZP65 573 aa9.36□□□□□ -0.91
LRCH3-211ENST00000466054 MARK1Q9P0L2 795 aa9.36□□□□□ -0.91
LRCH3-211ENST00000466054 FAM157BP0CG42 384 aa9.35□□□□□ -0.91
LRCH3-211ENST00000466054 EIF4G2P78344 907 aaKnown RBP eCLIP9.35□□□□□ -0.91
LRCH3-211ENST00000466054 TRIM28Q13263 835 aaKnown RBP9.35□□□□□ -0.91
LRCH3-211ENST00000466054 INHAP05111 366 aa9.34□□□□□ -0.91
LRCH3-211ENST00000466054 PRSS36Q5K4E3 855 aa9.34□□□□□ -0.91
LRCH3-211ENST00000466054 FAM229AH3BQW9 127 aa9.33□□□□□ -0.92
LRCH3-211ENST00000466054 SMTNP53814 917 aa9.33□□□□□ -0.92
LRCH3-211ENST00000466054 BANK1Q8NDB2 785 aa9.33□□□□□ -0.92
LRCH3-211ENST00000466054 LAMC2Q13753 1193 aa9.32□□□□□ -0.92
LRCH3-211ENST00000466054 SYT9Q86SS6 491 aa9.32□□□□□ -0.92
LRCH3-211ENST00000466054 ZDHHC3Q9NYG2 299 aa9.32□□□□□ -0.92
LRCH3-211ENST00000466054 CABP1Q9NZU7 370 aa9.32□□□□□ -0.92
LRCH3-211ENST00000466054 SERTAD1Q9UHV2 236 aa9.32□□□□□ -0.92
LRCH3-211ENST00000466054 BTBD11A6QL63 1104 aa9.31□□□□□ -0.92
LRCH3-211ENST00000466054 M0R082 166 aa9.31□□□□□ -0.92
LRCH3-211ENST00000466054 TSGA10IPQ3SY00 556 aa9.31□□□□□ -0.92
LRCH3-211ENST00000466054 ZNF417Q8TAU3 575 aa9.31□□□□□ -0.92
LRCH3-211ENST00000466054 ZNF587Q96SQ5 575 aaPredicted RBP9.31□□□□□ -0.92
LRCH3-211ENST00000466054 NEUROD4Q9HD90 331 aa9.31□□□□□ -0.92
LRCH3-211ENST00000466054 SOCS7O14512 581 aa9.3□□□□□ -0.92
LRCH3-211ENST00000466054 SCNN1DP51172 638 aa9.3□□□□□ -0.92
LRCH3-211ENST00000466054 MTMR14Q8NCE2 650 aa9.3□□□□□ -0.92
LRCH3-211ENST00000466054 ZIC5Q96T25 663 aa9.3□□□□□ -0.92
LRCH3-211ENST00000466054 NEUROD1Q13562 356 aa9.29□□□□□ -0.92
LRCH3-211ENST00000466054 LRP8Q14114 963 aa9.29□□□□□ -0.92
LRCH3-211ENST00000466054 SAMD5Q5TGI4 173 aa9.29□□□□□ -0.92
LRCH3-211ENST00000466054 PRM3Q9NNZ6 103 aa9.29□□□□□ -0.92
LRCH3-211ENST00000466054 HCN2Q9UL51 889 aa9.29□□□□□ -0.92
LRCH3-211ENST00000466054 GPR37L1O60883 481 aa9.28□□□□□ -0.92
LRCH3-211ENST00000466054 IL27Q8NEV9 243 aa9.28□□□□□ -0.92
LRCH3-211ENST00000466054 STRN4Q9NRL3 753 aa9.28□□□□□ -0.92
LRCH3-211ENST00000466054 SIN3BO75182 1162 aa9.27□□□□□ -0.93
LRCH3-211ENST00000466054 GRIK4Q16099 956 aa9.27□□□□□ -0.93
LRCH3-211ENST00000466054 TMEM132AQ24JP5 1023 aa9.27□□□□□ -0.93
LRCH3-211ENST00000466054 A6NJY4 79 aa9.26□□□□□ -0.93
LRCH3-211ENST00000466054 CDK2AP1O14519 115 aa9.26□□□□□ -0.93
LRCH3-211ENST00000466054 KRTAP4-12Q9BQ66 201 aa9.26□□□□□ -0.93
LRCH3-211ENST00000466054 C9orf172C9J069 976 aa9.25□□□□□ -0.93
LRCH3-211ENST00000466054 TRAPPC3LQ5T215 181 aa9.25□□□□□ -0.93
LRCH3-211ENST00000466054 PHTF2Q8N3S3 785 aa9.25□□□□□ -0.93
LRCH3-211ENST00000466054 PARP3Q9Y6F1 533 aa9.25□□□□□ -0.93
LRCH3-211ENST00000466054 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
LRCH3-211ENST00000466054 EFSO43281 561 aa9.24□□□□□ -0.93
LRCH3-211ENST00000466054 H2AFB1P0C5Y9 115 aa9.24□□□□□ -0.93
LRCH3-211ENST00000466054 H2AFB2P0C5Z0 115 aa9.24□□□□□ -0.93
LRCH3-211ENST00000466054 LRRC69Q6ZNQ3 347 aa9.24□□□□□ -0.93
LRCH3-211ENST00000466054 PRDM6Q9NQX0 595 aa9.24□□□□□ -0.93
LRCH3-211ENST00000466054 MAP7D1Q3KQU3 841 aa9.23□□□□□ -0.93
LRCH3-211ENST00000466054 SNRKQ9NRH2 765 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms