RNA–Protein interactions for RNA: ENST00000466045.1

CDHR3-203, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-203ENST00000466045 C21orf2O43822 256 aa11.28□□□□□ -0.6
CDHR3-203ENST00000466045 TPM4P67936 248 aa11.28□□□□□ -0.6
CDHR3-203ENST00000466045 PPP2R5AQ15172 486 aa11.28□□□□□ -0.6
CDHR3-203ENST00000466045 NEK11Q8NG66 645 aa11.28□□□□□ -0.6
CDHR3-203ENST00000466045 ZBTB7CA1YPR0 619 aa11.28□□□□□ -0.6
CDHR3-203ENST00000466045 FBXO38Q6PIJ6 1188 aa11.28□□□□□ -0.6
CDHR3-203ENST00000466045 PPM1EQ8WY54 764 aa11.28□□□□□ -0.6
CDHR3-203ENST00000466045 RBM27Q9P2N5 1060 aaKnown RBP11.28□□□□□ -0.6
CDHR3-203ENST00000466045 LRRFIP2Q9Y608 721 aaKnown RBP11.28□□□□□ -0.6
CDHR3-203ENST00000466045 HSPA2P54652 639 aa11.27□□□□□ -0.6
CDHR3-203ENST00000466045 CCDC112Q8NEF3 446 aa11.27□□□□□ -0.6
CDHR3-203ENST00000466045 FAM212AQ96EL1 285 aa11.27□□□□□ -0.6
CDHR3-203ENST00000466045 UBXN6Q9BZV1 441 aa11.27□□□□□ -0.6
CDHR3-203ENST00000466045 ZBTB12Q9Y330 459 aaPredicted RBP11.27□□□□□ -0.6
CDHR3-203ENST00000466045 H0YHG0 523 aa11.27□□□□□ -0.61
CDHR3-203ENST00000466045 TNNT1P13805 278 aa11.27□□□□□ -0.61
CDHR3-203ENST00000466045 SARNPP82979 210 aaKnown RBP11.27□□□□□ -0.61
CDHR3-203ENST00000466045 KCNF1Q9H3M0 494 aa11.27□□□□□ -0.61
CDHR3-203ENST00000466045 PYCARDQ9ULZ3 195 aa11.27□□□□□ -0.61
CDHR3-203ENST00000466045 ASXL1Q8IXJ9 1541 aa11.27□□□□□ -0.61
CDHR3-203ENST00000466045 SPATA31D1Q6ZQQ2 1576 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 COQ9O75208 318 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 IRX1P78414 480 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-203ENST00000466045 IDI1Q13907 227 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 RNF214Q8ND24 703 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 FHOD1Q9Y613 1164 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 LMTK3Q96Q04 1460 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 MYO3AQ8NEV4 1616 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 NOS1P29475 1434 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 ADCY5O95622 1261 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 H2AFXP16104 143 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-203ENST00000466045 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 ZNF513Q8N8E2 541 aaPredicted RBP11.26□□□□□ -0.61
CDHR3-203ENST00000466045 GAS2L2Q8NHY3 880 aa11.26□□□□□ -0.61
CDHR3-203ENST00000466045 NRXN1Q9ULB1 1477 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 IPO7O95373 1038 aaKnown RBP11.25□□□□□ -0.61
CDHR3-203ENST00000466045 SLFN5Q08AF3 891 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 ERO1AQ96HE7 468 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 USP25Q9UHP3 1055 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 STAG3Q9UJ98 1225 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 PIK3C2GO75747 1445 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 HTATSF1O43719 755 aaKnown RBP11.25□□□□□ -0.61
CDHR3-203ENST00000466045 ERCC3P19447 782 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 PLA2G4AP47712 749 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 E2F4Q16254 413 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 STAG1Q8WVM7 1258 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 SYAP1Q96A49 352 aaPredicted RBP11.25□□□□□ -0.61
CDHR3-203ENST00000466045 PAIP2Q9BPZ3 127 aaKnown RBP11.25□□□□□ -0.61
CDHR3-203ENST00000466045 RPS6KL1Q9Y6S9 549 aa11.25□□□□□ -0.61
CDHR3-203ENST00000466045 IVLP07476 585 aa11.24□□□□□ -0.61
CDHR3-203ENST00000466045 NAA30Q147X3 362 aaPredicted RBP11.24□□□□□ -0.61
CDHR3-203ENST00000466045 CCDC96Q2M329 555 aa11.24□□□□□ -0.61
CDHR3-203ENST00000466045 THEMISQ8N1K5 641 aaPredicted RBP11.24□□□□□ -0.61
CDHR3-203ENST00000466045 ATP8B1O43520 1251 aa11.24□□□□□ -0.61
CDHR3-203ENST00000466045 RPS6KA5O75582 802 aa11.24□□□□□ -0.61
CDHR3-203ENST00000466045 JAKMIP3Q5VZ66 844 aa11.24□□□□□ -0.61
CDHR3-203ENST00000466045 MKL1Q969V6 931 aa11.24□□□□□ -0.61
CDHR3-203ENST00000466045 FAXDC2Q96IV6 333 aa11.24□□□□□ -0.61
CDHR3-203ENST00000466045 TEX13AQ9BXU3 409 aaPredicted RBP11.24□□□□□ -0.61
CDHR3-203ENST00000466045 A2ML1A8K2U0 1454 aa11.23□□□□□ -0.61
CDHR3-203ENST00000466045 SETBP1Q9Y6X0 1596 aa11.23□□□□□ -0.61
CDHR3-203ENST00000466045 SGSM2O43147 1006 aa11.23□□□□□ -0.61
CDHR3-203ENST00000466045 PRPF40AO75400 957 aaKnown RBP11.23□□□□□ -0.61
CDHR3-203ENST00000466045 PPP2R1AP30153 589 aa11.23□□□□□ -0.61
CDHR3-203ENST00000466045 NUCKS1Q9H1E3 243 aaKnown RBP11.23□□□□□ -0.61
CDHR3-203ENST00000466045 CWC22Q9HCG8 908 aaKnown RBP11.23□□□□□ -0.61
CDHR3-203ENST00000466045 ADGRB3O60242 1522 aa11.23□□□□□ -0.61
CDHR3-203ENST00000466045 UGGT1Q9NYU2 1555 aa11.23□□□□□ -0.61
CDHR3-203ENST00000466045 PREX1Q8TCU6 1659 aa11.23□□□□□ -0.61
CDHR3-203ENST00000466045 PNMA6AP0CW24 399 aaPredicted RBP11.23□□□□□ -0.61
CDHR3-203ENST00000466045 NEFHP12036 1026 aa11.23□□□□□ -0.61
CDHR3-203ENST00000466045 TATDN2Q93075 761 aa11.23□□□□□ -0.61
CDHR3-203ENST00000466045 SMARCE1Q969G3 411 aa11.23□□□□□ -0.61
CDHR3-203ENST00000466045 ZSCAN16Q9H4T2 348 aaPredicted RBP11.23□□□□□ -0.61
CDHR3-203ENST00000466045 SBNO2Q9Y2G9 1366 aa11.22□□□□□ -0.61
CDHR3-203ENST00000466045 CD2BP2O95400 341 aaKnown RBP11.22□□□□□ -0.61
CDHR3-203ENST00000466045 CHGAP10645 457 aaKnown RBP11.22□□□□□ -0.61
CDHR3-203ENST00000466045 CORO7P57737 925 aa11.22□□□□□ -0.61
CDHR3-203ENST00000466045 A1CFQ9NQ94 594 aaKnown RBP11.22□□□□□ -0.61
CDHR3-203ENST00000466045 PPLO60437 1756 aa11.22□□□□□ -0.61
CDHR3-203ENST00000466045 SETDB1Q15047 1291 aa11.21□□□□□ -0.61
CDHR3-203ENST00000466045 EXOC4Q96A65 974 aa11.21□□□□□ -0.61
CDHR3-203ENST00000466045 RWDD1Q9H446 243 aaPredicted RBP11.21□□□□□ -0.61
CDHR3-203ENST00000466045 CEP170BQ9Y4F5 1589 aaPredicted RBP11.21□□□□□ -0.61
CDHR3-203ENST00000466045 ERBB3P21860 1342 aa11.21□□□□□ -0.61
CDHR3-203ENST00000466045 IPO8O15397 1037 aaKnown RBP11.21□□□□□ -0.62
CDHR3-203ENST00000466045 KDM4AO75164 1064 aa11.21□□□□□ -0.62
CDHR3-203ENST00000466045 ZRANB2O95218 330 aaKnown RBP eCLIP11.21□□□□□ -0.62
CDHR3-203ENST00000466045 WDR43Q15061 677 aaKnown RBP eCLIP11.21□□□□□ -0.62
CDHR3-203ENST00000466045 ERCC4Q92889 916 aaPredicted RBP11.21□□□□□ -0.62
CDHR3-203ENST00000466045 ANKRD18BA2A2Z9 1011 aa11.2□□□□□ -0.62
CDHR3-203ENST00000466045 EIF3CLB5ME19 914 aaKnown RBP11.2□□□□□ -0.62
CDHR3-203ENST00000466045 KIF2AO00139 706 aaPredicted RBP11.2□□□□□ -0.62
CDHR3-203ENST00000466045 SMC2O95347 1197 aa11.2□□□□□ -0.62
CDHR3-203ENST00000466045 ACTN2P35609 894 aa11.2□□□□□ -0.62
CDHR3-203ENST00000466045 ZNF428Q96B54 188 aa11.2□□□□□ -0.62
CDHR3-203ENST00000466045 MIEF2Q96C03 454 aa11.2□□□□□ -0.62
CDHR3-203ENST00000466045 AK7Q96M32 723 aa11.2□□□□□ -0.62
CDHR3-203ENST00000466045 EIF3CQ99613 913 aaKnown RBP11.2□□□□□ -0.62
CDHR3-203ENST00000466045 ADAMTS8Q9UP79 889 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms