RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 ZNF408Q9H9D4 720 aa11.27□□□□□ -0.6
SCAF11-205ENST00000465950 ZBTB24O43167 697 aaPredicted RBP11.27□□□□□ -0.61
SCAF11-205ENST00000465950 CDKL5O76039 1030 aa11.27□□□□□ -0.61
SCAF11-205ENST00000465950 DPP8Q6V1X1 898 aaPredicted RBP11.27□□□□□ -0.61
SCAF11-205ENST00000465950 KDM5CP41229 1560 aa11.27□□□□□ -0.61
SCAF11-205ENST00000465950 SLC4A2P04920 1241 aa11.27□□□□□ -0.61
SCAF11-205ENST00000465950 ABCF2Q9UG63 623 aa11.27□□□□□ -0.61
SCAF11-205ENST00000465950 ERVV-2B6SEH9 535 aa11.27□□□□□ -0.61
SCAF11-205ENST00000465950 WASF1Q92558 559 aa11.27□□□□□ -0.61
SCAF11-205ENST00000465950 RSPH6AQ9H0K4 717 aa11.27□□□□□ -0.61
SCAF11-205ENST00000465950 BMP2KQ9NSY1 1161 aaPredicted RBP11.27□□□□□ -0.61
SCAF11-205ENST00000465950 ABT1Q9ULW3 272 aaKnown RBP11.27□□□□□ -0.61
SCAF11-205ENST00000465950 ADGRF5Q8IZF2 1346 aa11.26□□□□□ -0.61
SCAF11-205ENST00000465950 BLMP54132 1417 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-205ENST00000465950 ODF2Q5BJF6 829 aa11.26□□□□□ -0.61
SCAF11-205ENST00000465950 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
SCAF11-205ENST00000465950 CCDC12Q8WUD4 166 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-205ENST00000465950 CRNKL1Q9BZJ0 848 aaKnown RBP11.26□□□□□ -0.61
SCAF11-205ENST00000465950 GPHNQ9NQX3 736 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-205ENST00000465950 FERMT2Q96AC1 680 aa11.26□□□□□ -0.61
SCAF11-205ENST00000465950 GPBP1L1Q9HC44 474 aaPredicted RBP11.26□□□□□ -0.61
SCAF11-205ENST00000465950 NOD1Q9Y239 953 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 NOP2P46087 812 aaKnown RBP11.25□□□□□ -0.61
SCAF11-205ENST00000465950 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.25□□□□□ -0.61
SCAF11-205ENST00000465950 IFT57Q9NWB7 429 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 PDE4BQ07343 736 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 VEZTQ9HBM0 779 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 ANO2Q9NQ90 1003 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 NOL7Q9UMY1 257 aaKnown RBP11.25□□□□□ -0.61
SCAF11-205ENST00000465950 PLEKHH1Q9ULM0 1364 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 KRT18P05783 430 aaKnown RBP11.25□□□□□ -0.61
SCAF11-205ENST00000465950 ECE1P42892 770 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 SUPT20HL1Q3ZLR7 823 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 C2CD5Q86YS7 1000 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 C2orf69Q8N8R5 385 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 BABAM1Q9NWV8 329 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 GGA1Q9UJY5 639 aa11.25□□□□□ -0.61
SCAF11-205ENST00000465950 CHD1O14646 1710 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 ANKRD45Q5TZF3 282 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 TBC1D22AQ8WUA7 517 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 RIMBP3CA6NJZ7 1639 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 RIMBP3BA6NNM3 1639 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 RIMBP3Q9UFD9 1639 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 AXDND1Q5T1B0 1012 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-205ENST00000465950 CABLES1Q8TDN4 633 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 CARD10Q9BWT7 1032 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 MYD88Q99836 296 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 RNF216Q9NWF9 866 aaPredicted RBP11.24□□□□□ -0.61
SCAF11-205ENST00000465950 ADRA2BP18089 450 aa11.24□□□□□ -0.61
SCAF11-205ENST00000465950 TPM3P06753 285 aa11.23□□□□□ -0.61
SCAF11-205ENST00000465950 CLUAP1Q96AJ1 413 aa11.23□□□□□ -0.61
SCAF11-205ENST00000465950 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
SCAF11-205ENST00000465950 TRIM37O94972 964 aa11.23□□□□□ -0.61
SCAF11-205ENST00000465950 PIP4K2AP48426 406 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-205ENST00000465950 CCDC93Q567U6 631 aa11.23□□□□□ -0.61
SCAF11-205ENST00000465950 SLKQ9H2G2 1235 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-205ENST00000465950 CCDC196A0A1B0GTZ2 297 aa11.23□□□□□ -0.61
SCAF11-205ENST00000465950 RAB11FIP3O75154 756 aa11.23□□□□□ -0.61
SCAF11-205ENST00000465950 POLR3AO14802 1390 aaPredicted RBP11.23□□□□□ -0.61
SCAF11-205ENST00000465950 HSPA1LP34931 641 aa11.23□□□□□ -0.61
SCAF11-205ENST00000465950 CCNA1P78396 465 aa11.23□□□□□ -0.61
SCAF11-205ENST00000465950 IQCA1Q86XH1 822 aa11.22□□□□□ -0.61
SCAF11-205ENST00000465950 NFATC2IPQ8NCF5 419 aa11.22□□□□□ -0.61
SCAF11-205ENST00000465950 SUPT16HQ9Y5B9 1047 aaKnown RBP11.22□□□□□ -0.61
SCAF11-205ENST00000465950 CCDC96Q2M329 555 aa11.22□□□□□ -0.61
SCAF11-205ENST00000465950 LDHAL6AQ6ZMR3 332 aa11.22□□□□□ -0.61
SCAF11-205ENST00000465950 GJD4Q96KN9 370 aaPredicted RBP11.22□□□□□ -0.61
SCAF11-205ENST00000465950 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
SCAF11-205ENST00000465950 NOC3LQ8WTT2 800 aaKnown RBP11.22□□□□□ -0.61
SCAF11-205ENST00000465950 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.22□□□□□ -0.61
SCAF11-205ENST00000465950 PPIP5K2O43314 1243 aa11.22□□□□□ -0.61
SCAF11-205ENST00000465950 INTS3Q68E01 1043 aaKnown RBP11.22□□□□□ -0.61
SCAF11-205ENST00000465950 GBP4Q96PP9 640 aa11.22□□□□□ -0.61
SCAF11-205ENST00000465950 MTIF3Q9H2K0 278 aaKnown RBP11.22□□□□□ -0.61
SCAF11-205ENST00000465950 TTC6Q86TZ1 520 aa11.21□□□□□ -0.61
SCAF11-205ENST00000465950 MPNDQ8N594 471 aa11.21□□□□□ -0.61
SCAF11-205ENST00000465950 NSFL1CQ9UNZ2 370 aaKnown RBP11.21□□□□□ -0.61
SCAF11-205ENST00000465950 HECW2Q9P2P5 1572 aa11.21□□□□□ -0.61
SCAF11-205ENST00000465950 ARAP3Q8WWN8 1544 aa11.21□□□□□ -0.61
SCAF11-205ENST00000465950 DISP1Q96F81 1524 aa11.21□□□□□ -0.61
SCAF11-205ENST00000465950 PPP2R1AP30153 589 aa11.21□□□□□ -0.61
SCAF11-205ENST00000465950 RAB34Q9BZG1 259 aa11.21□□□□□ -0.61
SCAF11-205ENST00000465950 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.61
SCAF11-205ENST00000465950 IPO7O95373 1038 aaKnown RBP11.21□□□□□ -0.62
SCAF11-205ENST00000465950 GPTP24298 496 aa11.21□□□□□ -0.62
SCAF11-205ENST00000465950 EPS15P42566 896 aa11.21□□□□□ -0.62
SCAF11-205ENST00000465950 KRT32Q14532 448 aa11.21□□□□□ -0.62
SCAF11-205ENST00000465950 CT47A1Q5JQC4 288 aaPredicted RBP11.21□□□□□ -0.62
SCAF11-205ENST00000465950 RRP12Q5JTH9 1297 aaKnown RBP11.21□□□□□ -0.62
SCAF11-205ENST00000465950 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.21□□□□□ -0.622e-7■■■■□ 20.4
SCAF11-205ENST00000465950 MIER1Q8N108 512 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 NBPF3Q9H094 633 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 PDIA4P13667 645 aaKnown RBP11.2□□□□□ -0.62
SCAF11-205ENST00000465950 DLGAP5Q15398 846 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 ANKRD13DQ6ZTN6 518 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 IDH1O75874 414 aaKnown RBP11.2□□□□□ -0.62
SCAF11-205ENST00000465950 NBPF1Q3BBV0 1214 aa11.2□□□□□ -0.62
SCAF11-205ENST00000465950 B4GALNT3Q6L9W6 998 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms