RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 BTBD11A6QL63 1104 aa18.74■□□□□ 0.59
CACNA1C-224ENST00000465934 ZPR1O75312 459 aa18.73■□□□□ 0.59
CACNA1C-224ENST00000465934 STARD3NLO95772 234 aa18.73■□□□□ 0.59
CACNA1C-224ENST00000465934 DDX10Q13206 875 aaKnown RBP18.73■□□□□ 0.59
CACNA1C-224ENST00000465934 SIPA1L3O60292 1781 aaPredicted RBP18.73■□□□□ 0.59
CACNA1C-224ENST00000465934 CHD4Q14839 1912 aa18.72■□□□□ 0.59
CACNA1C-224ENST00000465934 POLRMTO00411 1230 aaKnown RBP18.72■□□□□ 0.59
CACNA1C-224ENST00000465934 DPEP1P16444 411 aa18.72■□□□□ 0.59
CACNA1C-224ENST00000465934 TGFB2P61812 414 aa18.72■□□□□ 0.59
CACNA1C-224ENST00000465934 RTF1Q92541 710 aaKnown RBP18.72■□□□□ 0.59
CACNA1C-224ENST00000465934 FMNL2Q96PY5 1086 aa18.72■□□□□ 0.59
CACNA1C-224ENST00000465934 BCL2L12Q9HB09 334 aa18.72■□□□□ 0.59
CACNA1C-224ENST00000465934 NARFQ9UHQ1 456 aa18.72■□□□□ 0.59
CACNA1C-224ENST00000465934 KIAA1551Q9HCM1 1747 aa18.71■□□□□ 0.59
CACNA1C-224ENST00000465934 TM4SF1P30408 202 aa18.71■□□□□ 0.59
CACNA1C-224ENST00000465934 PRAMEF22A3QJZ6 481 aa18.7■□□□□ 0.58
CACNA1C-224ENST00000465934 EIF5P55010 431 aaKnown RBP18.7■□□□□ 0.58
CACNA1C-224ENST00000465934 NFIXQ14938 502 aa18.7■□□□□ 0.58
CACNA1C-224ENST00000465934 PLEKHF1Q96S99 279 aa18.7■□□□□ 0.58
CACNA1C-224ENST00000465934 KIF13BQ9NQT8 1826 aa18.7■□□□□ 0.58
CACNA1C-224ENST00000465934 A1BGP04217 495 aa18.69■□□□□ 0.58
CACNA1C-224ENST00000465934 KCNA3P22001 575 aa18.69■□□□□ 0.58
CACNA1C-224ENST00000465934 BCS1LQ9Y276 419 aa18.69■□□□□ 0.58
CACNA1C-224ENST00000465934 ZNF330Q9Y3S2 320 aaPredicted RBP18.69■□□□□ 0.58
CACNA1C-224ENST00000465934 TEX13AQ9BXU3 409 aaPredicted RBP18.68■□□□□ 0.58
CACNA1C-224ENST00000465934 HTATSF1O43719 755 aaKnown RBP18.67■□□□□ 0.58
CACNA1C-224ENST00000465934 PIP4K2AP48426 406 aaPredicted RBP18.67■□□□□ 0.58
CACNA1C-224ENST00000465934 MIS18AQ9NYP9 233 aa18.67■□□□□ 0.58
CACNA1C-224ENST00000465934 USP16Q9Y5T5 823 aa18.67■□□□□ 0.58
CACNA1C-224ENST00000465934 N4BP2Q86UW6 1770 aaPredicted RBP18.67■□□□□ 0.58
CACNA1C-224ENST00000465934 CHRNA5P30532 468 aa18.66■□□□□ 0.58
CACNA1C-224ENST00000465934 RALBP1Q15311 655 aa18.66■□□□□ 0.58
CACNA1C-224ENST00000465934 THUMPD2Q9BTF0 503 aaKnown RBP18.66■□□□□ 0.58
CACNA1C-224ENST00000465934 TBC1D2BQ9UPU7 963 aa18.66■□□□□ 0.58
CACNA1C-224ENST00000465934 ATP10DQ9P241 1426 aa18.66■□□□□ 0.58
CACNA1C-224ENST00000465934 IL6STP40189 918 aaPredicted RBP18.65■□□□□ 0.58
CACNA1C-224ENST00000465934 BICDL1Q6ZP65 573 aa18.65■□□□□ 0.58
CACNA1C-224ENST00000465934 ADCY9O60503 1353 aa18.65■□□□□ 0.58
CACNA1C-224ENST00000465934 NEFMP07197 916 aa18.64■□□□□ 0.57
CACNA1C-224ENST00000465934 TAF7Q15545 349 aaPredicted RBP18.64■□□□□ 0.57
CACNA1C-224ENST00000465934 NFE2L2Q16236 605 aa18.64■□□□□ 0.57
CACNA1C-224ENST00000465934 TBC1D9BQ66K14 1250 aa18.64■□□□□ 0.57
CACNA1C-224ENST00000465934 A0A087WZG4 1122 aa18.63■□□□□ 0.57
CACNA1C-224ENST00000465934 SERPINB2P05120 415 aa18.63■□□□□ 0.57
CACNA1C-224ENST00000465934 SNRPA1P09661 255 aaKnown RBP18.63■□□□□ 0.57
CACNA1C-224ENST00000465934 CARMIL3Q8ND23 1372 aa18.63■□□□□ 0.57
CACNA1C-224ENST00000465934 ZNF526Q8TF50 670 aaPredicted RBP18.62■□□□□ 0.57
CACNA1C-224ENST00000465934 PIM2Q9P1W9 311 aa18.62■□□□□ 0.57
CACNA1C-224ENST00000465934 MYBBP1AQ9BQG0 1328 aaKnown RBP18.61■□□□□ 0.57
CACNA1C-224ENST00000465934 MAPK8IP3Q9UPT6 1336 aa18.61■□□□□ 0.57
CACNA1C-224ENST00000465934 CAMTA2O94983 1202 aa18.61■□□□□ 0.57
CACNA1C-224ENST00000465934 ARHGAP27Q6ZUM4 889 aa18.61■□□□□ 0.57
CACNA1C-224ENST00000465934 GIGYF1O75420 1035 aaPredicted RBP18.6■□□□□ 0.57
CACNA1C-224ENST00000465934 DALRD3Q5D0E6 543 aaKnown RBP18.6■□□□□ 0.57
CACNA1C-224ENST00000465934 NBPF26B4DH59 902 aa18.59■□□□□ 0.57
CACNA1C-224ENST00000465934 C1QTNF8P60827 252 aa18.59■□□□□ 0.57
CACNA1C-224ENST00000465934 NBPF10Q6P3W6 841 aaKnown RBP18.59■□□□□ 0.57
CACNA1C-224ENST00000465934 DZIP3Q86Y13 1208 aaKnown RBP18.59■□□□□ 0.57
CACNA1C-224ENST00000465934 CCDC24Q8N4L8 307 aa18.59■□□□□ 0.57
CACNA1C-224ENST00000465934 NBPF15Q8N660 670 aa18.59■□□□□ 0.57
CACNA1C-224ENST00000465934 SCN7AQ01118 1682 aa18.59■□□□□ 0.57
CACNA1C-224ENST00000465934 NRXN2Q9P2S2 1712 aa18.58■□□□□ 0.57
CACNA1C-224ENST00000465934 BRCA1P38398 1863 aaKnown RBP18.57■□□□□ 0.56
CACNA1C-224ENST00000465934 NPM2Q86SE8 214 aaKnown RBP18.57■□□□□ 0.56
CACNA1C-224ENST00000465934 PNNQ9H307 717 aaKnown RBP18.57■□□□□ 0.56
CACNA1C-224ENST00000465934 AFDNP55196 1824 aaKnown RBP18.56■□□□□ 0.56
CACNA1C-224ENST00000465934 PRR5LQ6MZQ0 368 aa18.56■□□□□ 0.56
CACNA1C-224ENST00000465934 CCDC146Q8IYE0 955 aa18.56■□□□□ 0.56
CACNA1C-224ENST00000465934 GPBP1L1Q9HC44 474 aaPredicted RBP18.56■□□□□ 0.56
CACNA1C-224ENST00000465934 RRP7AQ9Y3A4 280 aaKnown RBP18.56■□□□□ 0.56
CACNA1C-224ENST00000465934 RIPK4P57078 832 aa18.55■□□□□ 0.56
CACNA1C-224ENST00000465934 EIF4A1P60842 406 aaKnown RBP18.55■□□□□ 0.56
CACNA1C-224ENST00000465934 C2CD5Q86YS7 1000 aa18.55■□□□□ 0.56
CACNA1C-224ENST00000465934 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
CACNA1C-224ENST00000465934 DLG5Q8TDM6 1919 aa18.55■□□□□ 0.56
CACNA1C-224ENST00000465934 TMPOP42166 694 aaKnown RBP18.54■□□□□ 0.56
CACNA1C-224ENST00000465934 SETDB2Q96T68 719 aa18.54■□□□□ 0.56
CACNA1C-224ENST00000465934 PRKRIP1Q9H875 184 aaPredicted RBP18.53■□□□□ 0.56
CACNA1C-224ENST00000465934 C9orf131Q5VYM1 1079 aa18.52■□□□□ 0.56
CACNA1C-224ENST00000465934 CNBD1Q8NA66 436 aa18.52■□□□□ 0.56
CACNA1C-224ENST00000465934 KDM3BQ7LBC6 1761 aa18.52■□□□□ 0.55
CACNA1C-224ENST00000465934 BCORQ6W2J9 1755 aa18.51■□□□□ 0.55
CACNA1C-224ENST00000465934 H0YIN7 160 aa18.51■□□□□ 0.55
CACNA1C-224ENST00000465934 NEUROD2Q15784 382 aa18.51■□□□□ 0.55
CACNA1C-224ENST00000465934 NGEFQ8N5V2 710 aa18.51■□□□□ 0.55
CACNA1C-224ENST00000465934 BRIP1Q9BX63 1249 aa18.51■□□□□ 0.55
CACNA1C-224ENST00000465934 TSPYL4Q9UJ04 414 aa18.51■□□□□ 0.55
CACNA1C-224ENST00000465934 SENP3-EIF4A1A0A087X0R7 540 aa18.5■□□□□ 0.55
CACNA1C-224ENST00000465934 RASSF7Q02833 373 aa18.5■□□□□ 0.55
CACNA1C-224ENST00000465934 WDR43Q15061 677 aaKnown RBP eCLIP18.5■□□□□ 0.55
CACNA1C-224ENST00000465934 HLFQ16534 295 aa18.5■□□□□ 0.55
CACNA1C-224ENST00000465934 CLEC4GQ6UXB4 293 aa18.5■□□□□ 0.55
CACNA1C-224ENST00000465934 TTLL6Q8N841 843 aa18.5■□□□□ 0.55
CACNA1C-224ENST00000465934 ADAMTS8Q9UP79 889 aa18.5■□□□□ 0.55
CACNA1C-224ENST00000465934 ARFGEF1Q9Y6D6 1849 aa18.49■□□□□ 0.55
CACNA1C-224ENST00000465934 NPHP1O15259 732 aa18.49■□□□□ 0.55
CACNA1C-224ENST00000465934 ZNF622Q969S3 477 aaKnown RBP eCLIP18.49■□□□□ 0.55
CACNA1C-224ENST00000465934 ZNF652Q9Y2D9 606 aa18.49■□□□□ 0.55
CACNA1C-224ENST00000465934 MYL6BP14649 208 aa18.48■□□□□ 0.55
CACNA1C-224ENST00000465934 PDE6BP35913 854 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms