RNA–Protein interactions for RNA: ENST00000465529.1

TOM1-213, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-213ENST00000465529 HEG1Q9ULI3 1381 aa22.89■■□□□ 1.26
TOM1-213ENST00000465529 USPL1Q5W0Q7 1092 aa22.89■■□□□ 1.25
TOM1-213ENST00000465529 CANXP27824 592 aaKnown RBP22.88■■□□□ 1.25
TOM1-213ENST00000465529 DDR1Q08345 913 aa22.88■■□□□ 1.25
TOM1-213ENST00000465529 BTBD11A6QL63 1104 aa22.87■■□□□ 1.25
TOM1-213ENST00000465529 PARP3Q9Y6F1 533 aa22.87■■□□□ 1.25
TOM1-213ENST00000465529 GRIN3BO60391 1043 aa22.85■■□□□ 1.25
TOM1-213ENST00000465529 RTF1Q92541 710 aaKnown RBP22.85■■□□□ 1.25
TOM1-213ENST00000465529 AFDNP55196 1824 aaKnown RBP22.85■■□□□ 1.25
TOM1-213ENST00000465529 BRCA1P38398 1863 aaKnown RBP22.84■■□□□ 1.25
TOM1-213ENST00000465529 A0A0G2JLW4 131 aa22.84■■□□□ 1.25
TOM1-213ENST00000465529 PRAMEF22A3QJZ6 481 aa22.84■■□□□ 1.25
TOM1-213ENST00000465529 ZPR1O75312 459 aa22.84■■□□□ 1.25
TOM1-213ENST00000465529 PLEKHF1Q96S99 279 aa22.84■■□□□ 1.25
TOM1-213ENST00000465529 BCL2L12Q9HB09 334 aa22.84■■□□□ 1.25
TOM1-213ENST00000465529 FMNL2Q96PY5 1086 aa22.83■■□□□ 1.25
TOM1-213ENST00000465529 POLRMTO00411 1230 aaKnown RBP22.82■■□□□ 1.24
TOM1-213ENST00000465529 STARD3NLO95772 234 aa22.82■■□□□ 1.24
TOM1-213ENST00000465529 TM4SF1P30408 202 aa22.82■■□□□ 1.24
TOM1-213ENST00000465529 NARFQ9UHQ1 456 aa22.82■■□□□ 1.24
TOM1-213ENST00000465529 A1BGP04217 495 aa22.81■■□□□ 1.24
TOM1-213ENST00000465529 DPEP1P16444 411 aa22.81■■□□□ 1.24
TOM1-213ENST00000465529 PIP4K2AP48426 406 aaPredicted RBP22.81■■□□□ 1.24
TOM1-213ENST00000465529 RALBP1Q15311 655 aa22.81■■□□□ 1.24
TOM1-213ENST00000465529 ZNF330Q9Y3S2 320 aaPredicted RBP22.81■■□□□ 1.24
TOM1-213ENST00000465529 SCN7AQ01118 1682 aa22.81■■□□□ 1.24
TOM1-213ENST00000465529 EIF5P55010 431 aaKnown RBP22.8■■□□□ 1.24
TOM1-213ENST00000465529 MIS18AQ9NYP9 233 aa22.8■■□□□ 1.24
TOM1-213ENST00000465529 TGFB2P61812 414 aa22.79■■□□□ 1.24
TOM1-213ENST00000465529 NFIXQ14938 502 aa22.79■■□□□ 1.24
TOM1-213ENST00000465529 THUMPD2Q9BTF0 503 aaKnown RBP22.79■■□□□ 1.24
TOM1-213ENST00000465529 USP16Q9Y5T5 823 aa22.79■■□□□ 1.24
TOM1-213ENST00000465529 HTATSF1O43719 755 aaKnown RBP22.78■■□□□ 1.24
TOM1-213ENST00000465529 NRXN2Q9P2S2 1712 aa22.78■■□□□ 1.24
TOM1-213ENST00000465529 KDM3BQ7LBC6 1761 aa22.78■■□□□ 1.24
TOM1-213ENST00000465529 KCNA3P22001 575 aa22.77■■□□□ 1.24
TOM1-213ENST00000465529 TEX13AQ9BXU3 409 aaPredicted RBP22.77■■□□□ 1.24
TOM1-213ENST00000465529 TBC1D2BQ9UPU7 963 aa22.77■■□□□ 1.24
TOM1-213ENST00000465529 BCS1LQ9Y276 419 aa22.77■■□□□ 1.24
TOM1-213ENST00000465529 NEFMP07197 916 aa22.76■■□□□ 1.23
TOM1-213ENST00000465529 NFE2L2Q16236 605 aa22.76■■□□□ 1.23
TOM1-213ENST00000465529 BICDL1Q6ZP65 573 aa22.76■■□□□ 1.23
TOM1-213ENST00000465529 MYBBP1AQ9BQG0 1328 aaKnown RBP22.76■■□□□ 1.23
TOM1-213ENST00000465529 BCORQ6W2J9 1755 aa22.76■■□□□ 1.23
TOM1-213ENST00000465529 CHRNA5P30532 468 aa22.75■■□□□ 1.23
TOM1-213ENST00000465529 IL6STP40189 918 aaPredicted RBP22.74■■□□□ 1.23
TOM1-213ENST00000465529 TAF7Q15545 349 aaPredicted RBP22.74■■□□□ 1.23
TOM1-213ENST00000465529 MAPK8IP3Q9UPT6 1336 aa22.74■■□□□ 1.23
TOM1-213ENST00000465529 CARMIL3Q8ND23 1372 aa22.74■■□□□ 1.23
TOM1-213ENST00000465529 LAMB4A4D0S4 1761 aa22.73■■□□□ 1.23
TOM1-213ENST00000465529 TBC1D9BQ66K14 1250 aa22.73■■□□□ 1.23
TOM1-213ENST00000465529 ARFGEF1Q9Y6D6 1849 aa22.73■■□□□ 1.23
TOM1-213ENST00000465529 ATP10DQ9P241 1426 aa22.73■■□□□ 1.23
TOM1-213ENST00000465529 A0A087WZG4 1122 aa22.72■■□□□ 1.23
TOM1-213ENST00000465529 SERPINB2P05120 415 aa22.72■■□□□ 1.23
TOM1-213ENST00000465529 SNRPA1P09661 255 aaKnown RBP22.72■■□□□ 1.23
TOM1-213ENST00000465529 ADCY9O60503 1353 aa22.71■■□□□ 1.23
TOM1-213ENST00000465529 ANKRD31Q8N7Z5 1873 aa22.71■■□□□ 1.23
TOM1-213ENST00000465529 CAMTA2O94983 1202 aa22.7■■□□□ 1.22
TOM1-213ENST00000465529 CCDC146Q8IYE0 955 aa22.7■■□□□ 1.22
TOM1-213ENST00000465529 DLEC1Q9Y238 1755 aa22.69■■□□□ 1.22
TOM1-213ENST00000465529 NBPF26B4DH59 902 aa22.69■■□□□ 1.22
TOM1-213ENST00000465529 NBPF10Q6P3W6 841 aaKnown RBP22.69■■□□□ 1.22
TOM1-213ENST00000465529 CCDC24Q8N4L8 307 aa22.69■■□□□ 1.22
TOM1-213ENST00000465529 NBPF15Q8N660 670 aa22.69■■□□□ 1.22
TOM1-213ENST00000465529 DZIP3Q86Y13 1208 aaKnown RBP22.68■■□□□ 1.22
TOM1-213ENST00000465529 PNNQ9H307 717 aaKnown RBP22.68■■□□□ 1.22
TOM1-213ENST00000465529 PIM2Q9P1W9 311 aa22.68■■□□□ 1.22
TOM1-213ENST00000465529 RRP7AQ9Y3A4 280 aaKnown RBP22.68■■□□□ 1.22
TOM1-213ENST00000465529 RIPK4P57078 832 aa22.67■■□□□ 1.22
TOM1-213ENST00000465529 ARHGAP27Q6ZUM4 889 aa22.67■■□□□ 1.22
TOM1-213ENST00000465529 ZNF526Q8TF50 670 aaPredicted RBP22.67■■□□□ 1.22
TOM1-213ENST00000465529 PRKRIP1Q9H875 184 aaPredicted RBP22.67■■□□□ 1.22
TOM1-213ENST00000465529 COL11A2P13942 1736 aaPredicted RBP22.65■■□□□ 1.22
TOM1-213ENST00000465529 TMPOP42166 694 aaKnown RBP22.65■■□□□ 1.22
TOM1-213ENST00000465529 EIF4A1P60842 406 aaKnown RBP22.65■■□□□ 1.22
TOM1-213ENST00000465529 NPM2Q86SE8 214 aaKnown RBP22.65■■□□□ 1.22
TOM1-213ENST00000465529 DALRD3Q5D0E6 543 aaKnown RBP22.64■■□□□ 1.21
TOM1-213ENST00000465529 PNISRQ8TF01 805 aaKnown RBP22.64■■□□□ 1.21
TOM1-213ENST00000465529 GIGYF1O75420 1035 aaPredicted RBP22.63■■□□□ 1.21
TOM1-213ENST00000465529 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
TOM1-213ENST00000465529 PRR5LQ6MZQ0 368 aa22.63■■□□□ 1.21
TOM1-213ENST00000465529 ADAMTS8Q9UP79 889 aa22.62■■□□□ 1.21
TOM1-213ENST00000465529 WDR43Q15061 677 aaKnown RBP eCLIP22.61■■□□□ 1.21
TOM1-213ENST00000465529 C2CD5Q86YS7 1000 aa22.61■■□□□ 1.21
TOM1-213ENST00000465529 NGEFQ8N5V2 710 aa22.61■■□□□ 1.21
TOM1-213ENST00000465529 CACNA1SQ13698 1873 aa22.6■■□□□ 1.21
TOM1-213ENST00000465529 C1QTNF8P60827 252 aa22.6■■□□□ 1.21
TOM1-213ENST00000465529 TSPYL4Q9UJ04 414 aa22.6■■□□□ 1.21
TOM1-213ENST00000465529 SBF1O95248 1867 aa22.6■■□□□ 1.21
TOM1-213ENST00000465529 SETDB2Q96T68 719 aa22.59■■□□□ 1.21
TOM1-213ENST00000465529 HLFQ16534 295 aa22.58■■□□□ 1.21
TOM1-213ENST00000465529 RUNDC1Q96C34 613 aa22.58■■□□□ 1.21
TOM1-213ENST00000465529 GPBP1L1Q9HC44 474 aaPredicted RBP22.58■■□□□ 1.21
TOM1-213ENST00000465529 NUP98P52948 1817 aa22.57■■□□□ 1.2
TOM1-213ENST00000465529 MYL6BP14649 208 aa22.57■■□□□ 1.2
TOM1-213ENST00000465529 CNBD1Q8NA66 436 aa22.57■■□□□ 1.2
TOM1-213ENST00000465529 TRIM35Q9UPQ4 493 aa22.57■■□□□ 1.2
TOM1-213ENST00000465529 RASSF7Q02833 373 aa22.56■■□□□ 1.2
TOM1-213ENST00000465529 C9orf131Q5VYM1 1079 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms