RNA–Protein interactions for RNA: ENST00000465405.1

GABRE-205, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-205ENST00000465405 ZNF790Q6PG37 636 aa11.74□□□□□ -0.53
GABRE-205ENST00000465405 TTC5Q8N0Z6 440 aa11.74□□□□□ -0.53
GABRE-205ENST00000465405 ZNF496Q96IT1 587 aaPredicted RBP11.74□□□□□ -0.53
GABRE-205ENST00000465405 WWC3Q9ULE0 1092 aa11.74□□□□□ -0.53
GABRE-205ENST00000465405 CHD4Q14839 1912 aa11.74□□□□□ -0.53
GABRE-205ENST00000465405 KCNQ3O43525 872 aa11.73□□□□□ -0.53
GABRE-205ENST00000465405 SOS1Q07889 1333 aaPredicted RBP11.73□□□□□ -0.53
GABRE-205ENST00000465405 DCTN1Q14203 1278 aa11.73□□□□□ -0.53
GABRE-205ENST00000465405 FKBP8Q14318 412 aa11.73□□□□□ -0.53
GABRE-205ENST00000465405 MCM10Q7L590 875 aa11.73□□□□□ -0.53
GABRE-205ENST00000465405 VSIG10Q8N0Z9 540 aa11.73□□□□□ -0.53
GABRE-205ENST00000465405 USP42Q9H9J4 1324 aaKnown RBP11.73□□□□□ -0.53
GABRE-205ENST00000465405 ZBTB1Q9Y2K1 713 aa11.73□□□□□ -0.53
GABRE-205ENST00000465405 KIAA1551Q9HCM1 1747 aa11.72□□□□□ -0.53
GABRE-205ENST00000465405 HEG1Q9ULI3 1381 aa11.72□□□□□ -0.53
GABRE-205ENST00000465405 KIF13BQ9NQT8 1826 aa11.72□□□□□ -0.53
GABRE-205ENST00000465405 BTBD11A6QL63 1104 aa11.71□□□□□ -0.53
GABRE-205ENST00000465405 CANXP27824 592 aaKnown RBP11.71□□□□□ -0.53
GABRE-205ENST00000465405 USPL1Q5W0Q7 1092 aa11.71□□□□□ -0.53
GABRE-205ENST00000465405 RTF1Q92541 710 aaKnown RBP11.71□□□□□ -0.53
GABRE-205ENST00000465405 PLEKHF1Q96S99 279 aa11.71□□□□□ -0.53
GABRE-205ENST00000465405 N4BP2Q86UW6 1770 aaPredicted RBP11.71□□□□□ -0.54
GABRE-205ENST00000465405 PXDNLA1KZ92 1463 aa11.7□□□□□ -0.54
GABRE-205ENST00000465405 DLG5Q8TDM6 1919 aa11.7□□□□□ -0.54
GABRE-205ENST00000465405 C10orf71Q711Q0 1435 aa11.7□□□□□ -0.54
GABRE-205ENST00000465405 COL15A1P39059 1388 aa11.7□□□□□ -0.54
GABRE-205ENST00000465405 GRIN3BO60391 1043 aa11.7□□□□□ -0.54
GABRE-205ENST00000465405 DDR1Q08345 913 aa11.7□□□□□ -0.54
GABRE-205ENST00000465405 RALBP1Q15311 655 aa11.7□□□□□ -0.54
GABRE-205ENST00000465405 ZNF784Q8NCA9 323 aaPredicted RBP11.7□□□□□ -0.54
GABRE-205ENST00000465405 PARP3Q9Y6F1 533 aa11.7□□□□□ -0.54
GABRE-205ENST00000465405 A0A0G2JLW4 131 aa11.69□□□□□ -0.54
GABRE-205ENST00000465405 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
GABRE-205ENST00000465405 ZPR1O75312 459 aa11.69□□□□□ -0.54
GABRE-205ENST00000465405 STARD3NLO95772 234 aa11.69□□□□□ -0.54
GABRE-205ENST00000465405 TM4SF1P30408 202 aa11.69□□□□□ -0.54
GABRE-205ENST00000465405 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
GABRE-205ENST00000465405 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
GABRE-205ENST00000465405 NARFQ9UHQ1 456 aa11.69□□□□□ -0.54
GABRE-205ENST00000465405 GOLGB1Q14789 3259 aaKnown RBP11.69□□□□□ -0.54
GABRE-205ENST00000465405 HTATSF1O43719 755 aaKnown RBP11.68□□□□□ -0.54
GABRE-205ENST00000465405 A1BGP04217 495 aa11.68□□□□□ -0.54
GABRE-205ENST00000465405 KCNA4P22459 653 aa11.68□□□□□ -0.54
GABRE-205ENST00000465405 EIF5P55010 431 aaKnown RBP11.68□□□□□ -0.54
GABRE-205ENST00000465405 PIP4P2Q8N4L2 257 aa11.68□□□□□ -0.54
GABRE-205ENST00000465405 TEX13AQ9BXU3 409 aaPredicted RBP11.68□□□□□ -0.54
GABRE-205ENST00000465405 POLRMTO00411 1230 aaKnown RBP11.67□□□□□ -0.54
GABRE-205ENST00000465405 NEFMP07197 916 aa11.67□□□□□ -0.54
GABRE-205ENST00000465405 DPEP1P16444 411 aa11.67□□□□□ -0.54
GABRE-205ENST00000465405 TGFB2P61812 414 aa11.67□□□□□ -0.54
GABRE-205ENST00000465405 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
GABRE-205ENST00000465405 PLSCR2Q9NRY7 297 aa11.67□□□□□ -0.54
GABRE-205ENST00000465405 MIS18AQ9NYP9 233 aa11.67□□□□□ -0.54
GABRE-205ENST00000465405 ZNF330Q9Y3S2 320 aaPredicted RBP11.67□□□□□ -0.54
GABRE-205ENST00000465405 USP16Q9Y5T5 823 aa11.67□□□□□ -0.54
GABRE-205ENST00000465405 MYBBP1AQ9BQG0 1328 aaKnown RBP11.66□□□□□ -0.54
GABRE-205ENST00000465405 PIP4K2AP48426 406 aaPredicted RBP11.66□□□□□ -0.54
GABRE-205ENST00000465405 NFIXQ14938 502 aa11.66□□□□□ -0.54
GABRE-205ENST00000465405 TAF7Q15545 349 aaPredicted RBP11.66□□□□□ -0.54
GABRE-205ENST00000465405 NFE2L2Q16236 605 aa11.66□□□□□ -0.54
GABRE-205ENST00000465405 TBC1D2BQ9UPU7 963 aa11.66□□□□□ -0.54
GABRE-205ENST00000465405 AFDNP55196 1824 aaKnown RBP11.65□□□□□ -0.54
GABRE-205ENST00000465405 MAPK8IP3Q9UPT6 1336 aa11.65□□□□□ -0.54
GABRE-205ENST00000465405 KCNA3P22001 575 aa11.65□□□□□ -0.54
GABRE-205ENST00000465405 IL6STP40189 918 aaPredicted RBP11.65□□□□□ -0.54
GABRE-205ENST00000465405 BCS1LQ9Y276 419 aa11.65□□□□□ -0.54
GABRE-205ENST00000465405 BRCA1P38398 1863 aaKnown RBP11.65□□□□□ -0.54
GABRE-205ENST00000465405 KDM3BQ7LBC6 1761 aa11.64□□□□□ -0.55
GABRE-205ENST00000465405 NRXN2Q9P2S2 1712 aa11.64□□□□□ -0.55
GABRE-205ENST00000465405 SNRPA1P09661 255 aaKnown RBP11.64□□□□□ -0.55
GABRE-205ENST00000465405 CHRNA5P30532 468 aa11.64□□□□□ -0.55
GABRE-205ENST00000465405 BICDL1Q6ZP65 573 aa11.64□□□□□ -0.55
GABRE-205ENST00000465405 PNNQ9H307 717 aaKnown RBP11.64□□□□□ -0.55
GABRE-205ENST00000465405 SCN7AQ01118 1682 aa11.64□□□□□ -0.55
GABRE-205ENST00000465405 A0A087WZG4 1122 aa11.63□□□□□ -0.55
GABRE-205ENST00000465405 SERPINB2P05120 415 aa11.63□□□□□ -0.55
GABRE-205ENST00000465405 TBC1D9BQ66K14 1250 aa11.63□□□□□ -0.55
GABRE-205ENST00000465405 PRKRIP1Q9H875 184 aaPredicted RBP11.63□□□□□ -0.55
GABRE-205ENST00000465405 NBPF26B4DH59 902 aa11.62□□□□□ -0.55
GABRE-205ENST00000465405 CAMTA2O94983 1202 aa11.62□□□□□ -0.55
GABRE-205ENST00000465405 RIPK4P57078 832 aa11.62□□□□□ -0.55
GABRE-205ENST00000465405 NBPF10Q6P3W6 841 aaKnown RBP11.62□□□□□ -0.55
GABRE-205ENST00000465405 CCDC146Q8IYE0 955 aa11.62□□□□□ -0.55
GABRE-205ENST00000465405 NBPF15Q8N660 670 aa11.62□□□□□ -0.55
GABRE-205ENST00000465405 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
GABRE-205ENST00000465405 BCORQ6W2J9 1755 aa11.62□□□□□ -0.55
GABRE-205ENST00000465405 TMPOP42166 694 aaKnown RBP11.61□□□□□ -0.55
GABRE-205ENST00000465405 DZIP3Q86Y13 1208 aaKnown RBP11.61□□□□□ -0.55
GABRE-205ENST00000465405 PNISRQ8TF01 805 aaKnown RBP11.61□□□□□ -0.55
GABRE-205ENST00000465405 PIM2Q9P1W9 311 aa11.61□□□□□ -0.55
GABRE-205ENST00000465405 RRP7AQ9Y3A4 280 aaKnown RBP11.61□□□□□ -0.55
GABRE-205ENST00000465405 LAMB4A4D0S4 1761 aa11.61□□□□□ -0.55
GABRE-205ENST00000465405 ATP10DQ9P241 1426 aa11.6□□□□□ -0.55
GABRE-205ENST00000465405 ADCY9O60503 1353 aa11.6□□□□□ -0.55
GABRE-205ENST00000465405 EIF4A1P60842 406 aaKnown RBP11.6□□□□□ -0.55
GABRE-205ENST00000465405 NEUROD2Q15784 382 aa11.6□□□□□ -0.55
GABRE-205ENST00000465405 ARHGAP27Q6ZUM4 889 aa11.6□□□□□ -0.55
GABRE-205ENST00000465405 NPM2Q86SE8 214 aaKnown RBP11.6□□□□□ -0.55
GABRE-205ENST00000465405 CCDC24Q8N4L8 307 aa11.6□□□□□ -0.55
GABRE-205ENST00000465405 ADAMTS8Q9UP79 889 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms