RNA–Protein interactions for RNA: ENST00000465352.1

ABCA4-203, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 1,048 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-203ENST00000465352 BTBD11A6QL63 1104 aa19.05■□□□□ 0.64
ABCA4-203ENST00000465352 CANXP27824 592 aaKnown RBP19.05■□□□□ 0.64
ABCA4-203ENST00000465352 NPM2Q86SE8 214 aaKnown RBP19.05■□□□□ 0.64
ABCA4-203ENST00000465352 COL15A1P39059 1388 aa19.05■□□□□ 0.64
ABCA4-203ENST00000465352 CEMIPQ8WUJ3 1361 aa19.05■□□□□ 0.64
ABCA4-203ENST00000465352 HEG1Q9ULI3 1381 aa19.05■□□□□ 0.64
ABCA4-203ENST00000465352 PXDNLA1KZ92 1463 aa19.04■□□□□ 0.64
ABCA4-203ENST00000465352 ZNF496Q96IT1 587 aaPredicted RBP19.04■□□□□ 0.64
ABCA4-203ENST00000465352 BCS1LQ9Y276 419 aa19.04■□□□□ 0.64
ABCA4-203ENST00000465352 UBR2Q8IWV8 1755 aa19.04■□□□□ 0.64
ABCA4-203ENST00000465352 HTATSF1O43719 755 aaKnown RBP19.03■□□□□ 0.64
ABCA4-203ENST00000465352 GIGYF1O75420 1035 aaPredicted RBP19.03■□□□□ 0.64
ABCA4-203ENST00000465352 DPEP1P16444 411 aa19.03■□□□□ 0.64
ABCA4-203ENST00000465352 TM4SF1P30408 202 aa19.03■□□□□ 0.64
ABCA4-203ENST00000465352 PNNQ9H307 717 aaKnown RBP19.02■□□□□ 0.64
ABCA4-203ENST00000465352 POLRMTO00411 1230 aaKnown RBP19.01■□□□□ 0.63
ABCA4-203ENST00000465352 EIF5P55010 431 aaKnown RBP19.01■□□□□ 0.63
ABCA4-203ENST00000465352 DDR1Q08345 913 aa19.01■□□□□ 0.63
ABCA4-203ENST00000465352 PIM2Q9P1W9 311 aa19.01■□□□□ 0.63
ABCA4-203ENST00000465352 N4BP2Q86UW6 1770 aaPredicted RBP19.01■□□□□ 0.63
ABCA4-203ENST00000465352 SIPA1L3O60292 1781 aaPredicted RBP19■□□□□ 0.63
ABCA4-203ENST00000465352 C1QTNF8P60827 252 aa18.99■□□□□ 0.63
ABCA4-203ENST00000465352 MCM10Q7L590 875 aa18.99■□□□□ 0.63
ABCA4-203ENST00000465352 ZNF330Q9Y3S2 320 aaPredicted RBP18.99■□□□□ 0.63
ABCA4-203ENST00000465352 ATP10DQ9P241 1426 aa18.99■□□□□ 0.63
ABCA4-203ENST00000465352 IL6STP40189 918 aaPredicted RBP18.98■□□□□ 0.63
ABCA4-203ENST00000465352 NFIXQ14938 502 aa18.98■□□□□ 0.63
ABCA4-203ENST00000465352 RALBP1Q15311 655 aa18.98■□□□□ 0.63
ABCA4-203ENST00000465352 ARHGAP27Q6ZUM4 889 aa18.98■□□□□ 0.63
ABCA4-203ENST00000465352 GPBP1L1Q9HC44 474 aaPredicted RBP18.98■□□□□ 0.63
ABCA4-203ENST00000465352 DALRD3Q5D0E6 543 aaKnown RBP18.97■□□□□ 0.63
ABCA4-203ENST00000465352 KIAA1551Q9HCM1 1747 aa18.97■□□□□ 0.63
ABCA4-203ENST00000465352 KCNQ3O43525 872 aa18.96■□□□□ 0.63
ABCA4-203ENST00000465352 SERPINB2P05120 415 aa18.96■□□□□ 0.63
ABCA4-203ENST00000465352 SNRPA1P09661 255 aaKnown RBP18.96■□□□□ 0.63
ABCA4-203ENST00000465352 TAF7Q15545 349 aaPredicted RBP18.96■□□□□ 0.63
ABCA4-203ENST00000465352 BCL2L12Q9HB09 334 aa18.96■□□□□ 0.63
ABCA4-203ENST00000465352 A1BGP04217 495 aa18.95■□□□□ 0.62
ABCA4-203ENST00000465352 KCNA3P22001 575 aa18.95■□□□□ 0.62
ABCA4-203ENST00000465352 DCTN1Q14203 1278 aa18.95■□□□□ 0.62
ABCA4-203ENST00000465352 MAPK8IP3Q9UPT6 1336 aa18.95■□□□□ 0.62
ABCA4-203ENST00000465352 ADCY9O60503 1353 aa18.94■□□□□ 0.62
ABCA4-203ENST00000465352 BICDL1Q6ZP65 573 aa18.94■□□□□ 0.62
ABCA4-203ENST00000465352 PNISRQ8TF01 805 aaKnown RBP18.94■□□□□ 0.62
ABCA4-203ENST00000465352 TBC1D2BQ9UPU7 963 aa18.94■□□□□ 0.62
ABCA4-203ENST00000465352 CHRNA5P30532 468 aa18.93■□□□□ 0.62
ABCA4-203ENST00000465352 USP16Q9Y5T5 823 aa18.93■□□□□ 0.62
ABCA4-203ENST00000465352 DDX10Q13206 875 aaKnown RBP18.92■□□□□ 0.62
ABCA4-203ENST00000465352 NFE2L2Q16236 605 aa18.92■□□□□ 0.62
ABCA4-203ENST00000465352 ZNF526Q8TF50 670 aaPredicted RBP18.92■□□□□ 0.62
ABCA4-203ENST00000465352 BRCA1P38398 1863 aaKnown RBP18.92■□□□□ 0.62
ABCA4-203ENST00000465352 AFDNP55196 1824 aaKnown RBP18.91■□□□□ 0.62
ABCA4-203ENST00000465352 ARFGEF1Q9Y6D6 1849 aa18.91■□□□□ 0.62
ABCA4-203ENST00000465352 DZIP3Q86Y13 1208 aaKnown RBP18.91■□□□□ 0.62
ABCA4-203ENST00000465352 PLEKHF1Q96S99 279 aa18.91■□□□□ 0.62
ABCA4-203ENST00000465352 PDZRN3Q9UPQ7 1066 aa18.91■□□□□ 0.62
ABCA4-203ENST00000465352 SENP3-EIF4A1A0A087X0R7 540 aa18.9■□□□□ 0.62
ABCA4-203ENST00000465352 H0YIN7 160 aa18.9■□□□□ 0.62
ABCA4-203ENST00000465352 NPHP1O15259 732 aa18.9■□□□□ 0.62
ABCA4-203ENST00000465352 TBC1D9BQ66K14 1250 aa18.9■□□□□ 0.62
ABCA4-203ENST00000465352 SETDB2Q96T68 719 aa18.9■□□□□ 0.62
ABCA4-203ENST00000465352 ZNF652Q9Y2D9 606 aa18.89■□□□□ 0.61
ABCA4-203ENST00000465352 CARMIL3Q8ND23 1372 aa18.89■□□□□ 0.61
ABCA4-203ENST00000465352 NRXN2Q9P2S2 1712 aa18.88■□□□□ 0.61
ABCA4-203ENST00000465352 CAMTA2O94983 1202 aa18.88■□□□□ 0.61
ABCA4-203ENST00000465352 PDE6BP35913 854 aa18.88■□□□□ 0.61
ABCA4-203ENST00000465352 CLEC4GQ6UXB4 293 aa18.88■□□□□ 0.61
ABCA4-203ENST00000465352 C2CD5Q86YS7 1000 aa18.88■□□□□ 0.61
ABCA4-203ENST00000465352 TTLL6Q8N841 843 aa18.88■□□□□ 0.61
ABCA4-203ENST00000465352 DLG5Q8TDM6 1919 aa18.87■□□□□ 0.61
ABCA4-203ENST00000465352 MYBBP1AQ9BQG0 1328 aaKnown RBP18.87■□□□□ 0.61
ABCA4-203ENST00000465352 MIS18AQ9NYP9 233 aa18.87■□□□□ 0.61
ABCA4-203ENST00000465352 PRAMEF22A3QJZ6 481 aa18.86■□□□□ 0.61
ABCA4-203ENST00000465352 C9orf131Q5VYM1 1079 aa18.86■□□□□ 0.61
ABCA4-203ENST00000465352 BRIP1Q9BX63 1249 aa18.86■□□□□ 0.61
ABCA4-203ENST00000465352 SCN7AQ01118 1682 aa18.85■□□□□ 0.61
ABCA4-203ENST00000465352 RGL2O15211 777 aa18.85■□□□□ 0.61
ABCA4-203ENST00000465352 PIP4K2AP48426 406 aaPredicted RBP18.85■□□□□ 0.61
ABCA4-203ENST00000465352 ST5P78524 1137 aa18.85■□□□□ 0.61
ABCA4-203ENST00000465352 CNBD1Q8NA66 436 aa18.85■□□□□ 0.61
ABCA4-203ENST00000465352 LMOD3Q0VAK6 560 aa18.84■□□□□ 0.61
ABCA4-203ENST00000465352 PRR5LQ6MZQ0 368 aa18.84■□□□□ 0.61
ABCA4-203ENST00000465352 RNF181Q9P0P0 153 aa18.84■□□□□ 0.61
ABCA4-203ENST00000465352 RIPK4P57078 832 aa18.83■□□□□ 0.6
ABCA4-203ENST00000465352 ZNF622Q969S3 477 aaKnown RBP eCLIP18.83■□□□□ 0.6
ABCA4-203ENST00000465352 NBPF26B4DH59 902 aa18.82■□□□□ 0.6
ABCA4-203ENST00000465352 EIF4A1P60842 406 aaKnown RBP18.82■□□□□ 0.6
ABCA4-203ENST00000465352 WDR43Q15061 677 aaKnown RBP eCLIP18.82■□□□□ 0.6
ABCA4-203ENST00000465352 NBPF10Q6P3W6 841 aaKnown RBP18.82■□□□□ 0.6
ABCA4-203ENST00000465352 NBPF5PQ86XG9 351 aaPredicted RBP18.82■□□□□ 0.6
ABCA4-203ENST00000465352 NBPF15Q8N660 670 aa18.82■□□□□ 0.6
ABCA4-203ENST00000465352 THUMPD2Q9BTF0 503 aaKnown RBP18.81■□□□□ 0.6
ABCA4-203ENST00000465352 KIF3CO14782 793 aa18.8■□□□□ 0.6
ABCA4-203ENST00000465352 TMPOP42166 694 aaKnown RBP18.8■□□□□ 0.6
ABCA4-203ENST00000465352 TPTE2Q6XPS3 522 aa18.8■□□□□ 0.6
ABCA4-203ENST00000465352 BABAM1Q9NWV8 329 aa18.8■□□□□ 0.6
ABCA4-203ENST00000465352 TSPYL4Q9UJ04 414 aa18.8■□□□□ 0.6
ABCA4-203ENST00000465352 NIP7Q9Y221 180 aaKnown RBP eCLIP18.8■□□□□ 0.6
ABCA4-203ENST00000465352 BCORQ6W2J9 1755 aa18.8■□□□□ 0.6
ABCA4-203ENST00000465352 DLEC1Q9Y238 1755 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms