RNA–Protein interactions for RNA: ENST00000465292.5

KCNS3-204, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

TSL 4

Gene KCNS3, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-204ENST00000465292 NEFMP07197 916 aa28.87■■■□□ 2.21
KCNS3-204ENST00000465292 TGFB2P61812 414 aa28.87■■■□□ 2.21
KCNS3-204ENST00000465292 DCTN1Q14203 1278 aa28.87■■■□□ 2.21
KCNS3-204ENST00000465292 TEX13AQ9BXU3 409 aaPredicted RBP28.87■■■□□ 2.21
KCNS3-204ENST00000465292 A0A0G2JLW4 131 aa28.86■■■□□ 2.21
KCNS3-204ENST00000465292 NARFQ9UHQ1 456 aa28.86■■■□□ 2.21
KCNS3-204ENST00000465292 COL15A1P39059 1388 aa28.86■■■□□ 2.21
KCNS3-204ENST00000465292 DDR1Q08345 913 aa28.85■■■□□ 2.21
KCNS3-204ENST00000465292 UBR2Q8IWV8 1755 aa28.85■■■□□ 2.21
KCNS3-204ENST00000465292 HTATSF1O43719 755 aaKnown RBP28.84■■■□□ 2.21
KCNS3-204ENST00000465292 TM4SF1P30408 202 aa28.84■■■□□ 2.21
KCNS3-204ENST00000465292 RALBP1Q15311 655 aa28.84■■■□□ 2.21
KCNS3-204ENST00000465292 C10orf71Q711Q0 1435 aa28.83■■■□□ 2.21
KCNS3-204ENST00000465292 DPEP1P16444 411 aa28.82■■■□□ 2.2
KCNS3-204ENST00000465292 ZNF330Q9Y3S2 320 aaPredicted RBP28.82■■■□□ 2.2
KCNS3-204ENST00000465292 PXDNLA1KZ92 1463 aa28.82■■■□□ 2.2
KCNS3-204ENST00000465292 SIPA1L3O60292 1781 aaPredicted RBP28.82■■■□□ 2.2
KCNS3-204ENST00000465292 EIF5P55010 431 aaKnown RBP28.81■■■□□ 2.2
KCNS3-204ENST00000465292 POLRMTO00411 1230 aaKnown RBP28.8■■■□□ 2.2
KCNS3-204ENST00000465292 A1BGP04217 495 aa28.8■■■□□ 2.2
KCNS3-204ENST00000465292 PLEKHF1Q96S99 279 aa28.8■■■□□ 2.2
KCNS3-204ENST00000465292 A0A087WZG4 1122 aa28.79■■■□□ 2.2
KCNS3-204ENST00000465292 PNNQ9H307 717 aaKnown RBP28.79■■■□□ 2.2
KCNS3-204ENST00000465292 BCL2L12Q9HB09 334 aa28.79■■■□□ 2.2
KCNS3-204ENST00000465292 BCS1LQ9Y276 419 aa28.79■■■□□ 2.2
KCNS3-204ENST00000465292 NFIXQ14938 502 aa28.78■■■□□ 2.2
KCNS3-204ENST00000465292 TAF7Q15545 349 aaPredicted RBP28.77■■■□□ 2.2
KCNS3-204ENST00000465292 USP16Q9Y5T5 823 aa28.77■■■□□ 2.2
KCNS3-204ENST00000465292 KIF13BQ9NQT8 1826 aa28.76■■■□□ 2.19
KCNS3-204ENST00000465292 NPM2Q86SE8 214 aaKnown RBP28.76■■■□□ 2.19
KCNS3-204ENST00000465292 MIS18AQ9NYP9 233 aa28.76■■■□□ 2.19
KCNS3-204ENST00000465292 TBC1D2BQ9UPU7 963 aa28.76■■■□□ 2.19
KCNS3-204ENST00000465292 MAPK8IP3Q9UPT6 1336 aa28.75■■■□□ 2.19
KCNS3-204ENST00000465292 PRAMEF22A3QJZ6 481 aa28.75■■■□□ 2.19
KCNS3-204ENST00000465292 IL6STP40189 918 aaPredicted RBP28.75■■■□□ 2.19
KCNS3-204ENST00000465292 NFE2L2Q16236 605 aa28.75■■■□□ 2.19
KCNS3-204ENST00000465292 N4BP2Q86UW6 1770 aaPredicted RBP28.75■■■□□ 2.19
KCNS3-204ENST00000465292 SNRPA1P09661 255 aaKnown RBP28.74■■■□□ 2.19
KCNS3-204ENST00000465292 KCNA3P22001 575 aa28.74■■■□□ 2.19
KCNS3-204ENST00000465292 BICDL1Q6ZP65 573 aa28.74■■■□□ 2.19
KCNS3-204ENST00000465292 SERPINB2P05120 415 aa28.72■■■□□ 2.19
KCNS3-204ENST00000465292 PIP4K2AP48426 406 aaPredicted RBP28.72■■■□□ 2.19
KCNS3-204ENST00000465292 PIM2Q9P1W9 311 aa28.72■■■□□ 2.19
KCNS3-204ENST00000465292 KIAA1551Q9HCM1 1747 aa28.72■■■□□ 2.19
KCNS3-204ENST00000465292 MYBBP1AQ9BQG0 1328 aaKnown RBP28.71■■■□□ 2.19
KCNS3-204ENST00000465292 CHRNA5P30532 468 aa28.71■■■□□ 2.19
KCNS3-204ENST00000465292 THUMPD2Q9BTF0 503 aaKnown RBP28.7■■■□□ 2.18
KCNS3-204ENST00000465292 ARHGAP27Q6ZUM4 889 aa28.69■■■□□ 2.18
KCNS3-204ENST00000465292 TBC1D9BQ66K14 1250 aa28.68■■■□□ 2.18
KCNS3-204ENST00000465292 PNISRQ8TF01 805 aaKnown RBP28.68■■■□□ 2.18
KCNS3-204ENST00000465292 DALRD3Q5D0E6 543 aaKnown RBP28.67■■■□□ 2.18
KCNS3-204ENST00000465292 DZIP3Q86Y13 1208 aaKnown RBP28.66■■■□□ 2.18
KCNS3-204ENST00000465292 ATP10DQ9P241 1426 aa28.66■■■□□ 2.18
KCNS3-204ENST00000465292 GIGYF1O75420 1035 aaPredicted RBP28.64■■■□□ 2.18
KCNS3-204ENST00000465292 CAMTA2O94983 1202 aa28.64■■■□□ 2.18
KCNS3-204ENST00000465292 RIPK4P57078 832 aa28.64■■■□□ 2.18
KCNS3-204ENST00000465292 ZNF526Q8TF50 670 aaPredicted RBP28.64■■■□□ 2.18
KCNS3-204ENST00000465292 SETDB2Q96T68 719 aa28.62■■■□□ 2.17
KCNS3-204ENST00000465292 DLG5Q8TDM6 1919 aa28.62■■■□□ 2.17
KCNS3-204ENST00000465292 NBPF26B4DH59 902 aa28.61■■■□□ 2.17
KCNS3-204ENST00000465292 NBPF10Q6P3W6 841 aaKnown RBP28.61■■■□□ 2.17
KCNS3-204ENST00000465292 NBPF15Q8N660 670 aa28.61■■■□□ 2.17
KCNS3-204ENST00000465292 GPBP1L1Q9HC44 474 aaPredicted RBP28.61■■■□□ 2.17
KCNS3-204ENST00000465292 C1QTNF8P60827 252 aa28.6■■■□□ 2.17
KCNS3-204ENST00000465292 WDR43Q15061 677 aaKnown RBP eCLIP28.6■■■□□ 2.17
KCNS3-204ENST00000465292 CCDC146Q8IYE0 955 aa28.6■■■□□ 2.17
KCNS3-204ENST00000465292 ADCY9O60503 1353 aa28.6■■■□□ 2.17
KCNS3-204ENST00000465292 AFDNP55196 1824 aaKnown RBP28.59■■■□□ 2.17
KCNS3-204ENST00000465292 TMPOP42166 694 aaKnown RBP28.59■■■□□ 2.17
KCNS3-204ENST00000465292 EIF4A1P60842 406 aaKnown RBP28.59■■■□□ 2.17
KCNS3-204ENST00000465292 C2CD5Q86YS7 1000 aa28.59■■■□□ 2.17
KCNS3-204ENST00000465292 CCDC24Q8N4L8 307 aa28.59■■■□□ 2.17
KCNS3-204ENST00000465292 PRKRIP1Q9H875 184 aaPredicted RBP28.59■■■□□ 2.17
KCNS3-204ENST00000465292 RRP7AQ9Y3A4 280 aaKnown RBP28.58■■■□□ 2.17
KCNS3-204ENST00000465292 CARMIL3Q8ND23 1372 aa28.58■■■□□ 2.17
KCNS3-204ENST00000465292 H0YIN7 160 aa28.57■■■□□ 2.16
KCNS3-204ENST00000465292 NPHP1O15259 732 aa28.57■■■□□ 2.16
KCNS3-204ENST00000465292 NEUROD2Q15784 382 aa28.57■■■□□ 2.16
KCNS3-204ENST00000465292 NRXN2Q9P2S2 1712 aa28.57■■■□□ 2.16
KCNS3-204ENST00000465292 ZEB1P37275 1124 aaPredicted RBP28.56■■■□□ 2.16
KCNS3-204ENST00000465292 BRCA1P38398 1863 aaKnown RBP28.56■■■□□ 2.16
KCNS3-204ENST00000465292 PRR5LQ6MZQ0 368 aa28.56■■■□□ 2.16
KCNS3-204ENST00000465292 TSPYL4Q9UJ04 414 aa28.56■■■□□ 2.16
KCNS3-204ENST00000465292 SCN7AQ01118 1682 aa28.55■■■□□ 2.16
KCNS3-204ENST00000465292 CLEC4GQ6UXB4 293 aa28.55■■■□□ 2.16
KCNS3-204ENST00000465292 NGEFQ8N5V2 710 aa28.55■■■□□ 2.16
KCNS3-204ENST00000465292 ZNF652Q9Y2D9 606 aa28.55■■■□□ 2.16
KCNS3-204ENST00000465292 LMOD3Q0VAK6 560 aa28.54■■■□□ 2.16
KCNS3-204ENST00000465292 BRIP1Q9BX63 1249 aa28.54■■■□□ 2.16
KCNS3-204ENST00000465292 ADAMTS8Q9UP79 889 aa28.54■■■□□ 2.16
KCNS3-204ENST00000465292 PDE6BP35913 854 aa28.53■■■□□ 2.16
KCNS3-204ENST00000465292 TTLL6Q8N841 843 aa28.53■■■□□ 2.16
KCNS3-204ENST00000465292 CNBD1Q8NA66 436 aa28.53■■■□□ 2.16
KCNS3-204ENST00000465292 RUNDC1Q96C34 613 aa28.53■■■□□ 2.16
KCNS3-204ENST00000465292 C9orf131Q5VYM1 1079 aa28.52■■■□□ 2.16
KCNS3-204ENST00000465292 KDM3BQ7LBC6 1761 aa28.52■■■□□ 2.16
KCNS3-204ENST00000465292 ZNF622Q969S3 477 aaKnown RBP eCLIP28.51■■■□□ 2.15
KCNS3-204ENST00000465292 ST5P78524 1137 aa28.5■■■□□ 2.15
KCNS3-204ENST00000465292 NBPF5PQ86XG9 351 aaPredicted RBP28.5■■■□□ 2.15
KCNS3-204ENST00000465292 ARFGEF1Q9Y6D6 1849 aa28.49■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms