RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-225ENST00000465158 DIAPH1O60610 1272 aaKnown RBP8.86□□□□□ -0.99
RBM39-225ENST00000465158 TNNT2P45379 298 aaPredicted RBP8.86□□□□□ -0.99
RBM39-225ENST00000465158 COPS2P61201 443 aa8.86□□□□□ -0.99
RBM39-225ENST00000465158 SWT1Q5T5J6 900 aaKnown RBP8.86□□□□□ -0.99
RBM39-225ENST00000465158 SMYD5Q6GMV2 418 aa8.86□□□□□ -0.99
RBM39-225ENST00000465158 BRINP3Q76B58 766 aa8.86□□□□□ -0.99
RBM39-225ENST00000465158 PHRF1Q9P1Y6 1649 aaKnown RBP8.86□□□□□ -0.99
RBM39-225ENST00000465158 RTL1A6NKG5 1358 aa8.86□□□□□ -0.99
RBM39-225ENST00000465158 SOS2Q07890 1332 aaPredicted RBP8.85□□□□□ -0.99
RBM39-225ENST00000465158 ZNF787Q6DD87 383 aa8.85□□□□□ -0.99
RBM39-225ENST00000465158 LRRC59Q96AG4 307 aaKnown RBP8.85□□□□□ -0.99
RBM39-225ENST00000465158 POLKQ9UBT6 870 aa8.85□□□□□ -0.99
RBM39-225ENST00000465158 LTN1O94822 1766 aa8.85□□□□□ -0.99
RBM39-225ENST00000465158 TNS3Q68CZ2 1445 aa8.85□□□□□ -0.99
RBM39-225ENST00000465158 FLT4P35916 1363 aa8.85□□□□□ -0.99
RBM39-225ENST00000465158 ABCC6O95255 1503 aa8.85□□□□□ -0.99
RBM39-225ENST00000465158 SPATA31A3Q5VYP0 1347 aa8.84□□□□□ -0.99
RBM39-225ENST00000465158 PXDNQ92626 1479 aa8.84□□□□□ -0.99
RBM39-225ENST00000465158 AMPHP49418 695 aa8.84□□□□□ -0.99
RBM39-225ENST00000465158 TMUB1Q9BVT8 246 aa8.84□□□□□ -0.99
RBM39-225ENST00000465158 ROBO1Q9Y6N7 1651 aa8.84□□□□□ -0.99
RBM39-225ENST00000465158 AHDC1Q5TGY3 1603 aaPredicted RBP8.83□□□□□ -1
RBM39-225ENST00000465158 USP19O94966 1318 aa8.83□□□□□ -1
RBM39-225ENST00000465158 MARF1Q9Y4F3 1742 aaKnown RBP8.83□□□□□ -1
RBM39-225ENST00000465158 MED1Q15648 1581 aaPredicted RBP8.83□□□□□ -1
RBM39-225ENST00000465158 FCHSD2O94868 740 aa8.83□□□□□ -1
RBM39-225ENST00000465158 GCP02774 474 aa8.83□□□□□ -1
RBM39-225ENST00000465158 SLC4A3P48751 1232 aa8.83□□□□□ -1
RBM39-225ENST00000465158 RBM26Q5T8P6 1007 aaKnown RBP8.83□□□□□ -1
RBM39-225ENST00000465158 LMOD2Q6P5Q4 547 aa8.83□□□□□ -1
RBM39-225ENST00000465158 SLIT3O75094 1523 aa8.83□□□□□ -1
RBM39-225ENST00000465158 PPM1GO15355 546 aaPredicted RBP8.82□□□□□ -1
RBM39-225ENST00000465158 ZPR1O75312 459 aa8.82□□□□□ -1
RBM39-225ENST00000465158 HNRNPUQ00839 825 aaKnown RBP eCLIP8.82□□□□□ -1
RBM39-225ENST00000465158 PDE3BQ13370 1112 aa8.82□□□□□ -1
RBM39-225ENST00000465158 SHPRHQ149N8 1683 aa8.81□□□□□ -1
RBM39-225ENST00000465158 FAM208AQ9UK61 1670 aaKnown RBP8.81□□□□□ -1
RBM39-225ENST00000465158 ZBED9Q6R2W3 1325 aa8.81□□□□□ -1
RBM39-225ENST00000465158 BLMP54132 1417 aaPredicted RBP8.81□□□□□ -1
RBM39-225ENST00000465158 PHLPP1O60346 1717 aa8.81□□□□□ -1
RBM39-225ENST00000465158 U2AF1L5P0DN76 240 aaPredicted RBP8.81□□□□□ -1
RBM39-225ENST00000465158 U2AF1Q01081 240 aaKnown RBP eCLIP8.81□□□□□ -13e-7■□□□□ 9.7
RBM39-225ENST00000465158 CCDC184Q52MB2 194 aa8.81□□□□□ -1
RBM39-225ENST00000465158 IP6K1Q92551 441 aa8.81□□□□□ -1
RBM39-225ENST00000465158 RUNDC1Q96C34 613 aa8.81□□□□□ -1
RBM39-225ENST00000465158 EYA1Q99502 592 aa8.81□□□□□ -1
RBM39-225ENST00000465158 ADAMTS8Q9UP79 889 aa8.81□□□□□ -1
RBM39-225ENST00000465158 UBAP1LF5GYI3 381 aa8.8□□□□□ -1
RBM39-225ENST00000465158 YTHDC1Q96MU7 727 aaKnown RBP8.8□□□□□ -1
RBM39-225ENST00000465158 PRR14Q9BWN1 585 aa8.8□□□□□ -1
RBM39-225ENST00000465158 CPDO75976 1380 aa8.8□□□□□ -1
RBM39-225ENST00000465158 PLEKHG2Q9H7P9 1386 aa8.8□□□□□ -1
RBM39-225ENST00000465158 NFAT5O94916 1531 aa8.8□□□□□ -1
RBM39-225ENST00000465158 MAP3K19Q56UN5 1328 aa8.8□□□□□ -1
RBM39-225ENST00000465158 MAPK8IP3Q9UPT6 1336 aa8.8□□□□□ -1
RBM39-225ENST00000465158 COL3A1P02461 1466 aaPredicted RBP8.79□□□□□ -1
RBM39-225ENST00000465158 U2SURPO15042 1029 aaKnown RBP8.79□□□□□ -1
RBM39-225ENST00000465158 RRS1Q15050 365 aaKnown RBP8.79□□□□□ -1
RBM39-225ENST00000465158 ARHGEF25Q86VW2 580 aa8.79□□□□□ -1
RBM39-225ENST00000465158 PCDHB3Q9Y5E6 796 aa8.79□□□□□ -1
RBM39-225ENST00000465158 ADGRG1Q9Y653 693 aa8.79□□□□□ -1
RBM39-225ENST00000465158 EMILIN1Q9Y6C2 1016 aa8.79□□□□□ -1
RBM39-225ENST00000465158 CRYBG1Q9Y4K1 1723 aa8.79□□□□□ -1
RBM39-225ENST00000465158 COL22A1Q8NFW1 1626 aaPredicted RBP8.79□□□□□ -1
RBM39-225ENST00000465158 GPR37O15354 613 aa8.78□□□□□ -1
RBM39-225ENST00000465158 HOXC9P31274 260 aa8.78□□□□□ -1
RBM39-225ENST00000465158 IL13P35225 146 aa8.78□□□□□ -1
RBM39-225ENST00000465158 XPCQ01831 940 aaPredicted RBP8.78□□□□□ -1
RBM39-225ENST00000465158 CALD1Q05682 793 aaKnown RBP8.78□□□□□ -1
RBM39-225ENST00000465158 LMOD3Q0VAK6 560 aa8.78□□□□□ -1
RBM39-225ENST00000465158 HIC1Q14526 733 aa8.78□□□□□ -1
RBM39-225ENST00000465158 NUTM2GQ5VZR2 741 aa8.78□□□□□ -1
RBM39-225ENST00000465158 CCDC27Q2M243 656 aa8.77□□□□□ -1.01
RBM39-225ENST00000465158 EIF4A2Q14240 407 aaKnown RBP8.76□□□□□ -1.01
RBM39-225ENST00000465158 ZNF775Q96BV0 537 aaPredicted RBP8.76□□□□□ -1.01
RBM39-225ENST00000465158 RGPD1P0DJD0 1748 aa8.76□□□□□ -1.01
RBM39-225ENST00000465158 ABCA3Q99758 1704 aa8.76□□□□□ -1.01
RBM39-225ENST00000465158 PEAK1Q9H792 1746 aa8.76□□□□□ -1.01
RBM39-225ENST00000465158 RNF223E7ERA6 249 aa8.75□□□□□ -1.01
RBM39-225ENST00000465158 SLC19A1P41440 591 aa8.75□□□□□ -1.01
RBM39-225ENST00000465158 HSP90AB2PQ58FF8 381 aa8.75□□□□□ -1.01
RBM39-225ENST00000465158 BLOC1S3Q6QNY0 202 aa8.75□□□□□ -1.01
RBM39-225ENST00000465158 RBM46Q8TBY0 533 aaKnown RBP8.75□□□□□ -1.01
RBM39-225ENST00000465158 RGPD5Q99666 1765 aa8.75□□□□□ -1.01
RBM39-225ENST00000465158 COL16A1Q07092 1604 aaPredicted RBP8.75□□□□□ -1.01
RBM39-225ENST00000465158 IGSF1Q8N6C5 1336 aa8.75□□□□□ -1.01
RBM39-225ENST00000465158 KDRP35968 1356 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 COL18A1P39060 1754 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 COL14A1Q05707 1796 aaKnown RBP8.74□□□□□ -1.01
RBM39-225ENST00000465158 GNPATO15228 680 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 PIP4K2BP78356 416 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 FAM161AQ3B820 660 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 AMOTQ4VCS5 1084 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 PKDCCQ504Y2 493 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 TRIM67Q6ZTA4 783 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 WDR63Q8IWG1 891 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 TCP11L2Q8N4U5 519 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 DDX17Q92841 729 aaKnown RBP8.74□□□□□ -1.01
RBM39-225ENST00000465158 PRDM11Q9NQV5 511 aa8.74□□□□□ -1.01
RBM39-225ENST00000465158 JCADQ9P266 1359 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms