RNA–Protein interactions for RNA: ENST00000465089.2

PBX1-204, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best)

Gene PBX1, Length 11,321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-204ENST00000465089 KRT18P05783 430 aaKnown RBP8.59□□□□□ -1.03
PBX1-204ENST00000465089 MUM1L1Q5H9M0 696 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 KIRREL3Q8IZU9 778 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 IFIT2P09913 472 aaKnown RBP8.59□□□□□ -1.03
PBX1-204ENST00000465089 AMPD3Q01432 767 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 RBM33Q96EV2 1170 aaKnown RBP8.59□□□□□ -1.03
PBX1-204ENST00000465089 DRC1Q96MC2 740 aa8.59□□□□□ -1.03
PBX1-204ENST00000465089 POGZQ7Z3K3 1410 aa8.59□□□□□ -1.04
PBX1-204ENST00000465089 BIRC2Q13490 618 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 PRDM2Q13029 1718 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 NAP1L3Q99457 506 aaPredicted RBP8.58□□□□□ -1.04
PBX1-204ENST00000465089 TBC1D2BQ9UPU7 963 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 IKBKGQ9Y6K9 419 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 C16orf72Q14CZ0 275 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 OLFML2BQ68BL8 750 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 CUL4BQ13620 913 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 CCDC124Q96CT7 223 aaKnown RBP8.58□□□□□ -1.04
PBX1-204ENST00000465089 ZBED9Q6R2W3 1325 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 NMIQ13287 307 aaPredicted RBP8.58□□□□□ -1.04
PBX1-204ENST00000465089 ATF7IPQ6VMQ6 1270 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 MTUS1Q9ULD2 1270 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 CTAGE5O15320 804 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 KLHL10Q6JEL2 608 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 TMED8Q6PL24 325 aaPredicted RBP8.58□□□□□ -1.04
PBX1-204ENST00000465089 ALS2CR12Q96Q35 445 aa8.58□□□□□ -1.04
PBX1-204ENST00000465089 NCOA2Q15596 1464 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 HECW1Q76N89 1606 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 STIM2Q9P246 746 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 ANAPC4Q9UJX5 808 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 PFDN6O15212 129 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 RRP9O43818 475 aaKnown RBP8.57□□□□□ -1.04
PBX1-204ENST00000465089 MGEA5O60502 916 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 TBCAO75347 108 aaKnown RBP8.57□□□□□ -1.04
PBX1-204ENST00000465089 CSRNP2Q9H175 543 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 GBP1P32455 592 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 CRACR2AQ9BSW2 395 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 DAAM1Q9Y4D1 1078 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 NCAPD3P42695 1498 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 MRE11P49959 708 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 TMCO5AQ8N6Q1 288 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 ESPNB1AK53 854 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 ANKRD13AQ8IZ07 590 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 CCDC192P0DO97 292 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 GSDMDP57764 484 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 BIN2Q9UBW5 565 aaPredicted RBP8.57□□□□□ -1.04
PBX1-204ENST00000465089 CCDC9Q9Y3X0 531 aaKnown RBP8.57□□□□□ -1.04
PBX1-204ENST00000465089 DDX5P17844 614 aaKnown RBP8.57□□□□□ -1.04
PBX1-204ENST00000465089 THOC7Q6I9Y2 204 aaKnown RBP8.57□□□□□ -1.04
PBX1-204ENST00000465089 CTAGE1Q96RT6 745 aa8.57□□□□□ -1.04
PBX1-204ENST00000465089 FEZ2Q9UHY8 353 aaPredicted RBP8.57□□□□□ -1.04
PBX1-204ENST00000465089 E2F5Q15329 346 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 SMARCC2Q8TAQ2 1214 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 TIGD1Q96MW7 591 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 GLT8D2Q9H1C3 349 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 CCDC69A6NI79 296 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 GTF2E1P29083 439 aaPredicted RBP8.56□□□□□ -1.04
PBX1-204ENST00000465089 CALR3Q96L12 384 aaKnown RBP8.56□□□□□ -1.04
PBX1-204ENST00000465089 PRC1O43663 620 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 UBE4BO95155 1302 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 PFDN1O60925 122 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 PDXDC1Q6P996 788 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 SMC3Q9UQE7 1217 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 EIF2AK4Q9P2K8 1649 aaKnown RBP8.56□□□□□ -1.04
PBX1-204ENST00000465089 MYO1BO43795 1136 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 DYNC1I1O14576 645 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 PNISRQ8TF01 805 aaKnown RBP8.56□□□□□ -1.04
PBX1-204ENST00000465089 CPSF2Q9P2I0 782 aaKnown RBP8.56□□□□□ -1.04
PBX1-204ENST00000465089 AQRO60306 1485 aaKnown RBP eCLIP8.56□□□□□ -1.04
PBX1-204ENST00000465089 NFKBIAP25963 317 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 SPECC1Q5M775 1068 aa8.56□□□□□ -1.04
PBX1-204ENST00000465089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.56□□□□□ -1.04
PBX1-204ENST00000465089 NOL7Q9UMY1 257 aaKnown RBP8.56□□□□□ -1.04
PBX1-204ENST00000465089 ZNF777Q9ULD5 760 aaPredicted RBP8.56□□□□□ -1.04
PBX1-204ENST00000465089 LUC7L2Q9Y383 392 aaKnown RBP8.56□□□□□ -1.04
PBX1-204ENST00000465089 PABPN1Q86U42 306 aaKnown RBP eCLIP8.55□□□□□ -1.04
PBX1-204ENST00000465089 RASAL2Q9UJF2 1139 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 SLMAPQ14BN4 828 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 IFT74Q96LB3 600 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 LRSAM1Q6UWE0 723 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 CCDC160A6NGH7 325 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 SLC4A3P48751 1232 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 ODF2LQ9ULJ1 636 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 FAM43AQ8N2R8 423 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 MIS12Q9H081 205 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 DAPK3O43293 454 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 VPS53Q5VIR6 699 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 CCDC174Q6PII3 467 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 CCDC170Q8IYT3 715 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 ZNF713Q8N859 430 aaPredicted RBP8.55□□□□□ -1.04
PBX1-204ENST00000465089 ITGB1BP2Q9UKP3 347 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 GOLGA8IPA6NC78 632 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 MYOM3Q5VTT5 1437 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 SMC1BQ8NDV3 1235 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 JAKMIP1Q96N16 626 aaKnown RBP8.55□□□□□ -1.04
PBX1-204ENST00000465089 TSG101Q99816 390 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 ABCF3Q9NUQ8 709 aa8.55□□□□□ -1.04
PBX1-204ENST00000465089 MAP2K1Q02750 393 aaPredicted RBP8.54□□□□□ -1.04
PBX1-204ENST00000465089 EVC2Q86UK5 1308 aa8.54□□□□□ -1.04
PBX1-204ENST00000465089 CKAP4Q07065 602 aaKnown RBP8.54□□□□□ -1.04
PBX1-204ENST00000465089 PHLDB2Q86SQ0 1253 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms