RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ZBTB1Q9Y2K1 713 aa30.66■■■□□ 2.5
USP42-205ENST00000465073 HSPA6P17066 643 aa30.65■■■□□ 2.5
USP42-205ENST00000465073 TTC5Q8N0Z6 440 aa30.65■■■□□ 2.5
USP42-205ENST00000465073 COL15A1P39059 1388 aa30.65■■■□□ 2.5
USP42-205ENST00000465073 GNAT3A8MTJ3 354 aa30.64■■■□□ 2.5
USP42-205ENST00000465073 BRCA1P38398 1863 aaKnown RBP30.64■■■□□ 2.5
USP42-205ENST00000465073 STARD3NLO95772 234 aa30.63■■■□□ 2.49
USP42-205ENST00000465073 CHRNA5P30532 468 aa30.63■■■□□ 2.49
USP42-205ENST00000465073 TEFQ10587 303 aa30.63■■■□□ 2.49
USP42-205ENST00000465073 NFIXQ14938 502 aa30.63■■■□□ 2.49
USP42-205ENST00000465073 IL17REQ8NFR9 667 aa30.63■■■□□ 2.49
USP42-205ENST00000465073 VIRMAQ69YN4 1812 aaKnown RBP30.61■■■□□ 2.49
USP42-205ENST00000465073 C9orf131Q5VYM1 1079 aa30.6■■■□□ 2.49
USP42-205ENST00000465073 CANXP27824 592 aaKnown RBP30.59■■■□□ 2.49
USP42-205ENST00000465073 CFAP53Q96M91 514 aa30.59■■■□□ 2.49
USP42-205ENST00000465073 TEX13AQ9BXU3 409 aaPredicted RBP30.59■■■□□ 2.49
USP42-205ENST00000465073 BCL2L12Q9HB09 334 aa30.59■■■□□ 2.49
USP42-205ENST00000465073 ZNF790Q6PG37 636 aa30.58■■■□□ 2.49
USP42-205ENST00000465073 ARFGEF1Q9Y6D6 1849 aa30.58■■■□□ 2.49
USP42-205ENST00000465073 EIF5P55010 431 aaKnown RBP30.57■■■□□ 2.48
USP42-205ENST00000465073 ZNF496Q96IT1 587 aaPredicted RBP30.57■■■□□ 2.48
USP42-205ENST00000465073 UBR2Q8IWV8 1755 aa30.57■■■□□ 2.48
USP42-205ENST00000465073 A0A087WZG4 1122 aa30.57■■■□□ 2.48
USP42-205ENST00000465073 SERPINB2P05120 415 aa30.57■■■□□ 2.48
USP42-205ENST00000465073 HEG1Q9ULI3 1381 aa30.55■■■□□ 2.48
USP42-205ENST00000465073 TOMM70O94826 608 aa30.55■■■□□ 2.48
USP42-205ENST00000465073 PRKAR2BP31323 418 aa30.53■■■□□ 2.48
USP42-205ENST00000465073 NMRK2Q9NPI5 230 aa30.53■■■□□ 2.48
USP42-205ENST00000465073 NUDCQ9Y266 331 aa30.53■■■□□ 2.48
USP42-205ENST00000465073 CEMIPQ8WUJ3 1361 aa30.52■■■□□ 2.48
USP42-205ENST00000465073 PHACTR3Q96KR7 559 aa30.52■■■□□ 2.48
USP42-205ENST00000465073 RSPH6AQ9H0K4 717 aa30.52■■■□□ 2.48
USP42-205ENST00000465073 RNF181Q9P0P0 153 aa30.52■■■□□ 2.48
USP42-205ENST00000465073 FMNL2Q96PY5 1086 aa30.51■■■□□ 2.48
USP42-205ENST00000465073 NRXN2Q9P2S2 1712 aa30.49■■■□□ 2.47
USP42-205ENST00000465073 BICDL1Q6ZP65 573 aa30.49■■■□□ 2.47
USP42-205ENST00000465073 IL6STP40189 918 aaPredicted RBP30.48■■■□□ 2.47
USP42-205ENST00000465073 AFDNP55196 1824 aaKnown RBP30.48■■■□□ 2.47
USP42-205ENST00000465073 KDM2BQ8NHM5 1336 aa30.48■■■□□ 2.47
USP42-205ENST00000465073 BTBD11A6QL63 1104 aa30.47■■■□□ 2.47
USP42-205ENST00000465073 TTLL6Q8N841 843 aa30.47■■■□□ 2.47
USP42-205ENST00000465073 H0YIN7 160 aa30.46■■■□□ 2.47
USP42-205ENST00000465073 PPP2R1AP30153 589 aa30.46■■■□□ 2.47
USP42-205ENST00000465073 APLP1P51693 650 aa30.46■■■□□ 2.47
USP42-205ENST00000465073 C2CD5Q86YS7 1000 aa30.46■■■□□ 2.47
USP42-205ENST00000465073 SIPA1L3O60292 1781 aaPredicted RBP30.46■■■□□ 2.47
USP42-205ENST00000465073 U2AF1L5P0DN76 240 aaPredicted RBP30.45■■■□□ 2.47
USP42-205ENST00000465073 U2AF1Q01081 240 aaKnown RBP eCLIP30.45■■■□□ 2.47
USP42-205ENST00000465073 TBC1D9BQ66K14 1250 aa30.45■■■□□ 2.47
USP42-205ENST00000465073 NPM2Q86SE8 214 aaKnown RBP30.45■■■□□ 2.47
USP42-205ENST00000465073 TBC1D2BQ9UPU7 963 aa30.45■■■□□ 2.47
USP42-205ENST00000465073 ZNF330Q9Y3S2 320 aaPredicted RBP30.45■■■□□ 2.47
USP42-205ENST00000465073 A1BGP04217 495 aa30.44■■■□□ 2.46
USP42-205ENST00000465073 C16orf71Q8IYS4 520 aaPredicted RBP30.44■■■□□ 2.46
USP42-205ENST00000465073 RBM46Q8TBY0 533 aaKnown RBP30.44■■■□□ 2.46
USP42-205ENST00000465073 KCNQ3O43525 872 aa30.43■■■□□ 2.46
USP42-205ENST00000465073 PDZRN3Q9UPQ7 1066 aa30.43■■■□□ 2.46
USP42-205ENST00000465073 CARMIL3Q8ND23 1372 aa30.42■■■□□ 2.46
USP42-205ENST00000465073 RTF1Q92541 710 aaKnown RBP30.42■■■□□ 2.46
USP42-205ENST00000465073 ZC3H4Q9UPT8 1303 aaKnown RBP30.41■■■□□ 2.46
USP42-205ENST00000465073 LMNB1P20700 586 aa30.41■■■□□ 2.46
USP42-205ENST00000465073 BRIP1Q9BX63 1249 aa30.41■■■□□ 2.46
USP42-205ENST00000465073 RASSF7Q02833 373 aa30.4■■■□□ 2.46
USP42-205ENST00000465073 PDE6BP35913 854 aa30.39■■■□□ 2.46
USP42-205ENST00000465073 CAMTA2O94983 1202 aa30.38■■■□□ 2.45
USP42-205ENST00000465073 PRR5LQ6MZQ0 368 aa30.38■■■□□ 2.45
USP42-205ENST00000465073 SETDB2Q96T68 719 aa30.38■■■□□ 2.45
USP42-205ENST00000465073 RRAGCQ9HB90 399 aa30.38■■■□□ 2.45
USP42-205ENST00000465073 USP16Q9Y5T5 823 aa30.38■■■□□ 2.45
USP42-205ENST00000465073 DLEC1Q9Y238 1755 aa30.38■■■□□ 2.45
USP42-205ENST00000465073 SBF1O95248 1867 aa30.37■■■□□ 2.45
USP42-205ENST00000465073 HTATSF1O43719 755 aaKnown RBP30.37■■■□□ 2.45
USP42-205ENST00000465073 FSTL1Q12841 308 aa30.37■■■□□ 2.45
USP42-205ENST00000465073 MCM10Q7L590 875 aa30.37■■■□□ 2.45
USP42-205ENST00000465073 SCN7AQ01118 1682 aa30.36■■■□□ 2.45
USP42-205ENST00000465073 SNRPA1P09661 255 aaKnown RBP30.36■■■□□ 2.45
USP42-205ENST00000465073 DZIP3Q86Y13 1208 aaKnown RBP30.36■■■□□ 2.45
USP42-205ENST00000465073 ZNF622Q969S3 477 aaKnown RBP eCLIP30.35■■■□□ 2.45
USP42-205ENST00000465073 PRELPP51888 382 aa30.33■■■□□ 2.45
USP42-205ENST00000465073 CNBD1Q8NA66 436 aa30.33■■■□□ 2.45
USP42-205ENST00000465073 NPHP1O15259 732 aa30.32■■■□□ 2.44
USP42-205ENST00000465073 DNAJC5GQ8N7S2 189 aa30.32■■■□□ 2.44
USP42-205ENST00000465073 NFKBIEO00221 500 aa30.31■■■□□ 2.44
USP42-205ENST00000465073 CCDC24Q8N4L8 307 aa30.31■■■□□ 2.44
USP42-205ENST00000465073 PRAMEF22A3QJZ6 481 aa30.31■■■□□ 2.44
USP42-205ENST00000465073 GLTPD2A6NH11 291 aa30.31■■■□□ 2.44
USP42-205ENST00000465073 DCTN1Q14203 1278 aa30.31■■■□□ 2.44
USP42-205ENST00000465073 CLEC4GQ6UXB4 293 aa30.31■■■□□ 2.44
USP42-205ENST00000465073 ST5P78524 1137 aa30.3■■■□□ 2.44
USP42-205ENST00000465073 IFFO2Q5TF58 517 aa30.3■■■□□ 2.44
USP42-205ENST00000465073 PIP4K2AP48426 406 aaPredicted RBP30.29■■■□□ 2.44
USP42-205ENST00000465073 ANKRD31Q8N7Z5 1873 aa30.28■■■□□ 2.44
USP42-205ENST00000465073 TNRC6CQ9HCJ0 1690 aaKnown RBP30.28■■■□□ 2.44
USP42-205ENST00000465073 C21orf2O43822 256 aa30.28■■■□□ 2.44
USP42-205ENST00000465073 TAF7Q15545 349 aaPredicted RBP30.28■■■□□ 2.44
USP42-205ENST00000465073 ZNF652Q9Y2D9 606 aa30.28■■■□□ 2.44
USP42-205ENST00000465073 STYK1Q6J9G0 422 aa30.27■■■□□ 2.44
USP42-205ENST00000465073 CNKSR1Q969H4 720 aa30.27■■■□□ 2.44
USP42-205ENST00000465073 NEFMP07197 916 aa30.26■■■□□ 2.44
USP42-205ENST00000465073 VEGFAP15692 232 aaPredicted RBP30.26■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms