RNA–Protein interactions for RNA: ENST00000465027.1

COPS6-205, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 1 (best)

Gene COPS6, Length 1,171 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-205ENST00000465027 NFIXQ14938 502 aa22.64■■□□□ 1.21
COPS6-205ENST00000465027 SOS1Q07889 1333 aaPredicted RBP22.63■■□□□ 1.21
COPS6-205ENST00000465027 ZPR1O75312 459 aa22.63■■□□□ 1.21
COPS6-205ENST00000465027 GLTPD2A6NH11 291 aa22.62■■□□□ 1.21
COPS6-205ENST00000465027 VEGFAP15692 232 aaPredicted RBP22.62■■□□□ 1.21
COPS6-205ENST00000465027 LMNB1P20700 586 aa22.62■■□□□ 1.21
COPS6-205ENST00000465027 SULT6B1Q6IMI4 303 aa22.61■■□□□ 1.21
COPS6-205ENST00000465027 TIAM2Q8IVF5 1701 aa22.61■■□□□ 1.21
COPS6-205ENST00000465027 BCL2L12Q9HB09 334 aa22.61■■□□□ 1.21
COPS6-205ENST00000465027 CARMIL3Q8ND23 1372 aa22.61■■□□□ 1.21
COPS6-205ENST00000465027 POTECB2RU33 542 aa22.6■■□□□ 1.21
COPS6-205ENST00000465027 NFKBIEO00221 500 aa22.6■■□□□ 1.21
COPS6-205ENST00000465027 SLC39A6Q13433 755 aa22.6■■□□□ 1.21
COPS6-205ENST00000465027 CCDC88AQ3V6T2 1871 aa22.6■■□□□ 1.21
COPS6-205ENST00000465027 ZC3H4Q9UPT8 1303 aaKnown RBP22.59■■□□□ 1.21
COPS6-205ENST00000465027 SCN11AQ9UI33 1791 aa22.59■■□□□ 1.21
COPS6-205ENST00000465027 LGR6Q9HBX8 967 aa22.59■■□□□ 1.21
COPS6-205ENST00000465027 NRXN2Q9P2S2 1712 aa22.59■■□□□ 1.21
COPS6-205ENST00000465027 DLEC1Q9Y238 1755 aa22.58■■□□□ 1.21
COPS6-205ENST00000465027 SERPINB2P05120 415 aa22.58■■□□□ 1.21
COPS6-205ENST00000465027 CYP19A1P11511 503 aaPredicted RBP22.58■■□□□ 1.21
COPS6-205ENST00000465027 C2CD5Q86YS7 1000 aa22.58■■□□□ 1.21
COPS6-205ENST00000465027 NARFQ9UHQ1 456 aa22.58■■□□□ 1.21
COPS6-205ENST00000465027 ZBTB1Q9Y2K1 713 aa22.58■■□□□ 1.21
COPS6-205ENST00000465027 ZEB1P37275 1124 aaPredicted RBP22.57■■□□□ 1.2
COPS6-205ENST00000465027 TTLL6Q8N841 843 aa22.57■■□□□ 1.2
COPS6-205ENST00000465027 COL15A1P39059 1388 aa22.57■■□□□ 1.2
COPS6-205ENST00000465027 ZNF219Q9P2Y4 722 aaPredicted RBP22.56■■□□□ 1.2
COPS6-205ENST00000465027 BICDL1Q6ZP65 573 aa22.55■■□□□ 1.2
COPS6-205ENST00000465027 PANK3Q9H999 370 aa22.55■■□□□ 1.2
COPS6-205ENST00000465027 SLC52A2Q9HAB3 445 aa22.55■■□□□ 1.2
COPS6-205ENST00000465027 CCDC24Q8N4L8 307 aa22.54■■□□□ 1.2
COPS6-205ENST00000465027 MKRN1Q9UHC7 482 aaKnown RBP22.53■■□□□ 1.2
COPS6-205ENST00000465027 POTEIP0CG38 1075 aa22.52■■□□□ 1.2
COPS6-205ENST00000465027 POTEJP0CG39 1038 aa22.52■■□□□ 1.2
COPS6-205ENST00000465027 IL13P35225 146 aa22.52■■□□□ 1.2
COPS6-205ENST00000465027 MORC1Q86VD1 984 aa22.52■■□□□ 1.2
COPS6-205ENST00000465027 H0YIN7 160 aa22.51■■□□□ 1.19
COPS6-205ENST00000465027 CANXP27824 592 aaKnown RBP22.51■■□□□ 1.19
COPS6-205ENST00000465027 AKAP4Q5JQC9 854 aa22.51■■□□□ 1.19
COPS6-205ENST00000465027 RNMTO43148 476 aaKnown RBP22.5■■□□□ 1.19
COPS6-205ENST00000465027 ZNF622Q969S3 477 aaKnown RBP eCLIP22.5■■□□□ 1.197e-12■□□□□ 9.4
COPS6-205ENST00000465027 ANKRD31Q8N7Z5 1873 aa22.49■■□□□ 1.19
COPS6-205ENST00000465027 MRC1P22897 1456 aa22.49■■□□□ 1.19
COPS6-205ENST00000465027 C21orf2O43822 256 aa22.49■■□□□ 1.19
COPS6-205ENST00000465027 ERFEQ4G0M1 354 aa22.48■■□□□ 1.19
COPS6-205ENST00000465027 TIMELESSQ9UNS1 1208 aa22.48■■□□□ 1.19
COPS6-205ENST00000465027 COL11A2P13942 1736 aaPredicted RBP22.48■■□□□ 1.19
COPS6-205ENST00000465027 HMOX1P09601 288 aa22.47■■□□□ 1.19
COPS6-205ENST00000465027 TBC1D9BQ66K14 1250 aa22.47■■□□□ 1.19
COPS6-205ENST00000465027 DPY19L2Q6NUT2 758 aa22.47■■□□□ 1.19
COPS6-205ENST00000465027 VIRMAQ69YN4 1812 aaKnown RBP22.46■■□□□ 1.19
COPS6-205ENST00000465027 FOXN1O15353 648 aa22.45■■□□□ 1.18
COPS6-205ENST00000465027 DDNO94850 711 aaPredicted RBP22.45■■□□□ 1.18
COPS6-205ENST00000465027 CHADLQ6NUI6 762 aa22.45■■□□□ 1.18
COPS6-205ENST00000465027 FER1L6Q2WGJ9 1857 aa22.44■■□□□ 1.18
COPS6-205ENST00000465027 CREBZFQ9NS37 354 aa22.44■■□□□ 1.18
COPS6-205ENST00000465027 DICER1Q9UPY3 1922 aaKnown RBP22.43■■□□□ 1.18
COPS6-205ENST00000465027 EIF5P55010 431 aaKnown RBP22.43■■□□□ 1.18
COPS6-205ENST00000465027 MTHFSDQ2M296 383 aaKnown RBP22.43■■□□□ 1.18
COPS6-205ENST00000465027 PRR5LQ6MZQ0 368 aa22.43■■□□□ 1.18
COPS6-205ENST00000465027 TBC1D2BQ9UPU7 963 aa22.42■■□□□ 1.18
COPS6-205ENST00000465027 ZNF330Q9Y3S2 320 aaPredicted RBP22.42■■□□□ 1.18
COPS6-205ENST00000465027 UBR2Q8IWV8 1755 aa22.41■■□□□ 1.18
COPS6-205ENST00000465027 HSPA5P11021 654 aaKnown RBP22.41■■□□□ 1.18
COPS6-205ENST00000465027 VSIG10Q8N0Z9 540 aa22.4■■□□□ 1.18
COPS6-205ENST00000465027 BRIP1Q9BX63 1249 aa22.4■■□□□ 1.18
COPS6-205ENST00000465027 TAOK3Q9H2K8 898 aa22.4■■□□□ 1.18
COPS6-205ENST00000465027 SLX4Q8IY92 1834 aa22.4■■□□□ 1.18
COPS6-205ENST00000465027 SCN7AQ01118 1682 aa22.39■■□□□ 1.18
COPS6-205ENST00000465027 CACNA1SQ13698 1873 aa22.39■■□□□ 1.18
COPS6-205ENST00000465027 PDE6BP35913 854 aa22.39■■□□□ 1.17
COPS6-205ENST00000465027 CNTNAP1P78357 1384 aa22.38■■□□□ 1.17
COPS6-205ENST00000465027 ZNF496Q96IT1 587 aaPredicted RBP22.38■■□□□ 1.17
COPS6-205ENST00000465027 PASKQ96RG2 1323 aa22.36■■□□□ 1.17
COPS6-205ENST00000465027 LTBP3Q9NS15 1303 aa22.36■■□□□ 1.17
COPS6-205ENST00000465027 A0A087WZG4 1122 aa22.36■■□□□ 1.17
COPS6-205ENST00000465027 STARD3NLO95772 234 aa22.36■■□□□ 1.17
COPS6-205ENST00000465027 PRPF40BQ6NWY9 871 aaKnown RBP22.36■■□□□ 1.17
COPS6-205ENST00000465027 VEGFBP49765 207 aa22.35■■□□□ 1.17
COPS6-205ENST00000465027 TTC5Q8N0Z6 440 aa22.35■■□□□ 1.17
COPS6-205ENST00000465027 KNSTRNQ9Y448 316 aa22.35■■□□□ 1.17
COPS6-205ENST00000465027 EIF4G2P78344 907 aaKnown RBP eCLIP22.34■■□□□ 1.17
COPS6-205ENST00000465027 A1BGP04217 495 aa22.33■■□□□ 1.17
COPS6-205ENST00000465027 SRGNP10124 158 aa22.33■■□□□ 1.17
COPS6-205ENST00000465027 CNBD1Q8NA66 436 aa22.33■■□□□ 1.17
COPS6-205ENST00000465027 TAF1DQ9H5J8 278 aaPredicted RBP22.33■■□□□ 1.17
COPS6-205ENST00000465027 HEG1Q9ULI3 1381 aa22.33■■□□□ 1.17
COPS6-205ENST00000465027 CAMTA2O94983 1202 aa22.32■■□□□ 1.16
COPS6-205ENST00000465027 AMER1Q5JTC6 1135 aaPredicted RBP22.32■■□□□ 1.16
COPS6-205ENST00000465027 STYK1Q6J9G0 422 aa22.32■■□□□ 1.16
COPS6-205ENST00000465027 LDHDQ86WU2 507 aa22.32■■□□□ 1.16
COPS6-205ENST00000465027 CNKSR1Q969H4 720 aa22.32■■□□□ 1.16
COPS6-205ENST00000465027 PRDM10Q9NQV6 1147 aa22.32■■□□□ 1.16
COPS6-205ENST00000465027 PDZRN3Q9UPQ7 1066 aa22.32■■□□□ 1.16
COPS6-205ENST00000465027 ZNF541Q9H0D2 1346 aa22.31■■□□□ 1.16
COPS6-205ENST00000465027 NPHP1O15259 732 aa22.31■■□□□ 1.16
COPS6-205ENST00000465027 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
COPS6-205ENST00000465027 EAPPQ56P03 285 aaPredicted RBP22.31■■□□□ 1.16
COPS6-205ENST00000465027 OLFM4Q6UX06 510 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms