RNA–Protein interactions for RNA: ENST00000464395.1

PITRM1-209, Transcript of pitrilysin metallopeptidase 1, humanhuman

TSL 1 (best)

Gene PITRM1, Length 3,240 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-209ENST00000464395 UBE2Q2Q8WVN8 375 aa13.47□□□□□ -0.25
PITRM1-209ENST00000464395 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
PITRM1-209ENST00000464395 PPP1R42Q7Z4L9 355 aa13.47□□□□□ -0.25
PITRM1-209ENST00000464395 PSME1Q06323 249 aa13.46□□□□□ -0.25
PITRM1-209ENST00000464395 ZGPATQ8N5A5 531 aaKnown RBP13.46□□□□□ -0.25
PITRM1-209ENST00000464395 SRCIN1Q9C0H9 1055 aa13.46□□□□□ -0.25
PITRM1-209ENST00000464395 KDM6AO15550 1401 aaPredicted RBP13.46□□□□□ -0.25
PITRM1-209ENST00000464395 GOLGA6L3A6NEY3 463 aa13.46□□□□□ -0.26
PITRM1-209ENST00000464395 UTYO14607 1347 aa13.46□□□□□ -0.26
PITRM1-209ENST00000464395 EPB41L2O43491 1005 aaKnown RBP13.45□□□□□ -0.26
PITRM1-209ENST00000464395 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
PITRM1-209ENST00000464395 CUL4AQ13619 759 aa13.45□□□□□ -0.26
PITRM1-209ENST00000464395 PDIA6Q15084 440 aa13.45□□□□□ -0.26
PITRM1-209ENST00000464395 GBP4Q96PP9 640 aa13.45□□□□□ -0.26
PITRM1-209ENST00000464395 GZF1Q9H116 711 aaPredicted RBP13.45□□□□□ -0.26
PITRM1-209ENST00000464395 RAB11FIP3O75154 756 aa13.45□□□□□ -0.26
PITRM1-209ENST00000464395 UBTFL1P0CB47 393 aaPredicted RBP13.45□□□□□ -0.26
PITRM1-209ENST00000464395 ISY1Q9ULR0 285 aaKnown RBP13.45□□□□□ -0.26
PITRM1-209ENST00000464395 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
PITRM1-209ENST00000464395 PROSER3Q2NL68 480 aa13.45□□□□□ -0.26
PITRM1-209ENST00000464395 AMOTQ4VCS5 1084 aa13.45□□□□□ -0.26
PITRM1-209ENST00000464395 DNAAF4Q8WXU2 420 aa13.45□□□□□ -0.26
PITRM1-209ENST00000464395 PI4KAP2A4QPH2 592 aa13.44□□□□□ -0.26
PITRM1-209ENST00000464395 ANAPC15P60006 121 aa13.44□□□□□ -0.26
PITRM1-209ENST00000464395 CASC1Q6TDU7 716 aa13.44□□□□□ -0.26
PITRM1-209ENST00000464395 MPRIPQ6WCQ1 1025 aa13.44□□□□□ -0.26
PITRM1-209ENST00000464395 PI4KAP1Q8N8J0 262 aa13.44□□□□□ -0.26
PITRM1-209ENST00000464395 RRAGDQ9NQL2 400 aaPredicted RBP13.44□□□□□ -0.26
PITRM1-209ENST00000464395 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.44□□□□□ -0.26
PITRM1-209ENST00000464395 PRAMEF22A3QJZ6 481 aa13.44□□□□□ -0.26
PITRM1-209ENST00000464395 KAZALD1Q96I82 304 aa13.44□□□□□ -0.26
PITRM1-209ENST00000464395 LMBRD1Q9NUN5 540 aa13.44□□□□□ -0.26
PITRM1-209ENST00000464395 ARFGEF2Q9Y6D5 1785 aa13.44□□□□□ -0.26
PITRM1-209ENST00000464395 BTBD11A6QL63 1104 aa13.43□□□□□ -0.26
PITRM1-209ENST00000464395 SKOR2Q2VWA4 1001 aaPredicted RBP13.43□□□□□ -0.26
PITRM1-209ENST00000464395 PLEKHO1Q53GL0 409 aaPredicted RBP13.43□□□□□ -0.26
PITRM1-209ENST00000464395 ZNF530Q6P9A1 599 aaPredicted RBP13.43□□□□□ -0.26
PITRM1-209ENST00000464395 RHPN1Q8TCX5 695 aa13.43□□□□□ -0.26
PITRM1-209ENST00000464395 ANKRD24Q8TF21 1146 aa13.43□□□□□ -0.26
PITRM1-209ENST00000464395 CWC22Q9HCG8 908 aaKnown RBP13.43□□□□□ -0.26
PITRM1-209ENST00000464395 UBR2Q8IWV8 1755 aa13.43□□□□□ -0.26
PITRM1-209ENST00000464395 MRE11P49959 708 aa13.43□□□□□ -0.26
PITRM1-209ENST00000464395 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
PITRM1-209ENST00000464395 GRPEL1Q9HAV7 217 aa13.43□□□□□ -0.26
PITRM1-209ENST00000464395 ANXA1P04083 346 aa13.42□□□□□ -0.26
PITRM1-209ENST00000464395 PTMSP20962 102 aa13.42□□□□□ -0.26
PITRM1-209ENST00000464395 KLHL40Q2TBA0 621 aa13.42□□□□□ -0.26
PITRM1-209ENST00000464395 LRP10Q7Z4F1 713 aa13.42□□□□□ -0.26
PITRM1-209ENST00000464395 ERBB3P21860 1342 aa13.42□□□□□ -0.26
PITRM1-209ENST00000464395 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
PITRM1-209ENST00000464395 PLEKHG2Q9H7P9 1386 aa13.42□□□□□ -0.26
PITRM1-209ENST00000464395 MEGF6O75095 1541 aa13.42□□□□□ -0.26
PITRM1-209ENST00000464395 PAPPAQ13219 1627 aa13.42□□□□□ -0.26
PITRM1-209ENST00000464395 AFDNP55196 1824 aaKnown RBP13.42□□□□□ -0.26
PITRM1-209ENST00000464395 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
PITRM1-209ENST00000464395 HSPA4P34932 840 aa13.41□□□□□ -0.26
PITRM1-209ENST00000464395 NUCB2P80303 420 aa13.41□□□□□ -0.26
PITRM1-209ENST00000464395 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
PITRM1-209ENST00000464395 TMX3Q96JJ7 454 aa13.41□□□□□ -0.26
PITRM1-209ENST00000464395 IL1RAPL2Q9NP60 686 aa13.41□□□□□ -0.26
PITRM1-209ENST00000464395 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.41□□□□□ -0.26
PITRM1-209ENST00000464395 NUP188Q5SRE5 1749 aa13.41□□□□□ -0.26
PITRM1-209ENST00000464395 XPCQ01831 940 aaPredicted RBP13.41□□□□□ -0.26
PITRM1-209ENST00000464395 NUTM1Q86Y26 1132 aa13.41□□□□□ -0.26
PITRM1-209ENST00000464395 ST18O60284 1047 aa13.4□□□□□ -0.26
PITRM1-209ENST00000464395 LSG1Q9H089 658 aaKnown RBP13.4□□□□□ -0.26
PITRM1-209ENST00000464395 DBF4Q9UBU7 674 aaPredicted RBP13.4□□□□□ -0.26
PITRM1-209ENST00000464395 DCCP43146 1447 aa13.4□□□□□ -0.26
PITRM1-209ENST00000464395 TCHHQ07283 1943 aa13.4□□□□□ -0.26
PITRM1-209ENST00000464395 ALDH1L1O75891 902 aa13.4□□□□□ -0.26
PITRM1-209ENST00000464395 SGSM2O43147 1006 aa13.39□□□□□ -0.27
PITRM1-209ENST00000464395 TJP1Q07157 1748 aa13.39□□□□□ -0.27
PITRM1-209ENST00000464395 SRGAP3O43295 1099 aa13.39□□□□□ -0.27
PITRM1-209ENST00000464395 KSR2Q6VAB6 950 aa13.39□□□□□ -0.27
PITRM1-209ENST00000464395 KRT28Q7Z3Y7 464 aa13.39□□□□□ -0.27
PITRM1-209ENST00000464395 KIF1BPQ96EK5 621 aa13.39□□□□□ -0.27
PITRM1-209ENST00000464395 SURF6O75683 361 aaKnown RBP13.39□□□□□ -0.27
PITRM1-209ENST00000464395 KCNB2Q92953 911 aa13.39□□□□□ -0.27
PITRM1-209ENST00000464395 TTC14Q96N46 770 aa13.39□□□□□ -0.27
PITRM1-209ENST00000464395 ZNF445P59923 1031 aa13.38□□□□□ -0.27
PITRM1-209ENST00000464395 GPT2Q8TD30 523 aa13.38□□□□□ -0.27
PITRM1-209ENST00000464395 RAD50Q92878 1312 aa13.38□□□□□ -0.27
PITRM1-209ENST00000464395 BRD1O95696 1058 aa13.38□□□□□ -0.27
PITRM1-209ENST00000464395 INTS4Q96HW7 963 aaKnown RBP13.38□□□□□ -0.27
PITRM1-209ENST00000464395 MAP3K2Q9Y2U5 619 aa13.38□□□□□ -0.27
PITRM1-209ENST00000464395 NEK4P51957 841 aa13.37□□□□□ -0.27
PITRM1-209ENST00000464395 TEFQ10587 303 aa13.37□□□□□ -0.27
PITRM1-209ENST00000464395 ABCA3Q99758 1704 aa13.37□□□□□ -0.27
PITRM1-209ENST00000464395 TTC41PQ6P2S7 1318 aa13.37□□□□□ -0.27
PITRM1-209ENST00000464395 HSP90AA1P07900 732 aaKnown RBP13.37□□□□□ -0.27
PITRM1-209ENST00000464395 RILPL2Q969X0 211 aa13.37□□□□□ -0.27
PITRM1-209ENST00000464395 CHAMP1Q96JM3 812 aa13.37□□□□□ -0.27
PITRM1-209ENST00000464395 IGKV5-2P06315 115 aa13.37□□□□□ -0.27
PITRM1-209ENST00000464395 TRHP20396 242 aaPredicted RBP13.37□□□□□ -0.27
PITRM1-209ENST00000464395 MCM2P49736 904 aa13.37□□□□□ -0.27
PITRM1-209ENST00000464395 SNRKQ9NRH2 765 aa13.37□□□□□ -0.27
PITRM1-209ENST00000464395 CHMP4AQ9BY43 222 aa13.36□□□□□ -0.27
PITRM1-209ENST00000464395 RPAP1Q9BWH6 1393 aaPredicted RBP13.36□□□□□ -0.27
PITRM1-209ENST00000464395 CWF19L2Q2TBE0 894 aaKnown RBP13.35□□□□□ -0.27
PITRM1-209ENST00000464395 C19orf44Q9H6X5 657 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms