RNA–Protein interactions for RNA: ENST00000464239.5

SH2D3C-208, Transcript of SH2 domain containing 3C, humanhuman

TSL 5

Gene SH2D3C, Length 888 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-208ENST00000464239 ZPR1O75312 459 aa17.3■□□□□ 0.36
SH2D3C-208ENST00000464239 NFIXQ14938 502 aa17.3■□□□□ 0.36
SH2D3C-208ENST00000464239 VSIG10Q8N0Z9 540 aa17.3■□□□□ 0.36
SH2D3C-208ENST00000464239 RSPH6AQ9H0K4 717 aa17.3■□□□□ 0.36
SH2D3C-208ENST00000464239 NARFQ9UHQ1 456 aa17.3■□□□□ 0.36
SH2D3C-208ENST00000464239 COL15A1P39059 1388 aa17.29■□□□□ 0.36
SH2D3C-208ENST00000464239 KCNQ3O43525 872 aa17.29■□□□□ 0.36
SH2D3C-208ENST00000464239 CANXP27824 592 aaKnown RBP17.29■□□□□ 0.36
SH2D3C-208ENST00000464239 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
SH2D3C-208ENST00000464239 KIF3CO14782 793 aa17.28■□□□□ 0.36
SH2D3C-208ENST00000464239 ZNF790Q6PG37 636 aa17.28■□□□□ 0.36
SH2D3C-208ENST00000464239 GAS2L2Q8NHY3 880 aa17.28■□□□□ 0.36
SH2D3C-208ENST00000464239 PIM2Q9P1W9 311 aa17.28■□□□□ 0.36
SH2D3C-208ENST00000464239 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
SH2D3C-208ENST00000464239 PPP2R1AP30153 589 aa17.27■□□□□ 0.36
SH2D3C-208ENST00000464239 EIF5P55010 431 aaKnown RBP17.27■□□□□ 0.36
SH2D3C-208ENST00000464239 CEMIPQ8WUJ3 1361 aa17.27■□□□□ 0.35
SH2D3C-208ENST00000464239 BRCA1P38398 1863 aaKnown RBP17.27■□□□□ 0.35
SH2D3C-208ENST00000464239 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
SH2D3C-208ENST00000464239 TEFQ10587 303 aa17.26■□□□□ 0.35
SH2D3C-208ENST00000464239 DALRD3Q5D0E6 543 aaKnown RBP17.26■□□□□ 0.35
SH2D3C-208ENST00000464239 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
SH2D3C-208ENST00000464239 HEG1Q9ULI3 1381 aa17.26■□□□□ 0.35
SH2D3C-208ENST00000464239 STARD3NLO95772 234 aa17.24■□□□□ 0.35
SH2D3C-208ENST00000464239 SERPINB2P05120 415 aa17.24■□□□□ 0.35
SH2D3C-208ENST00000464239 C9orf131Q5VYM1 1079 aa17.24■□□□□ 0.35
SH2D3C-208ENST00000464239 CARMIL3Q8ND23 1372 aa17.24■□□□□ 0.35
SH2D3C-208ENST00000464239 A1BGP04217 495 aa17.23■□□□□ 0.35
SH2D3C-208ENST00000464239 BICDL1Q6ZP65 573 aa17.23■□□□□ 0.35
SH2D3C-208ENST00000464239 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
SH2D3C-208ENST00000464239 PRAMEF22A3QJZ6 481 aa17.22■□□□□ 0.35
SH2D3C-208ENST00000464239 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
SH2D3C-208ENST00000464239 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.35
SH2D3C-208ENST00000464239 TBC1D9BQ66K14 1250 aa17.22■□□□□ 0.35
SH2D3C-208ENST00000464239 NMRK2Q9NPI5 230 aa17.22■□□□□ 0.35
SH2D3C-208ENST00000464239 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
SH2D3C-208ENST00000464239 SIPA1L3O60292 1781 aaPredicted RBP17.22■□□□□ 0.35
SH2D3C-208ENST00000464239 BTBD11A6QL63 1104 aa17.21■□□□□ 0.35
SH2D3C-208ENST00000464239 PIP4K2AP48426 406 aaPredicted RBP17.21■□□□□ 0.35
SH2D3C-208ENST00000464239 PRELPP51888 382 aa17.21■□□□□ 0.35
SH2D3C-208ENST00000464239 DCTN1Q14203 1278 aa17.21■□□□□ 0.35
SH2D3C-208ENST00000464239 MCM10Q7L590 875 aa17.21■□□□□ 0.35
SH2D3C-208ENST00000464239 FMNL2Q96PY5 1086 aa17.21■□□□□ 0.35
SH2D3C-208ENST00000464239 AFDNP55196 1824 aaKnown RBP17.2■□□□□ 0.34
SH2D3C-208ENST00000464239 HSPA6P17066 643 aa17.2■□□□□ 0.34
SH2D3C-208ENST00000464239 CCDC24Q8N4L8 307 aa17.2■□□□□ 0.34
SH2D3C-208ENST00000464239 NUDCQ9Y266 331 aa17.2■□□□□ 0.34
SH2D3C-208ENST00000464239 ZNF330Q9Y3S2 320 aaPredicted RBP17.2■□□□□ 0.34
SH2D3C-208ENST00000464239 USP16Q9Y5T5 823 aa17.2■□□□□ 0.34
SH2D3C-208ENST00000464239 NRXN2Q9P2S2 1712 aa17.2■□□□□ 0.34
SH2D3C-208ENST00000464239 TEX13AQ9BXU3 409 aaPredicted RBP17.19■□□□□ 0.34
SH2D3C-208ENST00000464239 ARFGEF1Q9Y6D6 1849 aa17.19■□□□□ 0.34
SH2D3C-208ENST00000464239 A0A087WZG4 1122 aa17.18■□□□□ 0.34
SH2D3C-208ENST00000464239 CAMTA2O94983 1202 aa17.18■□□□□ 0.34
SH2D3C-208ENST00000464239 IL6STP40189 918 aaPredicted RBP17.18■□□□□ 0.34
SH2D3C-208ENST00000464239 RASSF7Q02833 373 aa17.18■□□□□ 0.34
SH2D3C-208ENST00000464239 RNF181Q9P0P0 153 aa17.18■□□□□ 0.34
SH2D3C-208ENST00000464239 C2CD5Q86YS7 1000 aa17.17■□□□□ 0.34
SH2D3C-208ENST00000464239 PRR5LQ6MZQ0 368 aa17.15■□□□□ 0.34
SH2D3C-208ENST00000464239 TTLL6Q8N841 843 aa17.15■□□□□ 0.34
SH2D3C-208ENST00000464239 MIS18AQ9NYP9 233 aa17.15■□□□□ 0.34
SH2D3C-208ENST00000464239 NBPF26B4DH59 902 aa17.14■□□□□ 0.33
SH2D3C-208ENST00000464239 TOMM70O94826 608 aa17.14■□□□□ 0.33
SH2D3C-208ENST00000464239 NBPF10Q6P3W6 841 aaKnown RBP17.14■□□□□ 0.33
SH2D3C-208ENST00000464239 NBPF15Q8N660 670 aa17.14■□□□□ 0.33
SH2D3C-208ENST00000464239 H0YIN7 160 aa17.13■□□□□ 0.33
SH2D3C-208ENST00000464239 NFKBIEO00221 500 aa17.13■□□□□ 0.33
SH2D3C-208ENST00000464239 DZIP3Q86Y13 1208 aaKnown RBP17.13■□□□□ 0.33
SH2D3C-208ENST00000464239 RTF1Q92541 710 aaKnown RBP17.13■□□□□ 0.33
SH2D3C-208ENST00000464239 SCN7AQ01118 1682 aa17.13■□□□□ 0.33
SH2D3C-208ENST00000464239 SNRPA1P09661 255 aaKnown RBP17.12■□□□□ 0.33
SH2D3C-208ENST00000464239 PLEKHF1Q96S99 279 aa17.12■□□□□ 0.33
SH2D3C-208ENST00000464239 BRIP1Q9BX63 1249 aa17.12■□□□□ 0.33
SH2D3C-208ENST00000464239 HTATSF1O43719 755 aaKnown RBP17.11■□□□□ 0.33
SH2D3C-208ENST00000464239 RRAGCQ9HB90 399 aa17.11■□□□□ 0.33
SH2D3C-208ENST00000464239 SBF1O95248 1867 aa17.11■□□□□ 0.33
SH2D3C-208ENST00000464239 ANKRD31Q8N7Z5 1873 aa17.11■□□□□ 0.33
SH2D3C-208ENST00000464239 LMNB1P20700 586 aa17.1■□□□□ 0.33
SH2D3C-208ENST00000464239 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
SH2D3C-208ENST00000464239 ZNF622Q969S3 477 aaKnown RBP eCLIP17.1■□□□□ 0.33
SH2D3C-208ENST00000464239 SETDB2Q96T68 719 aa17.1■□□□□ 0.33
SH2D3C-208ENST00000464239 THUMPD2Q9BTF0 503 aaKnown RBP17.1■□□□□ 0.33
SH2D3C-208ENST00000464239 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
SH2D3C-208ENST00000464239 DLEC1Q9Y238 1755 aa17.1■□□□□ 0.33
SH2D3C-208ENST00000464239 C21orf2O43822 256 aa17.09■□□□□ 0.33
SH2D3C-208ENST00000464239 CNBD1Q8NA66 436 aa17.09■□□□□ 0.33
SH2D3C-208ENST00000464239 PDE6BP35913 854 aa17.08■□□□□ 0.32
SH2D3C-208ENST00000464239 DNAJC5GQ8N7S2 189 aa17.08■□□□□ 0.32
SH2D3C-208ENST00000464239 RBM46Q8TBY0 533 aaKnown RBP17.08■□□□□ 0.32
SH2D3C-208ENST00000464239 COL11A2P13942 1736 aaPredicted RBP17.07■□□□□ 0.32
SH2D3C-208ENST00000464239 KDM2BQ8NHM5 1336 aa17.07■□□□□ 0.32
SH2D3C-208ENST00000464239 HTRA3P83110 453 aa17.07■□□□□ 0.32
SH2D3C-208ENST00000464239 HLFQ16534 295 aa17.07■□□□□ 0.32
SH2D3C-208ENST00000464239 SRGNP10124 158 aa17.06■□□□□ 0.32
SH2D3C-208ENST00000464239 APLP1P51693 650 aa17.06■□□□□ 0.32
SH2D3C-208ENST00000464239 CLEC4GQ6UXB4 293 aa17.06■□□□□ 0.32
SH2D3C-208ENST00000464239 NPM2Q86SE8 214 aaKnown RBP17.06■□□□□ 0.32
SH2D3C-208ENST00000464239 BCORQ6W2J9 1755 aa17.05■□□□□ 0.32
SH2D3C-208ENST00000464239 NFE2L2Q16236 605 aa17.05■□□□□ 0.32
SH2D3C-208ENST00000464239 NBPF5PQ86XG9 351 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms