RNA–Protein interactions for RNA: ENST00000464119.1

SREBF2-206, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-206ENST00000464119 C4BP0C0L5 1744 aa15.35■□□□□ 0.05
SREBF2-206ENST00000464119 KCNQ3O43525 872 aa15.35■□□□□ 0.05
SREBF2-206ENST00000464119 HMGB2P26583 209 aaKnown RBP15.35■□□□□ 0.05
SREBF2-206ENST00000464119 ATP6V1AP38606 617 aa15.35■□□□□ 0.05
SREBF2-206ENST00000464119 GNAI1P63096 354 aa15.35■□□□□ 0.05
SREBF2-206ENST00000464119 NBPF14Q5TI25 921 aa15.35■□□□□ 0.05
SREBF2-206ENST00000464119 TTC5Q8N0Z6 440 aa15.35■□□□□ 0.05
SREBF2-206ENST00000464119 AKT1S1Q96B36 256 aa15.35■□□□□ 0.05
SREBF2-206ENST00000464119 ANO8Q9HCE9 1232 aaPredicted RBP15.35■□□□□ 0.05
SREBF2-206ENST00000464119 PTCD1O75127 700 aaKnown RBP15.34■□□□□ 0.05
SREBF2-206ENST00000464119 ZNF853P0CG23 659 aa15.34■□□□□ 0.05
SREBF2-206ENST00000464119 CANXP27824 592 aaKnown RBP15.34■□□□□ 0.05
SREBF2-206ENST00000464119 ZNF827Q17R98 1081 aa15.34■□□□□ 0.05
SREBF2-206ENST00000464119 LINC00116Q8NCU8 138 aa15.34■□□□□ 0.05
SREBF2-206ENST00000464119 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
SREBF2-206ENST00000464119 KIF16BQ96L93 1317 aa15.34■□□□□ 0.05
SREBF2-206ENST00000464119 QSER1Q2KHR3 1735 aa15.34■□□□□ 0.05
SREBF2-206ENST00000464119 CHL1O00533 1208 aa15.33■□□□□ 0.04
SREBF2-206ENST00000464119 EXOSC9Q06265 439 aaKnown RBP15.33■□□□□ 0.04
SREBF2-206ENST00000464119 SLC15A2Q16348 729 aa15.33■□□□□ 0.04
SREBF2-206ENST00000464119 ZKSCAN2Q63HK3 967 aa15.33■□□□□ 0.04
SREBF2-206ENST00000464119 ZNF496Q96IT1 587 aaPredicted RBP15.33■□□□□ 0.04
SREBF2-206ENST00000464119 FMNL2Q96PY5 1086 aa15.33■□□□□ 0.04
SREBF2-206ENST00000464119 MIS18AQ9NYP9 233 aa15.33■□□□□ 0.04
SREBF2-206ENST00000464119 HEG1Q9ULI3 1381 aa15.33■□□□□ 0.04
SREBF2-206ENST00000464119 CLUAP1Q96AJ1 413 aa15.32■□□□□ 0.04
SREBF2-206ENST00000464119 STK32BQ9NY57 414 aa15.32■□□□□ 0.04
SREBF2-206ENST00000464119 TUBGCP6Q96RT7 1819 aa15.31■□□□□ 0.04
SREBF2-206ENST00000464119 IPO8O15397 1037 aaKnown RBP15.31■□□□□ 0.04
SREBF2-206ENST00000464119 CFAP44Q96MT7 982 aa15.31■□□□□ 0.04
SREBF2-206ENST00000464119 EIF4A1P60842 406 aaKnown RBP15.3■□□□□ 0.04
SREBF2-206ENST00000464119 RC3H1Q5TC82 1133 aaKnown RBP15.3■□□□□ 0.04
SREBF2-206ENST00000464119 TSR2Q969E8 191 aaKnown RBP15.3■□□□□ 0.04
SREBF2-206ENST00000464119 CNTNAP4Q9C0A0 1308 aa15.3■□□□□ 0.04
SREBF2-206ENST00000464119 TSPYL4Q9UJ04 414 aa15.3■□□□□ 0.04
SREBF2-206ENST00000464119 UBR3Q6ZT12 1888 aa15.29■□□□□ 0.04
SREBF2-206ENST00000464119 CASZ1Q86V15 1759 aa15.29■□□□□ 0.04
SREBF2-206ENST00000464119 CYP19A1P11511 503 aaPredicted RBP15.29■□□□□ 0.04
SREBF2-206ENST00000464119 R3HDM1Q15032 1099 aaKnown RBP15.29■□□□□ 0.04
SREBF2-206ENST00000464119 DNAJC10Q8IXB1 793 aa15.29■□□□□ 0.04
SREBF2-206ENST00000464119 ARHGAP45Q92619 1136 aa15.29■□□□□ 0.04
SREBF2-206ENST00000464119 SNRPA1P09661 255 aaKnown RBP15.28■□□□□ 0.04
SREBF2-206ENST00000464119 MVPQ14764 893 aaKnown RBP15.28■□□□□ 0.04
SREBF2-206ENST00000464119 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
SREBF2-206ENST00000464119 FRAT1Q92837 279 aaPredicted RBP15.28■□□□□ 0.04
SREBF2-206ENST00000464119 TEX13AQ9BXU3 409 aaPredicted RBP15.28■□□□□ 0.04
SREBF2-206ENST00000464119 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
SREBF2-206ENST00000464119 LAMB4A4D0S4 1761 aa15.28■□□□□ 0.04
SREBF2-206ENST00000464119 MYH14Q7Z406 1995 aaKnown RBP15.27■□□□□ 0.04
SREBF2-206ENST00000464119 PSDA5PKW4 1024 aaPredicted RBP15.27■□□□□ 0.04
SREBF2-206ENST00000464119 GIGYF1O75420 1035 aaPredicted RBP15.27■□□□□ 0.04
SREBF2-206ENST00000464119 CRKLP46109 303 aaKnown RBP15.27■□□□□ 0.04
SREBF2-206ENST00000464119 INTS5Q6P9B9 1019 aaKnown RBP15.27■□□□□ 0.04
SREBF2-206ENST00000464119 ATF7IPQ6VMQ6 1270 aa15.27■□□□□ 0.04
SREBF2-206ENST00000464119 AMIGO3Q86WK7 504 aa15.27■□□□□ 0.04
SREBF2-206ENST00000464119 PANK1Q8TE04 598 aa15.27■□□□□ 0.04
SREBF2-206ENST00000464119 SSH1Q8WYL5 1049 aa15.27■□□□□ 0.04
SREBF2-206ENST00000464119 CHMP4BQ9H444 224 aaKnown RBP15.27■□□□□ 0.04
SREBF2-206ENST00000464119 MBIPQ9NS73 344 aa15.27■□□□□ 0.04
SREBF2-206ENST00000464119 TFCP2L1Q9NZI6 479 aa15.27■□□□□ 0.04
SREBF2-206ENST00000464119 COG6Q9Y2V7 657 aa15.27■□□□□ 0.04
SREBF2-206ENST00000464119 PNPLA7Q6ZV29 1317 aa15.26■□□□□ 0.03
SREBF2-206ENST00000464119 CACNA1FO60840 1977 aa15.26■□□□□ 0.03
SREBF2-206ENST00000464119 PRAMEF22A3QJZ6 481 aa15.26■□□□□ 0.03
SREBF2-206ENST00000464119 AK7Q96M32 723 aa15.26■□□□□ 0.03
SREBF2-206ENST00000464119 DDX19BQ9UMR2 479 aa15.26■□□□□ 0.03
SREBF2-206ENST00000464119 LAS1LQ9Y4W2 734 aaKnown RBP15.26■□□□□ 0.03
SREBF2-206ENST00000464119 VAMP4O75379 141 aa15.25■□□□□ 0.03
SREBF2-206ENST00000464119 STARD3NLO95772 234 aa15.25■□□□□ 0.03
SREBF2-206ENST00000464119 CCDC87Q9NVE4 849 aa15.25■□□□□ 0.03
SREBF2-206ENST00000464119 USP16Q9Y5T5 823 aa15.25■□□□□ 0.03
SREBF2-206ENST00000464119 GNPATO15228 680 aa15.24■□□□□ 0.03
SREBF2-206ENST00000464119 RPS6KA4O75676 772 aa15.24■□□□□ 0.03
SREBF2-206ENST00000464119 RLBP1P12271 317 aa15.24■□□□□ 0.03
SREBF2-206ENST00000464119 TRIM27P14373 513 aa15.24■□□□□ 0.03
SREBF2-206ENST00000464119 SSFA2P28290 1259 aa15.24■□□□□ 0.03
SREBF2-206ENST00000464119 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
SREBF2-206ENST00000464119 BACH2Q9BYV9 841 aa15.24■□□□□ 0.03
SREBF2-206ENST00000464119 PDGFDQ9GZP0 370 aaPredicted RBP15.24■□□□□ 0.03
SREBF2-206ENST00000464119 COL23A1Q86Y22 540 aaPredicted RBP15.23■□□□□ 0.03
SREBF2-206ENST00000464119 FLAD1Q8NFF5 587 aa15.23■□□□□ 0.03
SREBF2-206ENST00000464119 SOS1Q07889 1333 aaPredicted RBP15.22■□□□□ 0.03
SREBF2-206ENST00000464119 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.22■□□□□ 0.03
SREBF2-206ENST00000464119 A1BGP04217 495 aa15.22■□□□□ 0.03
SREBF2-206ENST00000464119 HOXB7P09629 217 aa15.22■□□□□ 0.03
SREBF2-206ENST00000464119 ADRA2BP18089 450 aa15.22■□□□□ 0.03
SREBF2-206ENST00000464119 PDE4AP27815 886 aa15.22■□□□□ 0.03
SREBF2-206ENST00000464119 BCL2L13Q9BXK5 485 aa15.22■□□□□ 0.03
SREBF2-206ENST00000464119 ZBTB1Q9Y2K1 713 aa15.22■□□□□ 0.03
SREBF2-206ENST00000464119 RTCBQ9Y3I0 505 aaKnown RBP15.22■□□□□ 0.03
SREBF2-206ENST00000464119 C4AP0C0L4 1744 aa15.22■□□□□ 0.03
SREBF2-206ENST00000464119 COL24A1Q17RW2 1714 aa15.22■□□□□ 0.03
SREBF2-206ENST00000464119 KRT24Q2M2I5 525 aa15.21■□□□□ 0.03
SREBF2-206ENST00000464119 SMIM5Q71RC9 77 aa15.21■□□□□ 0.03
SREBF2-206ENST00000464119 RWDD1Q9H446 243 aaPredicted RBP15.21■□□□□ 0.03
SREBF2-206ENST00000464119 EIF5P55010 431 aaKnown RBP15.2■□□□□ 0.02
SREBF2-206ENST00000464119 TRAPPC3LQ5T215 181 aa15.2■□□□□ 0.02
SREBF2-206ENST00000464119 MRPL50Q8N5N7 158 aaKnown RBP15.2■□□□□ 0.02
SREBF2-206ENST00000464119 SLC16A10Q8TF71 515 aa15.2■□□□□ 0.02
SREBF2-206ENST00000464119 NOB1Q9ULX3 412 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms