RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 DDX21Q9NR30 783 aaKnown RBP eCLIP24.03■■□□□ 1.44
CCDC78-206ENST00000463539 HYPKQ9NX55 129 aa24.03■■□□□ 1.44
CCDC78-206ENST00000463539 BCL9O00512 1426 aa24.02■■□□□ 1.44
CCDC78-206ENST00000463539 PROSER3Q2NL68 480 aa24.02■■□□□ 1.44
CCDC78-206ENST00000463539 SYTL4Q96C24 671 aaPredicted RBP24.02■■□□□ 1.44
CCDC78-206ENST00000463539 UBR2Q8IWV8 1755 aa24.01■■□□□ 1.43
CCDC78-206ENST00000463539 CACNA1FO60840 1977 aa24.01■■□□□ 1.43
CCDC78-206ENST00000463539 PTCD1O75127 700 aaKnown RBP24.01■■□□□ 1.43
CCDC78-206ENST00000463539 A0A0G2JS52 829 aa24■■□□□ 1.43
CCDC78-206ENST00000463539 MYT1Q01538 1121 aa24■■□□□ 1.43
CCDC78-206ENST00000463539 USP16Q9Y5T5 823 aa24■■□□□ 1.43
CCDC78-206ENST00000463539 PXDNLA1KZ92 1463 aa24■■□□□ 1.43
CCDC78-206ENST00000463539 IGHDP01880 384 aa24■■□□□ 1.43
CCDC78-206ENST00000463539 PRIM1P49642 420 aaKnown RBP23.99■■□□□ 1.43
CCDC78-206ENST00000463539 PDIA6Q15084 440 aa23.99■■□□□ 1.43
CCDC78-206ENST00000463539 RWDD1Q9H446 243 aaPredicted RBP23.99■■□□□ 1.43
CCDC78-206ENST00000463539 ASAP1Q9ULH1 1129 aa23.99■■□□□ 1.43
CCDC78-206ENST00000463539 GJD4Q96KN9 370 aaPredicted RBP23.98■■□□□ 1.43
CCDC78-206ENST00000463539 ATG3Q9NT62 314 aa23.98■■□□□ 1.43
CCDC78-206ENST00000463539 TRPC5Q9UL62 973 aaPredicted RBP23.98■■□□□ 1.43
CCDC78-206ENST00000463539 ATRNO75882 1429 aa23.97■■□□□ 1.43
CCDC78-206ENST00000463539 DOT1LQ8TEK3 1739 aa23.97■■□□□ 1.43
CCDC78-206ENST00000463539 LAMB4A4D0S4 1761 aa23.96■■□□□ 1.43
CCDC78-206ENST00000463539 PI4KAP2A4QPH2 592 aa23.96■■□□□ 1.43
CCDC78-206ENST00000463539 MYL6BP14649 208 aa23.96■■□□□ 1.43
CCDC78-206ENST00000463539 PI4KAP1Q8N8J0 262 aa23.96■■□□□ 1.43
CCDC78-206ENST00000463539 ERBB4Q15303 1308 aa23.95■■□□□ 1.43
CCDC78-206ENST00000463539 ITGB4P16144 1822 aa23.95■■□□□ 1.42
CCDC78-206ENST00000463539 DDX58O95786 925 aaKnown RBP23.95■■□□□ 1.42
CCDC78-206ENST00000463539 VSIG10Q8N0Z9 540 aa23.95■■□□□ 1.42
CCDC78-206ENST00000463539 DNAAF4Q8WXU2 420 aa23.95■■□□□ 1.42
CCDC78-206ENST00000463539 C1orf115Q9H7X2 142 aa23.95■■□□□ 1.42
CCDC78-206ENST00000463539 THSD7AQ9UPZ6 1657 aa23.95■■□□□ 1.42
CCDC78-206ENST00000463539 ADCY9O60503 1353 aa23.94■■□□□ 1.42
CCDC78-206ENST00000463539 HDAC1Q13547 482 aaPredicted RBP23.94■■□□□ 1.42
CCDC78-206ENST00000463539 ACSBG1Q96GR2 724 aa23.94■■□□□ 1.42
CCDC78-206ENST00000463539 MEIS3Q99687 375 aa23.94■■□□□ 1.42
CCDC78-206ENST00000463539 KSR2Q6VAB6 950 aa23.93■■□□□ 1.42
CCDC78-206ENST00000463539 AIMP1Q12904 312 aaKnown RBP23.92■■□□□ 1.42
CCDC78-206ENST00000463539 RBM42Q9BTD8 480 aaKnown RBP23.92■■□□□ 1.42
CCDC78-206ENST00000463539 TEX13AQ9BXU3 409 aaPredicted RBP23.92■■□□□ 1.42
CCDC78-206ENST00000463539 SRCIN1Q9C0H9 1055 aa23.91■■□□□ 1.42
CCDC78-206ENST00000463539 MAP3K2Q9Y2U5 619 aa23.91■■□□□ 1.42
CCDC78-206ENST00000463539 ATP10DQ9P241 1426 aa23.91■■□□□ 1.42
CCDC78-206ENST00000463539 PIP4K2AP48426 406 aaPredicted RBP23.91■■□□□ 1.42
CCDC78-206ENST00000463539 LRP10Q7Z4F1 713 aa23.91■■□□□ 1.42
CCDC78-206ENST00000463539 XAGE3Q8WTP9 111 aa23.91■■□□□ 1.42
CCDC78-206ENST00000463539 COPS6Q7L5N1 327 aa23.89■■□□□ 1.42
CCDC78-206ENST00000463539 QTRT2Q9H974 415 aaKnown RBP23.89■■□□□ 1.42
CCDC78-206ENST00000463539 BEND3Q5T5X7 828 aa23.89■■□□□ 1.41
CCDC78-206ENST00000463539 N4BP2Q86UW6 1770 aaPredicted RBP23.88■■□□□ 1.41
CCDC78-206ENST00000463539 NBPF26B4DH59 902 aa23.88■■□□□ 1.41
CCDC78-206ENST00000463539 ONECUT3O60422 494 aaPredicted RBP23.88■■□□□ 1.41
CCDC78-206ENST00000463539 GNAI3P08754 354 aa23.88■■□□□ 1.41
CCDC78-206ENST00000463539 NBPF14Q5TI25 921 aa23.88■■□□□ 1.41
CCDC78-206ENST00000463539 NBPF10Q6P3W6 841 aaKnown RBP23.88■■□□□ 1.41
CCDC78-206ENST00000463539 DNAJC10Q8IXB1 793 aa23.88■■□□□ 1.41
CCDC78-206ENST00000463539 NBPF15Q8N660 670 aa23.88■■□□□ 1.41
CCDC78-206ENST00000463539 STARD3NLO95772 234 aa23.87■■□□□ 1.41
CCDC78-206ENST00000463539 A1BGP04217 495 aa23.87■■□□□ 1.41
CCDC78-206ENST00000463539 RIC3Q7Z5B4 369 aa23.87■■□□□ 1.41
CCDC78-206ENST00000463539 KCNQ2O43526 872 aa23.85■■□□□ 1.41
CCDC78-206ENST00000463539 GNAI2P04899 355 aa23.85■■□□□ 1.41
CCDC78-206ENST00000463539 SLC4A9Q96Q91 983 aa23.85■■□□□ 1.41
CCDC78-206ENST00000463539 ANKRD13DQ6ZTN6 518 aa23.84■■□□□ 1.41
CCDC78-206ENST00000463539 SKAP1Q86WV1 359 aa23.84■■□□□ 1.41
CCDC78-206ENST00000463539 SIRT2Q8IXJ6 389 aa23.84■■□□□ 1.41
CCDC78-206ENST00000463539 SEPT12Q8IYM1 358 aa23.84■■□□□ 1.41
CCDC78-206ENST00000463539 USP44Q9H0E7 712 aa23.84■■□□□ 1.41
CCDC78-206ENST00000463539 ALDH1L1O75891 902 aa23.84■■□□□ 1.41
CCDC78-206ENST00000463539 RPAP2Q8IXW5 612 aaPredicted RBP23.84■■□□□ 1.41
CCDC78-206ENST00000463539 CEP85Q6P2H3 762 aa23.83■■□□□ 1.41
CCDC78-206ENST00000463539 ANKRD44Q8N8A2 993 aa23.83■■□□□ 1.41
CCDC78-206ENST00000463539 LINS1Q8NG48 757 aa23.83■■□□□ 1.41
CCDC78-206ENST00000463539 SMARCC1Q92922 1105 aaPredicted RBP23.83■■□□□ 1.41
CCDC78-206ENST00000463539 UBTFL1P0CB47 393 aaPredicted RBP23.82■■□□□ 1.4
CCDC78-206ENST00000463539 NEXNQ0ZGT2 675 aa23.82■■□□□ 1.4
CCDC78-206ENST00000463539 SMC5Q8IY18 1101 aa23.82■■□□□ 1.4
CCDC78-206ENST00000463539 PALLDQ8WX93 1383 aa23.82■■□□□ 1.4
CCDC78-206ENST00000463539 KAT6BQ8WYB5 2073 aa23.82■■□□□ 1.4
CCDC78-206ENST00000463539 PLBD2Q8NHP8 589 aa23.81■■□□□ 1.4
CCDC78-206ENST00000463539 CYP19A1P11511 503 aaPredicted RBP23.8■■□□□ 1.4
CCDC78-206ENST00000463539 ZNF772Q68DY9 489 aaPredicted RBP23.8■■□□□ 1.4
CCDC78-206ENST00000463539 METTL22Q9BUU2 404 aaPredicted RBP23.8■■□□□ 1.4
CCDC78-206ENST00000463539 LOC102724428A0A0B4J2F2 783 aa23.8■■□□□ 1.4
CCDC78-206ENST00000463539 SIK1P57059 783 aa23.8■■□□□ 1.4
CCDC78-206ENST00000463539 CWF19L2Q2TBE0 894 aaKnown RBP23.8■■□□□ 1.4
CCDC78-206ENST00000463539 GCC1Q96CN9 775 aa23.8■■□□□ 1.4
CCDC78-206ENST00000463539 PDZRN3Q9UPQ7 1066 aa23.79■■□□□ 1.4
CCDC78-206ENST00000463539 FAM182BQ5T319 152 aa23.78■■□□□ 1.4
CCDC78-206ENST00000463539 MYD88Q99836 296 aa23.78■■□□□ 1.4
CCDC78-206ENST00000463539 LRRFIP2Q9Y608 721 aaKnown RBP23.78■■□□□ 1.4
CCDC78-206ENST00000463539 HMMRO75330 724 aa23.77■■□□□ 1.4
CCDC78-206ENST00000463539 ATP6V1AP38606 617 aa23.77■■□□□ 1.4
CCDC78-206ENST00000463539 RGS3P49796 1198 aa23.77■■□□□ 1.4
CCDC78-206ENST00000463539 TTLL7Q6ZT98 887 aa23.77■■□□□ 1.4
CCDC78-206ENST00000463539 FBXO41Q8TF61 875 aa23.77■■□□□ 1.4
CCDC78-206ENST00000463539 C9orf78Q9NZ63 289 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-206ENST00000463539 ZNF330Q9Y3S2 320 aaPredicted RBP23.77■■□□□ 1.4
CCDC78-206ENST00000463539 TJP1Q07157 1748 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms