RNA–Protein interactions for RNA: ENST00000463317.6

VAMP7-204, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 5

Gene VAMP7, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-204ENST00000463317 FAM208AQ9UK61 1670 aaKnown RBP8.5□□□□□ -1.05
VAMP7-204ENST00000463317 BRPF1P55201 1214 aaPredicted RBP8.5□□□□□ -1.05
VAMP7-204ENST00000463317 ITPK1Q13572 414 aa8.5□□□□□ -1.05
VAMP7-204ENST00000463317 ERFEQ4G0M1 354 aa8.5□□□□□ -1.05
VAMP7-204ENST00000463317 MPRIPQ6WCQ1 1025 aa8.5□□□□□ -1.05
VAMP7-204ENST00000463317 PAXIP1Q6ZW49 1069 aaPredicted RBP8.5□□□□□ -1.05
VAMP7-204ENST00000463317 DDX21Q9NR30 783 aaKnown RBP eCLIP8.5□□□□□ -1.05
VAMP7-204ENST00000463317 TRIOBPQ9H2D6 2365 aa8.5□□□□□ -1.05
VAMP7-204ENST00000463317 LTN1O94822 1766 aa8.5□□□□□ -1.05
VAMP7-204ENST00000463317 LOC102724428A0A0B4J2F2 783 aa8.49□□□□□ -1.05
VAMP7-204ENST00000463317 SIK1P57059 783 aa8.49□□□□□ -1.05
VAMP7-204ENST00000463317 SRPK2P78362 688 aaKnown RBP8.49□□□□□ -1.05
VAMP7-204ENST00000463317 EAPPQ56P03 285 aaPredicted RBP8.49□□□□□ -1.05
VAMP7-204ENST00000463317 TRAPPC3LQ5T215 181 aa8.49□□□□□ -1.05
VAMP7-204ENST00000463317 MAP1SQ66K74 1059 aaPredicted RBP8.49□□□□□ -1.05
VAMP7-204ENST00000463317 ARHGEF1Q92888 912 aaKnown RBP8.49□□□□□ -1.05
VAMP7-204ENST00000463317 CABP2Q9NPB3 220 aa8.49□□□□□ -1.05
VAMP7-204ENST00000463317 TTC21AQ8NDW8 1320 aa8.49□□□□□ -1.05
VAMP7-204ENST00000463317 ITGB4P16144 1822 aa8.48□□□□□ -1.05
VAMP7-204ENST00000463317 DDR1Q08345 913 aa8.48□□□□□ -1.05
VAMP7-204ENST00000463317 TLL2Q9Y6L7 1015 aa8.48□□□□□ -1.05
VAMP7-204ENST00000463317 DLEC1Q9Y238 1755 aa8.48□□□□□ -1.05
VAMP7-204ENST00000463317 HPS5Q9UPZ3 1129 aa8.47□□□□□ -1.05
VAMP7-204ENST00000463317 COLQQ9Y215 455 aaPredicted RBP8.47□□□□□ -1.05
VAMP7-204ENST00000463317 RTCBQ9Y3I0 505 aaKnown RBP8.47□□□□□ -1.05
VAMP7-204ENST00000463317 FMR1Q06787 632 aaKnown RBP eCLIP8.46□□□□□ -1.06
VAMP7-204ENST00000463317 CST9Q5W186 159 aa8.46□□□□□ -1.06
VAMP7-204ENST00000463317 CIAPIN1Q6FI81 312 aa8.46□□□□□ -1.06
VAMP7-204ENST00000463317 TTLL6Q8N841 843 aa8.46□□□□□ -1.06
VAMP7-204ENST00000463317 PIGBQ92521 554 aa8.46□□□□□ -1.06
VAMP7-204ENST00000463317 FER1L6Q2WGJ9 1857 aa8.46□□□□□ -1.06
VAMP7-204ENST00000463317 USP31Q70CQ4 1352 aa8.46□□□□□ -1.06
VAMP7-204ENST00000463317 EPHX2P34913 555 aa8.45□□□□□ -1.06
VAMP7-204ENST00000463317 PNMA8AQ86V59 439 aaPredicted RBP8.45□□□□□ -1.06
VAMP7-204ENST00000463317 HACL1Q9UJ83 578 aa8.45□□□□□ -1.06
VAMP7-204ENST00000463317 LTBP3Q9NS15 1303 aa8.45□□□□□ -1.06
VAMP7-204ENST00000463317 INSRP06213 1382 aa8.45□□□□□ -1.06
VAMP7-204ENST00000463317 TRPM7Q96QT4 1865 aa8.45□□□□□ -1.06
VAMP7-204ENST00000463317 POLRMTO00411 1230 aaKnown RBP8.44□□□□□ -1.06
VAMP7-204ENST00000463317 RFC4P35249 363 aa8.44□□□□□ -1.06
VAMP7-204ENST00000463317 ATP6V1AP38606 617 aa8.44□□□□□ -1.06
VAMP7-204ENST00000463317 CTU1Q7Z7A3 348 aaKnown RBP8.44□□□□□ -1.06
VAMP7-204ENST00000463317 MPNDQ8N594 471 aa8.44□□□□□ -1.06
VAMP7-204ENST00000463317 IP6K1Q92551 441 aa8.44□□□□□ -1.06
VAMP7-204ENST00000463317 CGNL1Q0VF96 1302 aa8.44□□□□□ -1.06
VAMP7-204ENST00000463317 CD44P16070 742 aaKnown RBP8.43□□□□□ -1.06
VAMP7-204ENST00000463317 RC3H1Q5TC82 1133 aaKnown RBP8.43□□□□□ -1.06
VAMP7-204ENST00000463317 SAPCD2Q86UD0 394 aa8.43□□□□□ -1.06
VAMP7-204ENST00000463317 LTV1Q96GA3 475 aaPredicted RBP8.43□□□□□ -1.06
VAMP7-204ENST00000463317 HHIPL1Q96JK4 782 aa8.43□□□□□ -1.06
VAMP7-204ENST00000463317 ZIC5Q96T25 663 aa8.43□□□□□ -1.06
VAMP7-204ENST00000463317 SMG6Q86US8 1419 aaKnown RBP8.43□□□□□ -1.06
VAMP7-204ENST00000463317 CD163L1Q9NR16 1453 aa8.43□□□□□ -1.06
VAMP7-204ENST00000463317 RGPD2P0DJD1 1756 aa8.43□□□□□ -1.06
VAMP7-204ENST00000463317 UNC80Q8N2C7 3258 aa8.42□□□□□ -1.06
VAMP7-204ENST00000463317 RPS6KA4O75676 772 aa8.42□□□□□ -1.06
VAMP7-204ENST00000463317 TM4SF1P30408 202 aa8.42□□□□□ -1.06
VAMP7-204ENST00000463317 MPHOSPH9Q99550 1183 aa8.42□□□□□ -1.06
VAMP7-204ENST00000463317 SAGE1Q9NXZ1 904 aa8.42□□□□□ -1.06
VAMP7-204ENST00000463317 PCDH11XQ9BZA7 1347 aa8.42□□□□□ -1.06
VAMP7-204ENST00000463317 PCDH11YQ9BZA8 1340 aa8.42□□□□□ -1.06
VAMP7-204ENST00000463317 RANBP2P49792 3224 aaKnown RBP8.42□□□□□ -1.06
VAMP7-204ENST00000463317 CEP290O15078 2479 aa8.41□□□□□ -1.06
VAMP7-204ENST00000463317 KDRP35968 1356 aa8.41□□□□□ -1.06
VAMP7-204ENST00000463317 CYP27B1O15528 508 aa8.41□□□□□ -1.06
VAMP7-204ENST00000463317 MIER1Q8N108 512 aa8.41□□□□□ -1.06
VAMP7-204ENST00000463317 COL25A1Q9BXS0 654 aaPredicted RBP8.41□□□□□ -1.06
VAMP7-204ENST00000463317 SRP68Q9UHB9 627 aaKnown RBP8.41□□□□□ -1.06
VAMP7-204ENST00000463317 ASAP1Q9ULH1 1129 aa8.41□□□□□ -1.06
VAMP7-204ENST00000463317 NRXN2Q9P2S2 1712 aa8.4□□□□□ -1.06
VAMP7-204ENST00000463317 MAP3K19Q56UN5 1328 aa8.4□□□□□ -1.06
VAMP7-204ENST00000463317 CNTNAP4Q9C0A0 1308 aa8.4□□□□□ -1.06
VAMP7-204ENST00000463317 ZNF541Q9H0D2 1346 aa8.4□□□□□ -1.06
VAMP7-204ENST00000463317 USP42Q9H9J4 1324 aaKnown RBP8.4□□□□□ -1.06
VAMP7-204ENST00000463317 TRAF5O00463 557 aa8.4□□□□□ -1.06
VAMP7-204ENST00000463317 C21orf2O43822 256 aa8.4□□□□□ -1.06
VAMP7-204ENST00000463317 SLC4A9Q96Q91 983 aa8.4□□□□□ -1.06
VAMP7-204ENST00000463317 TAOK3Q9H2K8 898 aa8.4□□□□□ -1.06
VAMP7-204ENST00000463317 KDM2AQ9Y2K7 1162 aa8.4□□□□□ -1.06
VAMP7-204ENST00000463317 AFDNP55196 1824 aaKnown RBP8.4□□□□□ -1.07
VAMP7-204ENST00000463317 COL5A3P25940 1745 aaPredicted RBP8.4□□□□□ -1.07
VAMP7-204ENST00000463317 ZNF831Q5JPB2 1677 aa8.4□□□□□ -1.07
VAMP7-204ENST00000463317 MYH14Q7Z406 1995 aaKnown RBP8.39□□□□□ -1.07
VAMP7-204ENST00000463317 RNF123Q5XPI4 1314 aa8.39□□□□□ -1.07
VAMP7-204ENST00000463317 NOGQ13253 232 aa8.39□□□□□ -1.07
VAMP7-204ENST00000463317 PKN2Q16513 984 aaKnown RBP8.39□□□□□ -1.07
VAMP7-204ENST00000463317 C2CD5Q86YS7 1000 aa8.39□□□□□ -1.07
VAMP7-204ENST00000463317 OTUD5Q96G74 571 aa8.39□□□□□ -1.07
VAMP7-204ENST00000463317 KTN1Q86UP2 1357 aaKnown RBP8.38□□□□□ -1.07
VAMP7-204ENST00000463317 NKX1-1Q15270 411 aaPredicted RBP8.38□□□□□ -1.07
VAMP7-204ENST00000463317 AKAP4Q5JQC9 854 aa8.38□□□□□ -1.07
VAMP7-204ENST00000463317 NBPF6Q5VWK0 638 aa8.38□□□□□ -1.07
VAMP7-204ENST00000463317 NME9Q86XW9 330 aa8.38□□□□□ -1.07
VAMP7-204ENST00000463317 RAPGEF4Q8WZA2 1011 aa8.38□□□□□ -1.07
VAMP7-204ENST00000463317 NBPF4Q96M43 638 aa8.38□□□□□ -1.07
VAMP7-204ENST00000463317 HTTP42858 3142 aa8.38□□□□□ -1.07
VAMP7-204ENST00000463317 CENPJQ9HC77 1338 aaPredicted RBP8.37□□□□□ -1.07
VAMP7-204ENST00000463317 LOC105371045A0A1W2PR82 267 aa8.37□□□□□ -1.07
VAMP7-204ENST00000463317 H0YIN7 160 aa8.37□□□□□ -1.07
VAMP7-204ENST00000463317 PLCD3Q8N3E9 789 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms