RNA–Protein interactions for RNA: ENST00000463200.5

LINC00879-202, long intergenic non-protein coding RNA 879, humanhuman

TSL 1 (best) BASIC

Gene LINC00879, Length 1,041 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-202ENST00000463200 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
LINC00879-202ENST00000463200 CANXP27824 592 aaKnown RBP16.05■□□□□ 0.16
LINC00879-202ENST00000463200 TAF7Q15545 349 aaPredicted RBP16.05■□□□□ 0.16
LINC00879-202ENST00000463200 INTS5Q6P9B9 1019 aaKnown RBP16.05■□□□□ 0.16
LINC00879-202ENST00000463200 ZNF496Q96IT1 587 aaPredicted RBP16.05■□□□□ 0.16
LINC00879-202ENST00000463200 PRKRIP1Q9H875 184 aaPredicted RBP16.05■□□□□ 0.16
LINC00879-202ENST00000463200 USP42Q9H9J4 1324 aaKnown RBP16.04■□□□□ 0.16
LINC00879-202ENST00000463200 ZNF316A6NFI3 1004 aaPredicted RBP16.04■□□□□ 0.16
LINC00879-202ENST00000463200 GYS1P13807 737 aa16.04■□□□□ 0.16
LINC00879-202ENST00000463200 DCTN1Q14203 1278 aa16.04■□□□□ 0.16
LINC00879-202ENST00000463200 NLGN2Q8NFZ4 835 aa16.04■□□□□ 0.16
LINC00879-202ENST00000463200 PLEKHF1Q96S99 279 aa16.04■□□□□ 0.16
LINC00879-202ENST00000463200 ZNF330Q9Y3S2 320 aaPredicted RBP16.04■□□□□ 0.16
LINC00879-202ENST00000463200 COL15A1P39059 1388 aa16.03■□□□□ 0.16
LINC00879-202ENST00000463200 SOS1Q07889 1333 aaPredicted RBP16.03■□□□□ 0.16
LINC00879-202ENST00000463200 CHD4Q14839 1912 aa16.03■□□□□ 0.16
LINC00879-202ENST00000463200 SNRPA1P09661 255 aaKnown RBP16.02■□□□□ 0.16
LINC00879-202ENST00000463200 ZBTB1Q9Y2K1 713 aa16.02■□□□□ 0.16
LINC00879-202ENST00000463200 RIPK4P57078 832 aa16.01■□□□□ 0.15
LINC00879-202ENST00000463200 USPL1Q5W0Q7 1092 aa16.01■□□□□ 0.15
LINC00879-202ENST00000463200 SRP68Q9UHB9 627 aaKnown RBP16.01■□□□□ 0.15
LINC00879-202ENST00000463200 NARFQ9UHQ1 456 aa16.01■□□□□ 0.15
LINC00879-202ENST00000463200 IL6STP40189 918 aaPredicted RBP16■□□□□ 0.15
LINC00879-202ENST00000463200 RUNDC1Q96C34 613 aa16■□□□□ 0.15
LINC00879-202ENST00000463200 TGFB2P61812 414 aa15.99■□□□□ 0.15
LINC00879-202ENST00000463200 FKBP8Q14318 412 aa15.99■□□□□ 0.15
LINC00879-202ENST00000463200 ANP32CO43423 234 aa15.98■□□□□ 0.15
LINC00879-202ENST00000463200 KCNQ3O43525 872 aa15.98■□□□□ 0.15
LINC00879-202ENST00000463200 NPHP1O15259 732 aa15.97■□□□□ 0.15
LINC00879-202ENST00000463200 TMPOP42166 694 aaKnown RBP15.97■□□□□ 0.15
LINC00879-202ENST00000463200 EIF5P55010 431 aaKnown RBP15.97■□□□□ 0.15
LINC00879-202ENST00000463200 NEUROD2Q15784 382 aa15.97■□□□□ 0.15
LINC00879-202ENST00000463200 CCDC146Q8IYE0 955 aa15.97■□□□□ 0.15
LINC00879-202ENST00000463200 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.15
LINC00879-202ENST00000463200 A1BGP04217 495 aa15.96■□□□□ 0.15
LINC00879-202ENST00000463200 MIS18AQ9NYP9 233 aa15.96■□□□□ 0.15
LINC00879-202ENST00000463200 TSPYL4Q9UJ04 414 aa15.96■□□□□ 0.15
LINC00879-202ENST00000463200 ZNF652Q9Y2D9 606 aa15.96■□□□□ 0.15
LINC00879-202ENST00000463200 KDM3BQ7LBC6 1761 aa15.95■□□□□ 0.14
LINC00879-202ENST00000463200 BABAM1Q9NWV8 329 aa15.95■□□□□ 0.14
LINC00879-202ENST00000463200 ADAMTS8Q9UP79 889 aa15.95■□□□□ 0.14
LINC00879-202ENST00000463200 USP16Q9Y5T5 823 aa15.95■□□□□ 0.14
LINC00879-202ENST00000463200 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
LINC00879-202ENST00000463200 C10orf71Q711Q0 1435 aa15.94■□□□□ 0.14
LINC00879-202ENST00000463200 TM4SF1P30408 202 aa15.94■□□□□ 0.14
LINC00879-202ENST00000463200 BICDL1Q6ZP65 573 aa15.94■□□□□ 0.14
LINC00879-202ENST00000463200 DZIP3Q86Y13 1208 aaKnown RBP15.94■□□□□ 0.14
LINC00879-202ENST00000463200 THUMPD2Q9BTF0 503 aaKnown RBP15.94■□□□□ 0.14
LINC00879-202ENST00000463200 TBC1D2BQ9UPU7 963 aa15.94■□□□□ 0.14
LINC00879-202ENST00000463200 N4BP2Q86UW6 1770 aaPredicted RBP15.93■□□□□ 0.14
LINC00879-202ENST00000463200 POLRMTO00411 1230 aaKnown RBP15.93■□□□□ 0.14
LINC00879-202ENST00000463200 RRP7AQ9Y3A4 280 aaKnown RBP15.93■□□□□ 0.14
LINC00879-202ENST00000463200 A0A0G2JLW4 131 aa15.92■□□□□ 0.14
LINC00879-202ENST00000463200 SERPINB2P05120 415 aa15.92■□□□□ 0.14
LINC00879-202ENST00000463200 YBX3P16989 372 aaKnown RBP eCLIP15.92■□□□□ 0.14
LINC00879-202ENST00000463200 CALD1Q05682 793 aaKnown RBP15.92■□□□□ 0.14
LINC00879-202ENST00000463200 DDR1Q08345 913 aa15.92■□□□□ 0.14
LINC00879-202ENST00000463200 NFIXQ14938 502 aa15.92■□□□□ 0.14
LINC00879-202ENST00000463200 SETDB2Q96T68 719 aa15.92■□□□□ 0.14
LINC00879-202ENST00000463200 WWC3Q9ULE0 1092 aa15.92■□□□□ 0.14
LINC00879-202ENST00000463200 BCS1LQ9Y276 419 aa15.92■□□□□ 0.14
LINC00879-202ENST00000463200 LAS1LQ9Y4W2 734 aaKnown RBP15.92■□□□□ 0.14
LINC00879-202ENST00000463200 SCN7AQ01118 1682 aa15.92■□□□□ 0.14
LINC00879-202ENST00000463200 EIF4A1P60842 406 aaKnown RBP15.91■□□□□ 0.14
LINC00879-202ENST00000463200 PIM2Q9P1W9 311 aa15.91■□□□□ 0.14
LINC00879-202ENST00000463200 PXDNLA1KZ92 1463 aa15.91■□□□□ 0.14
LINC00879-202ENST00000463200 CARMIL3Q8ND23 1372 aa15.9■□□□□ 0.14
LINC00879-202ENST00000463200 AFDNP55196 1824 aaKnown RBP15.9■□□□□ 0.14
LINC00879-202ENST00000463200 PRAMEF22A3QJZ6 481 aa15.9■□□□□ 0.14
LINC00879-202ENST00000463200 GIGYF1O75420 1035 aaPredicted RBP15.9■□□□□ 0.14
LINC00879-202ENST00000463200 DPEP1P16444 411 aa15.9■□□□□ 0.14
LINC00879-202ENST00000463200 CLEC4GQ6UXB4 293 aa15.9■□□□□ 0.14
LINC00879-202ENST00000463200 KIF6Q6ZMV9 814 aa15.9■□□□□ 0.14
LINC00879-202ENST00000463200 PIP4K2AP48426 406 aaPredicted RBP15.89■□□□□ 0.13
LINC00879-202ENST00000463200 ST5P78524 1137 aa15.89■□□□□ 0.13
LINC00879-202ENST00000463200 BCL2L12Q9HB09 334 aa15.89■□□□□ 0.13
LINC00879-202ENST00000463200 PDZRN3Q9UPQ7 1066 aa15.89■□□□□ 0.13
LINC00879-202ENST00000463200 BCORQ6W2J9 1755 aa15.88■□□□□ 0.13
LINC00879-202ENST00000463200 DALRD3Q5D0E6 543 aaKnown RBP15.88■□□□□ 0.13
LINC00879-202ENST00000463200 TBC1D9BQ66K14 1250 aa15.88■□□□□ 0.13
LINC00879-202ENST00000463200 NGEFQ8N5V2 710 aa15.88■□□□□ 0.13
LINC00879-202ENST00000463200 MRS2Q9HD23 443 aa15.88■□□□□ 0.13
LINC00879-202ENST00000463200 ERBB4Q15303 1308 aa15.88■□□□□ 0.13
LINC00879-202ENST00000463200 H0YIN7 160 aa15.87■□□□□ 0.13
LINC00879-202ENST00000463200 RGL2O15211 777 aa15.87■□□□□ 0.13
LINC00879-202ENST00000463200 CAMTA2O94983 1202 aa15.87■□□□□ 0.13
LINC00879-202ENST00000463200 PDE6BP35913 854 aa15.87■□□□□ 0.13
LINC00879-202ENST00000463200 CNBD1Q8NA66 436 aa15.87■□□□□ 0.13
LINC00879-202ENST00000463200 NRXN2Q9P2S2 1712 aa15.86■□□□□ 0.13
LINC00879-202ENST00000463200 MYL6BP14649 208 aa15.86■□□□□ 0.13
LINC00879-202ENST00000463200 EIF2S2P20042 333 aaKnown RBP15.86■□□□□ 0.13
LINC00879-202ENST00000463200 GTF2E1P29083 439 aaPredicted RBP15.86■□□□□ 0.13
LINC00879-202ENST00000463200 ARHGAP27Q6ZUM4 889 aa15.86■□□□□ 0.13
LINC00879-202ENST00000463200 KIAA1551Q9HCM1 1747 aa15.85■□□□□ 0.13
LINC00879-202ENST00000463200 NBPF26B4DH59 902 aa15.85■□□□□ 0.13
LINC00879-202ENST00000463200 APAF1O14727 1248 aa15.85■□□□□ 0.13
LINC00879-202ENST00000463200 NBPF10Q6P3W6 841 aaKnown RBP15.85■□□□□ 0.13
LINC00879-202ENST00000463200 NBPF5PQ86XG9 351 aaPredicted RBP15.85■□□□□ 0.13
LINC00879-202ENST00000463200 NBPF15Q8N660 670 aa15.85■□□□□ 0.13
LINC00879-202ENST00000463200 ZNF784Q8NCA9 323 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms