RNA–Protein interactions for RNA: ENST00000463197.1

CCR9-205, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 4

Gene CCR9, Length 349 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-205ENST00000463197 CCDC24Q8N4L8 307 aa7.7□□□□□ -1.18
CCR9-205ENST00000463197 RSPH6AQ9H0K4 717 aa7.7□□□□□ -1.18
CCR9-205ENST00000463197 NMRK2Q9NPI5 230 aa7.7□□□□□ -1.18
CCR9-205ENST00000463197 NARFQ9UHQ1 456 aa7.7□□□□□ -1.18
CCR9-205ENST00000463197 NPC1L1Q9UHC9 1359 aa7.7□□□□□ -1.18
CCR9-205ENST00000463197 C4AP0C0L4 1744 aa7.69□□□□□ -1.18
CCR9-205ENST00000463197 MRC1P22897 1456 aa7.69□□□□□ -1.18
CCR9-205ENST00000463197 N4BP2Q86UW6 1770 aaPredicted RBP7.69□□□□□ -1.18
CCR9-205ENST00000463197 U2SURPO15042 1029 aaKnown RBP7.69□□□□□ -1.18
CCR9-205ENST00000463197 PPP2R1AP30153 589 aa7.69□□□□□ -1.18
CCR9-205ENST00000463197 PIP4K2AP48426 406 aaPredicted RBP7.69□□□□□ -1.18
CCR9-205ENST00000463197 ZNF790Q6PG37 636 aa7.69□□□□□ -1.18
CCR9-205ENST00000463197 VSIG10Q8N0Z9 540 aa7.69□□□□□ -1.18
CCR9-205ENST00000463197 DNAJC5GQ8N7S2 189 aa7.69□□□□□ -1.18
CCR9-205ENST00000463197 PIM2Q9P1W9 311 aa7.69□□□□□ -1.18
CCR9-205ENST00000463197 USP16Q9Y5T5 823 aa7.69□□□□□ -1.18
CCR9-205ENST00000463197 CARMIL3Q8ND23 1372 aa7.69□□□□□ -1.18
CCR9-205ENST00000463197 KIF13BQ9NQT8 1826 aa7.68□□□□□ -1.18
CCR9-205ENST00000463197 PCNTO95613 3336 aa7.68□□□□□ -1.18
CCR9-205ENST00000463197 SERPINB2P05120 415 aa7.68□□□□□ -1.18
CCR9-205ENST00000463197 DCTN1Q14203 1278 aa7.68□□□□□ -1.18
CCR9-205ENST00000463197 C9orf131Q5VYM1 1079 aa7.68□□□□□ -1.18
CCR9-205ENST00000463197 TBC1D9BQ66K14 1250 aa7.68□□□□□ -1.18
CCR9-205ENST00000463197 TBC1D2BQ9UPU7 963 aa7.68□□□□□ -1.18
CCR9-205ENST00000463197 CEMIPQ8WUJ3 1361 aa7.68□□□□□ -1.18
CCR9-205ENST00000463197 SCN11AQ9UI33 1791 aa7.67□□□□□ -1.18
CCR9-205ENST00000463197 GNAT3A8MTJ3 354 aa7.67□□□□□ -1.18
CCR9-205ENST00000463197 HSPA6P17066 643 aa7.67□□□□□ -1.18
CCR9-205ENST00000463197 PRKAR2BP31323 418 aa7.67□□□□□ -1.18
CCR9-205ENST00000463197 HTRA3P83110 453 aa7.67□□□□□ -1.18
CCR9-205ENST00000463197 RASSF7Q02833 373 aa7.67□□□□□ -1.18
CCR9-205ENST00000463197 DALRD3Q5D0E6 543 aaKnown RBP7.67□□□□□ -1.18
CCR9-205ENST00000463197 BICDL1Q6ZP65 573 aa7.67□□□□□ -1.18
CCR9-205ENST00000463197 MCM10Q7L590 875 aa7.67□□□□□ -1.18
CCR9-205ENST00000463197 COL15A1P39059 1388 aa7.67□□□□□ -1.18
CCR9-205ENST00000463197 HEG1Q9ULI3 1381 aa7.67□□□□□ -1.18
CCR9-205ENST00000463197 POTECB2RU33 542 aa7.66□□□□□ -1.18
CCR9-205ENST00000463197 NBPF26B4DH59 902 aa7.66□□□□□ -1.18
CCR9-205ENST00000463197 ZPR1O75312 459 aa7.66□□□□□ -1.18
CCR9-205ENST00000463197 CAMTA2O94983 1202 aa7.66□□□□□ -1.18
CCR9-205ENST00000463197 NBPF10Q6P3W6 841 aaKnown RBP7.66□□□□□ -1.18
CCR9-205ENST00000463197 NBPF15Q8N660 670 aa7.66□□□□□ -1.18
CCR9-205ENST00000463197 MIS18AQ9NYP9 233 aa7.66□□□□□ -1.18
CCR9-205ENST00000463197 BTBD11A6QL63 1104 aa7.65□□□□□ -1.18
CCR9-205ENST00000463197 NFKBIEO00221 500 aa7.65□□□□□ -1.18
CCR9-205ENST00000463197 GAS2L2Q8NHY3 880 aa7.65□□□□□ -1.18
CCR9-205ENST00000463197 PLEKHF1Q96S99 279 aa7.65□□□□□ -1.18
CCR9-205ENST00000463197 RRAGCQ9HB90 399 aa7.65□□□□□ -1.18
CCR9-205ENST00000463197 TOMM70O94826 608 aa7.64□□□□□ -1.19
CCR9-205ENST00000463197 IL6STP40189 918 aaPredicted RBP7.64□□□□□ -1.19
CCR9-205ENST00000463197 PRR5LQ6MZQ0 368 aa7.64□□□□□ -1.19
CCR9-205ENST00000463197 SLC51AQ86UW1 340 aa7.64□□□□□ -1.19
CCR9-205ENST00000463197 C2CD5Q86YS7 1000 aa7.64□□□□□ -1.19
CCR9-205ENST00000463197 RNF181Q9P0P0 153 aa7.64□□□□□ -1.19
CCR9-205ENST00000463197 BRCA1P38398 1863 aaKnown RBP7.64□□□□□ -1.19
CCR9-205ENST00000463197 STARD3NLO95772 234 aa7.63□□□□□ -1.19
CCR9-205ENST00000463197 U2AF1L5P0DN76 240 aaPredicted RBP7.63□□□□□ -1.19
CCR9-205ENST00000463197 U2AF1Q01081 240 aaKnown RBP eCLIP7.63□□□□□ -1.19
CCR9-205ENST00000463197 TEFQ10587 303 aa7.63□□□□□ -1.19
CCR9-205ENST00000463197 HLFQ16534 295 aa7.63□□□□□ -1.19
CCR9-205ENST00000463197 TTC5Q8N0Z6 440 aa7.63□□□□□ -1.19
CCR9-205ENST00000463197 FMNL2Q96PY5 1086 aa7.63□□□□□ -1.19
CCR9-205ENST00000463197 THUMPD2Q9BTF0 503 aaKnown RBP7.63□□□□□ -1.19
CCR9-205ENST00000463197 UBR2Q8IWV8 1755 aa7.63□□□□□ -1.19
CCR9-205ENST00000463197 NRXN2Q9P2S2 1712 aa7.63□□□□□ -1.19
CCR9-205ENST00000463197 C21orf2O43822 256 aa7.62□□□□□ -1.19
CCR9-205ENST00000463197 OLFM4Q6UX06 510 aa7.62□□□□□ -1.19
CCR9-205ENST00000463197 TTLL6Q8N841 843 aa7.62□□□□□ -1.19
CCR9-205ENST00000463197 C7orf43Q8WVR3 580 aa7.62□□□□□ -1.19
CCR9-205ENST00000463197 BRIP1Q9BX63 1249 aa7.62□□□□□ -1.19
CCR9-205ENST00000463197 ZNF219Q9P2Y4 722 aaPredicted RBP7.62□□□□□ -1.19
CCR9-205ENST00000463197 ZNF330Q9Y3S2 320 aaPredicted RBP7.62□□□□□ -1.19
CCR9-205ENST00000463197 H0YIN7 160 aa7.61□□□□□ -1.19
CCR9-205ENST00000463197 SRGNP10124 158 aa7.61□□□□□ -1.19
CCR9-205ENST00000463197 DZIP3Q86Y13 1208 aaKnown RBP7.61□□□□□ -1.19
CCR9-205ENST00000463197 TEX13AQ9BXU3 409 aaPredicted RBP7.61□□□□□ -1.19
CCR9-205ENST00000463197 SIPA1L3O60292 1781 aaPredicted RBP7.61□□□□□ -1.19
CCR9-205ENST00000463197 AFDNP55196 1824 aaKnown RBP7.6□□□□□ -1.19
CCR9-205ENST00000463197 A0A087WZG4 1122 aa7.6□□□□□ -1.19
CCR9-205ENST00000463197 KLRG2A4D1S0 409 aaPredicted RBP7.6□□□□□ -1.19
CCR9-205ENST00000463197 GLTPD2A6NH11 291 aa7.6□□□□□ -1.19
CCR9-205ENST00000463197 SNRPA1P09661 255 aaKnown RBP7.6□□□□□ -1.19
CCR9-205ENST00000463197 TAF7Q15545 349 aaPredicted RBP7.6□□□□□ -1.19
CCR9-205ENST00000463197 IFFO2Q5TF58 517 aa7.6□□□□□ -1.19
CCR9-205ENST00000463197 RBM46Q8TBY0 533 aaKnown RBP7.6□□□□□ -1.19
CCR9-205ENST00000463197 ZNF622Q969S3 477 aaKnown RBP eCLIP7.6□□□□□ -1.19
CCR9-205ENST00000463197 SETDB2Q96T68 719 aa7.6□□□□□ -1.19
CCR9-205ENST00000463197 HTATSF1O43719 755 aaKnown RBP7.59□□□□□ -1.19
CCR9-205ENST00000463197 POTEIP0CG38 1075 aa7.59□□□□□ -1.19
CCR9-205ENST00000463197 POTEJP0CG39 1038 aa7.59□□□□□ -1.19
CCR9-205ENST00000463197 LMNB1P20700 586 aa7.59□□□□□ -1.19
CCR9-205ENST00000463197 APLP1P51693 650 aa7.59□□□□□ -1.19
CCR9-205ENST00000463197 EIF4A1P60842 406 aaKnown RBP7.59□□□□□ -1.19
CCR9-205ENST00000463197 TTLL7Q6ZT98 887 aa7.59□□□□□ -1.19
CCR9-205ENST00000463197 LRP10Q7Z4F1 713 aa7.59□□□□□ -1.19
CCR9-205ENST00000463197 CFAP53Q96M91 514 aa7.59□□□□□ -1.19
CCR9-205ENST00000463197 NUDCQ9Y266 331 aa7.59□□□□□ -1.19
CCR9-205ENST00000463197 ANKRD31Q8N7Z5 1873 aa7.58□□□□□ -1.2
CCR9-205ENST00000463197 ARFGEF1Q9Y6D6 1849 aa7.58□□□□□ -1.2
CCR9-205ENST00000463197 FAM177BA6PVY3 158 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms