RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 DCAF5Q96JK2 942 aa11.24□□□□□ -0.61
TMEM254-207ENST00000463029 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
TMEM254-207ENST00000463029 PLEKHG2Q9H7P9 1386 aa11.24□□□□□ -0.61
TMEM254-207ENST00000463029 UBR3Q6ZT12 1888 aa11.23□□□□□ -0.61
TMEM254-207ENST00000463029 MMP10P09238 476 aa11.23□□□□□ -0.61
TMEM254-207ENST00000463029 AMOTQ4VCS5 1084 aa11.23□□□□□ -0.61
TMEM254-207ENST00000463029 AEBP1Q8IUX7 1158 aa11.23□□□□□ -0.61
TMEM254-207ENST00000463029 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
TMEM254-207ENST00000463029 KDRP35968 1356 aa11.23□□□□□ -0.61
TMEM254-207ENST00000463029 ATP10DQ9P241 1426 aa11.23□□□□□ -0.61
TMEM254-207ENST00000463029 MTHFSP49914 203 aa11.22□□□□□ -0.61
TMEM254-207ENST00000463029 CABP4P57796 275 aa11.22□□□□□ -0.61
TMEM254-207ENST00000463029 C1orf141Q5JVX7 400 aa11.22□□□□□ -0.61
TMEM254-207ENST00000463029 TRAPPC3LQ5T215 181 aa11.22□□□□□ -0.61
TMEM254-207ENST00000463029 SLC4A9Q96Q91 983 aa11.22□□□□□ -0.61
TMEM254-207ENST00000463029 RTCBQ9Y3I0 505 aaKnown RBP11.22□□□□□ -0.61
TMEM254-207ENST00000463029 KDM6AO15550 1401 aaPredicted RBP11.21□□□□□ -0.61
TMEM254-207ENST00000463029 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
TMEM254-207ENST00000463029 POTEB2H3BUK9 544 aa11.21□□□□□ -0.61
TMEM254-207ENST00000463029 SULT6B1Q6IMI4 303 aa11.21□□□□□ -0.61
TMEM254-207ENST00000463029 ZNF467Q7Z7K2 595 aaPredicted RBP11.21□□□□□ -0.61
TMEM254-207ENST00000463029 ZNF526Q8TF50 670 aaPredicted RBP11.21□□□□□ -0.61
TMEM254-207ENST00000463029 METRNQ9UJH8 293 aa11.21□□□□□ -0.61
TMEM254-207ENST00000463029 TRIM35Q9UPQ4 493 aa11.21□□□□□ -0.61
TMEM254-207ENST00000463029 RC3H1Q5TC82 1133 aaKnown RBP11.2□□□□□ -0.62
TMEM254-207ENST00000463029 GPBP1L1Q9HC44 474 aaPredicted RBP11.2□□□□□ -0.62
TMEM254-207ENST00000463029 CNTNAP4Q9C0A0 1308 aa11.19□□□□□ -0.62
TMEM254-207ENST00000463029 PTCD1O75127 700 aaKnown RBP11.19□□□□□ -0.62
TMEM254-207ENST00000463029 RFC4P35249 363 aa11.19□□□□□ -0.62
TMEM254-207ENST00000463029 NLGN1Q8N2Q7 840 aa11.19□□□□□ -0.62
TMEM254-207ENST00000463029 ARHGEF1Q92888 912 aaKnown RBP11.19□□□□□ -0.62
TMEM254-207ENST00000463029 RPS6KA4O75676 772 aa11.18□□□□□ -0.62
TMEM254-207ENST00000463029 IL13P35225 146 aa11.18□□□□□ -0.62
TMEM254-207ENST00000463029 NFATC2IPQ8NCF5 419 aa11.18□□□□□ -0.62
TMEM254-207ENST00000463029 ADCY9O60503 1353 aa11.17□□□□□ -0.62
TMEM254-207ENST00000463029 GYS1P13807 737 aa11.17□□□□□ -0.62
TMEM254-207ENST00000463029 AMER1Q5JTC6 1135 aaPredicted RBP11.17□□□□□ -0.62
TMEM254-207ENST00000463029 LHX8Q68G74 356 aa11.17□□□□□ -0.62
TMEM254-207ENST00000463029 PXDNLA1KZ92 1463 aa11.17□□□□□ -0.62
TMEM254-207ENST00000463029 CICQ96RK0 1608 aaPredicted RBP11.17□□□□□ -0.62
TMEM254-207ENST00000463029 A0A0G2JLW4 131 aa11.16□□□□□ -0.62
TMEM254-207ENST00000463029 CRKLP46109 303 aaKnown RBP11.16□□□□□ -0.62
TMEM254-207ENST00000463029 PSEN1P49768 467 aa11.16□□□□□ -0.62
TMEM254-207ENST00000463029 TGFB2P61812 414 aa11.16□□□□□ -0.62
TMEM254-207ENST00000463029 SLC39A7Q92504 469 aa11.16□□□□□ -0.62
TMEM254-207ENST00000463029 CCDC87Q9NVE4 849 aa11.16□□□□□ -0.62
TMEM254-207ENST00000463029 BCS1LQ9Y276 419 aa11.16□□□□□ -0.62
TMEM254-207ENST00000463029 PARP3Q9Y6F1 533 aa11.16□□□□□ -0.62
TMEM254-207ENST00000463029 ZNF831Q5JPB2 1677 aa11.16□□□□□ -0.62
TMEM254-207ENST00000463029 C10orf71Q711Q0 1435 aa11.16□□□□□ -0.62
TMEM254-207ENST00000463029 KIF7Q2M1P5 1343 aa11.15□□□□□ -0.62
TMEM254-207ENST00000463029 DPEP1P16444 411 aa11.15□□□□□ -0.62
TMEM254-207ENST00000463029 AKAP4Q5JQC9 854 aa11.15□□□□□ -0.62
TMEM254-207ENST00000463029 COLQQ9Y215 455 aaPredicted RBP11.15□□□□□ -0.62
TMEM254-207ENST00000463029 HMOX1P09601 288 aa11.14□□□□□ -0.63
TMEM254-207ENST00000463029 CC2D1BQ5T0F9 858 aaKnown RBP11.14□□□□□ -0.63
TMEM254-207ENST00000463029 SLC52A2Q9HAB3 445 aa11.14□□□□□ -0.63
TMEM254-207ENST00000463029 SRP68Q9UHB9 627 aaKnown RBP11.14□□□□□ -0.63
TMEM254-207ENST00000463029 COL5A3P25940 1745 aaPredicted RBP11.14□□□□□ -0.63
TMEM254-207ENST00000463029 FCHSD2O94868 740 aa11.13□□□□□ -0.63
TMEM254-207ENST00000463029 POTEJP0CG39 1038 aa11.13□□□□□ -0.63
TMEM254-207ENST00000463029 C7P10643 843 aa11.13□□□□□ -0.63
TMEM254-207ENST00000463029 PDAP1Q13442 181 aaKnown RBP11.13□□□□□ -0.63
TMEM254-207ENST00000463029 ARHGAP27Q6ZUM4 889 aa11.13□□□□□ -0.63
TMEM254-207ENST00000463029 DNAJC10Q8IXB1 793 aa11.13□□□□□ -0.63
TMEM254-207ENST00000463029 LGR6Q9HBX8 967 aa11.13□□□□□ -0.63
TMEM254-207ENST00000463029 C4AP0C0L4 1744 aa11.12□□□□□ -0.63
TMEM254-207ENST00000463029 USP42Q9H9J4 1324 aaKnown RBP11.12□□□□□ -0.63
TMEM254-207ENST00000463029 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
TMEM254-207ENST00000463029 DIAPH1O60610 1272 aaKnown RBP11.12□□□□□ -0.63
TMEM254-207ENST00000463029 ECM2O94769 699 aaPredicted RBP11.12□□□□□ -0.63
TMEM254-207ENST00000463029 DDR1Q08345 913 aa11.12□□□□□ -0.63
TMEM254-207ENST00000463029 SLC39A6Q13433 755 aa11.12□□□□□ -0.63
TMEM254-207ENST00000463029 CNGB1Q14028 1251 aaPredicted RBP11.12□□□□□ -0.63
TMEM254-207ENST00000463029 INTS5Q6P9B9 1019 aaKnown RBP11.12□□□□□ -0.63
TMEM254-207ENST00000463029 MYH14Q7Z406 1995 aaKnown RBP11.11□□□□□ -0.63
TMEM254-207ENST00000463029 RIOK3O14730 519 aaKnown RBP11.11□□□□□ -0.63
TMEM254-207ENST00000463029 RGL2O15211 777 aa11.11□□□□□ -0.63
TMEM254-207ENST00000463029 ZPR1O75312 459 aa11.11□□□□□ -0.63
TMEM254-207ENST00000463029 MTHFSDQ2M296 383 aaKnown RBP11.11□□□□□ -0.63
TMEM254-207ENST00000463029 KIF13BQ9NQT8 1826 aa11.11□□□□□ -0.63
TMEM254-207ENST00000463029 N4BP2Q86UW6 1770 aaPredicted RBP11.11□□□□□ -0.63
TMEM254-207ENST00000463029 TJP1Q07157 1748 aa11.1□□□□□ -0.63
TMEM254-207ENST00000463029 KIAA1551Q9HCM1 1747 aa11.1□□□□□ -0.63
TMEM254-207ENST00000463029 KIF3CO14782 793 aa11.1□□□□□ -0.63
TMEM254-207ENST00000463029 HSPA6P17066 643 aa11.1□□□□□ -0.63
TMEM254-207ENST00000463029 USPL1Q5W0Q7 1092 aa11.1□□□□□ -0.63
TMEM254-207ENST00000463029 PIM2Q9P1W9 311 aa11.1□□□□□ -0.63
TMEM254-207ENST00000463029 CEP350Q5VT06 3117 aa11.1□□□□□ -0.63
TMEM254-207ENST00000463029 SOS1Q07889 1333 aaPredicted RBP11.09□□□□□ -0.63
TMEM254-207ENST00000463029 SCN11AQ9UI33 1791 aa11.09□□□□□ -0.63
TMEM254-207ENST00000463029 MRC1P22897 1456 aa11.09□□□□□ -0.63
TMEM254-207ENST00000463029 PER1O15534 1290 aaPredicted RBP11.09□□□□□ -0.63
TMEM254-207ENST00000463029 CYP19A1P11511 503 aaPredicted RBP11.09□□□□□ -0.63
TMEM254-207ENST00000463029 KCNA3P22001 575 aa11.09□□□□□ -0.63
TMEM254-207ENST00000463029 CHRNA5P30532 468 aa11.09□□□□□ -0.63
TMEM254-207ENST00000463029 DALRD3Q5D0E6 543 aaKnown RBP11.09□□□□□ -0.63
TMEM254-207ENST00000463029 POLRMTO00411 1230 aaKnown RBP11.08□□□□□ -0.64
TMEM254-207ENST00000463029 U2SURPO15042 1029 aaKnown RBP11.08□□□□□ -0.64
TMEM254-207ENST00000463029 TM4SF1P30408 202 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms