RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 SLC52A2Q9HAB3 445 aa21.47■■□□□ 1.03
SND1-203ENST00000463020 CARMIL3Q8ND23 1372 aa21.47■■□□□ 1.03
SND1-203ENST00000463020 NRXN2Q9P2S2 1712 aa21.46■■□□□ 1.03
SND1-203ENST00000463020 NFIXQ14938 502 aa21.46■■□□□ 1.03
SND1-203ENST00000463020 ZBTB1Q9Y2K1 713 aa21.46■■□□□ 1.03
SND1-203ENST00000463020 AKAP4Q5JQC9 854 aa21.45■■□□□ 1.02
SND1-203ENST00000463020 RNMTO43148 476 aaKnown RBP21.44■■□□□ 1.02
SND1-203ENST00000463020 HMOX1P09601 288 aa21.44■■□□□ 1.02
SND1-203ENST00000463020 AMER1Q5JTC6 1135 aaPredicted RBP21.44■■□□□ 1.02
SND1-203ENST00000463020 KLRG1Q96E93 195 aa21.44■■□□□ 1.02
SND1-203ENST00000463020 COL15A1P39059 1388 aa21.44■■□□□ 1.02
SND1-203ENST00000463020 TNRC6CQ9HCJ0 1690 aaKnown RBP21.44■■□□□ 1.02
SND1-203ENST00000463020 VIRMAQ69YN4 1812 aaKnown RBP21.43■■□□□ 1.02
SND1-203ENST00000463020 ZPR1O75312 459 aa21.42■■□□□ 1.02
SND1-203ENST00000463020 COL13A1Q5TAT6 717 aaPredicted RBP21.42■■□□□ 1.02
SND1-203ENST00000463020 C16orf71Q8IYS4 520 aaPredicted RBP21.42■■□□□ 1.02
SND1-203ENST00000463020 DLEC1Q9Y238 1755 aa21.42■■□□□ 1.02
SND1-203ENST00000463020 KDM2BQ8NHM5 1336 aa21.41■■□□□ 1.02
SND1-203ENST00000463020 FSTL1Q12841 308 aa21.41■■□□□ 1.02
SND1-203ENST00000463020 MTHFSDQ2M296 383 aaKnown RBP21.41■■□□□ 1.02
SND1-203ENST00000463020 NARFQ9UHQ1 456 aa21.41■■□□□ 1.02
SND1-203ENST00000463020 JMYQ8N9B5 988 aa21.4■■□□□ 1.02
SND1-203ENST00000463020 UBR2Q8IWV8 1755 aa21.4■■□□□ 1.02
SND1-203ENST00000463020 KNSTRNQ9Y448 316 aa21.39■■□□□ 1.01
SND1-203ENST00000463020 CLSPNQ9HAW4 1339 aa21.38■■□□□ 1.01
SND1-203ENST00000463020 NFKBIEO00221 500 aa21.38■■□□□ 1.01
SND1-203ENST00000463020 SERPINB2P05120 415 aa21.38■■□□□ 1.01
SND1-203ENST00000463020 TIAM2Q8IVF5 1701 aa21.38■■□□□ 1.01
SND1-203ENST00000463020 CANXP27824 592 aaKnown RBP21.36■■□□□ 1.01
SND1-203ENST00000463020 BICDL1Q6ZP65 573 aa21.36■■□□□ 1.01
SND1-203ENST00000463020 C2CD5Q86YS7 1000 aa21.36■■□□□ 1.01
SND1-203ENST00000463020 CCDC24Q8N4L8 307 aa21.36■■□□□ 1.01
SND1-203ENST00000463020 ANKRD31Q8N7Z5 1873 aa21.36■■□□□ 1.01
SND1-203ENST00000463020 COL11A2P13942 1736 aaPredicted RBP21.35■■□□□ 1.01
SND1-203ENST00000463020 POTECB2RU33 542 aa21.35■■□□□ 1.01
SND1-203ENST00000463020 KIF7Q2M1P5 1343 aa21.34■■□□□ 1.01
SND1-203ENST00000463020 LMNB1P20700 586 aa21.34■■□□□ 1.01
SND1-203ENST00000463020 COL3A1P02461 1466 aaPredicted RBP21.33■■□□□ 1.01
SND1-203ENST00000463020 TBC1D9BQ66K14 1250 aa21.33■■□□□ 1.01
SND1-203ENST00000463020 SMC1BQ8NDV3 1235 aa21.33■■□□□ 1.01
SND1-203ENST00000463020 SCN7AQ01118 1682 aa21.32■■□□□ 1
SND1-203ENST00000463020 GLTPD2A6NH11 291 aa21.32■■□□□ 1
SND1-203ENST00000463020 EIF5P55010 431 aaKnown RBP21.32■■□□□ 1
SND1-203ENST00000463020 TTLL6Q8N841 843 aa21.32■■□□□ 1
SND1-203ENST00000463020 CCDC88AQ3V6T2 1871 aa21.31■■□□□ 1
SND1-203ENST00000463020 VSIG10Q8N0Z9 540 aa21.31■■□□□ 1
SND1-203ENST00000463020 ZNF496Q96IT1 587 aaPredicted RBP21.31■■□□□ 1
SND1-203ENST00000463020 ZNF219Q9P2Y4 722 aaPredicted RBP21.31■■□□□ 1
SND1-203ENST00000463020 ZC3H4Q9UPT8 1303 aaKnown RBP21.3■■□□□ 1
SND1-203ENST00000463020 PER1O15534 1290 aaPredicted RBP21.3■■□□□ 1
SND1-203ENST00000463020 CC2D1BQ5T0F9 858 aaKnown RBP21.3■■□□□ 1
SND1-203ENST00000463020 CAPN15O75808 1086 aa21.29■■□□□ 1
SND1-203ENST00000463020 IL17REQ8NFR9 667 aa21.29■■□□□ 1
SND1-203ENST00000463020 SIPA1L3O60292 1781 aaPredicted RBP21.28■■□□□ 1
SND1-203ENST00000463020 H0YIN7 160 aa21.28■■□□□ 1
SND1-203ENST00000463020 DIAPH1O60610 1272 aaKnown RBP21.28■■□□□ 1
SND1-203ENST00000463020 PRR5LQ6MZQ0 368 aa21.28■■□□□ 1
SND1-203ENST00000463020 TBC1D2BQ9UPU7 963 aa21.28■■□□□ 1
SND1-203ENST00000463020 C21orf2O43822 256 aa21.27■■□□□ 1
SND1-203ENST00000463020 VEGFAP15692 232 aaPredicted RBP21.27■■□□□ 1
SND1-203ENST00000463020 HEG1Q9ULI3 1381 aa21.26■□□□□ 0.99
SND1-203ENST00000463020 KCNQ3O43525 872 aa21.26■□□□□ 0.99
SND1-203ENST00000463020 ZNF330Q9Y3S2 320 aaPredicted RBP21.26■□□□□ 0.99
SND1-203ENST00000463020 POTEIP0CG38 1075 aa21.25■□□□□ 0.99
SND1-203ENST00000463020 POTEJP0CG39 1038 aa21.25■□□□□ 0.99
SND1-203ENST00000463020 CNGB1Q14028 1251 aaPredicted RBP21.25■□□□□ 0.99
SND1-203ENST00000463020 FER1L6Q2WGJ9 1857 aa21.25■□□□□ 0.99
SND1-203ENST00000463020 ZNF622Q969S3 477 aaKnown RBP eCLIP21.25■□□□□ 0.99
SND1-203ENST00000463020 A1BGP04217 495 aa21.24■□□□□ 0.99
SND1-203ENST00000463020 PIP4K2AP48426 406 aaPredicted RBP21.24■□□□□ 0.99
SND1-203ENST00000463020 ZNF790Q6PG37 636 aa21.24■□□□□ 0.99
SND1-203ENST00000463020 TTC5Q8N0Z6 440 aa21.24■□□□□ 0.99
SND1-203ENST00000463020 STARD3NLO95772 234 aa21.23■□□□□ 0.99
SND1-203ENST00000463020 HSPA1AP0DMV8 641 aaKnown RBP21.23■□□□□ 0.99
SND1-203ENST00000463020 HSPA1BP0DMV9 641 aaKnown RBP21.23■□□□□ 0.99
SND1-203ENST00000463020 SLX4Q8IY92 1834 aa21.22■□□□□ 0.99
SND1-203ENST00000463020 PRAMEF22A3QJZ6 481 aa21.22■□□□□ 0.99
SND1-203ENST00000463020 CAMTA2O94983 1202 aa21.22■□□□□ 0.99
SND1-203ENST00000463020 BRIP1Q9BX63 1249 aa21.22■□□□□ 0.99
SND1-203ENST00000463020 A0A087WZG4 1122 aa21.21■□□□□ 0.99
SND1-203ENST00000463020 U2SURPO15042 1029 aaKnown RBP21.21■□□□□ 0.99
SND1-203ENST00000463020 TNS4Q8IZW8 715 aa21.21■□□□□ 0.99
SND1-203ENST00000463020 PHACTR3Q96KR7 559 aa21.21■□□□□ 0.99
SND1-203ENST00000463020 BCORQ6W2J9 1755 aa21.2■□□□□ 0.99
SND1-203ENST00000463020 CACNA1SQ13698 1873 aa21.2■□□□□ 0.98
SND1-203ENST00000463020 DICER1Q9UPY3 1922 aaKnown RBP21.2■□□□□ 0.98
SND1-203ENST00000463020 GNAT3A8MTJ3 354 aa21.2■□□□□ 0.98
SND1-203ENST00000463020 ERFEQ4G0M1 354 aa21.2■□□□□ 0.98
SND1-203ENST00000463020 CEMIPQ8WUJ3 1361 aa21.2■□□□□ 0.98
SND1-203ENST00000463020 DDNO94850 711 aaPredicted RBP21.19■□□□□ 0.98
SND1-203ENST00000463020 IL6STP40189 918 aaPredicted RBP21.19■□□□□ 0.98
SND1-203ENST00000463020 TEFQ10587 303 aa21.19■□□□□ 0.98
SND1-203ENST00000463020 PDE6BP35913 854 aa21.18■□□□□ 0.98
SND1-203ENST00000463020 PRPF40BQ6NWY9 871 aaKnown RBP21.17■□□□□ 0.98
SND1-203ENST00000463020 CCER1Q8TC90 406 aaPredicted RBP21.17■□□□□ 0.98
SND1-203ENST00000463020 USP16Q9Y5T5 823 aa21.17■□□□□ 0.98
SND1-203ENST00000463020 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
SND1-203ENST00000463020 SRGNP10124 158 aa21.16■□□□□ 0.98
SND1-203ENST00000463020 OLFM4Q6UX06 510 aa21.16■□□□□ 0.98
SND1-203ENST00000463020 CNBD1Q8NA66 436 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 252.2 ms