RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 FYB1O15117 783 aa11.13□□□□□ -0.63
GARNL3-212ENST00000463005 SSFA2P28290 1259 aa11.13□□□□□ -0.63
GARNL3-212ENST00000463005 CAMK2BQ13554 666 aa11.13□□□□□ -0.63
GARNL3-212ENST00000463005 CCER1Q8TC90 406 aaPredicted RBP11.13□□□□□ -0.63
GARNL3-212ENST00000463005 INSRP06213 1382 aa11.13□□□□□ -0.63
GARNL3-212ENST00000463005 KIF24Q5T7B8 1368 aa11.13□□□□□ -0.63
GARNL3-212ENST00000463005 CEP350Q5VT06 3117 aa11.12□□□□□ -0.63
GARNL3-212ENST00000463005 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.12□□□□□ -0.63
GARNL3-212ENST00000463005 KIF3CO14782 793 aa11.12□□□□□ -0.63
GARNL3-212ENST00000463005 APLP1P51693 650 aa11.12□□□□□ -0.63
GARNL3-212ENST00000463005 RRS1Q15050 365 aaKnown RBP11.12□□□□□ -0.63
GARNL3-212ENST00000463005 POTEHQ6S545 545 aa11.12□□□□□ -0.63
GARNL3-212ENST00000463005 USHBP1Q8N6Y0 703 aa11.12□□□□□ -0.63
GARNL3-212ENST00000463005 TESK2Q96S53 571 aa11.12□□□□□ -0.63
GARNL3-212ENST00000463005 EMILIN3Q9NT22 766 aa11.12□□□□□ -0.63
GARNL3-212ENST00000463005 BOLA1Q9Y3E2 137 aa11.12□□□□□ -0.63
GARNL3-212ENST00000463005 ST20-MTHFSA0A0A6YYL1 179 aa11.11□□□□□ -0.63
GARNL3-212ENST00000463005 CYP27B1O15528 508 aa11.11□□□□□ -0.63
GARNL3-212ENST00000463005 TOMM70O94826 608 aa11.11□□□□□ -0.63
GARNL3-212ENST00000463005 HSP90AB2PQ58FF8 381 aa11.11□□□□□ -0.63
GARNL3-212ENST00000463005 MAP2P11137 1827 aaKnown RBP11.11□□□□□ -0.63
GARNL3-212ENST00000463005 PLCG2P16885 1265 aa11.1□□□□□ -0.63
GARNL3-212ENST00000463005 TGFB2P61812 414 aa11.1□□□□□ -0.63
GARNL3-212ENST00000463005 PIGBQ92521 554 aa11.1□□□□□ -0.63
GARNL3-212ENST00000463005 GGNBP2Q9H3C7 697 aa11.1□□□□□ -0.63
GARNL3-212ENST00000463005 SPG7Q9UQ90 795 aa11.1□□□□□ -0.63
GARNL3-212ENST00000463005 TOGARAM1Q9Y4F4 1720 aa11.09□□□□□ -0.63
GARNL3-212ENST00000463005 KIF13BQ9NQT8 1826 aa11.09□□□□□ -0.63
GARNL3-212ENST00000463005 FLT4P35916 1363 aa11.09□□□□□ -0.63
GARNL3-212ENST00000463005 LOC102724428A0A0B4J2F2 783 aa11.09□□□□□ -0.63
GARNL3-212ENST00000463005 C2orf72A6NCS6 295 aa11.09□□□□□ -0.63
GARNL3-212ENST00000463005 DPYSL4O14531 572 aa11.09□□□□□ -0.63
GARNL3-212ENST00000463005 PHF14O94880 888 aa11.09□□□□□ -0.63
GARNL3-212ENST00000463005 MLLT3P42568 568 aaPredicted RBP11.09□□□□□ -0.63
GARNL3-212ENST00000463005 CLCN6P51797 869 aa11.09□□□□□ -0.63
GARNL3-212ENST00000463005 SIK1P57059 783 aa11.09□□□□□ -0.63
GARNL3-212ENST00000463005 PKD1L3Q7Z443 1732 aa11.09□□□□□ -0.63
GARNL3-212ENST00000463005 TONSLQ96HA7 1378 aa11.08□□□□□ -0.64
GARNL3-212ENST00000463005 POTEFA5A3E0 1075 aa11.08□□□□□ -0.64
GARNL3-212ENST00000463005 IER5LQ5T953 404 aa11.08□□□□□ -0.64
GARNL3-212ENST00000463005 TMEM92Q6UXU6 159 aa11.08□□□□□ -0.64
GARNL3-212ENST00000463005 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
GARNL3-212ENST00000463005 DNAJC5GQ8N7S2 189 aa11.08□□□□□ -0.64
GARNL3-212ENST00000463005 TMC2Q8TDI7 906 aa11.08□□□□□ -0.64
GARNL3-212ENST00000463005 DCBLD2Q96PD2 775 aa11.08□□□□□ -0.64
GARNL3-212ENST00000463005 TMEM121BQ9BXQ6 578 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-212ENST00000463005 CICQ96RK0 1608 aaPredicted RBP11.08□□□□□ -0.64
GARNL3-212ENST00000463005 ATP6V1AP38606 617 aa11.07□□□□□ -0.64
GARNL3-212ENST00000463005 TMF1P82094 1093 aa11.07□□□□□ -0.64
GARNL3-212ENST00000463005 NLGN1Q8N2Q7 840 aa11.07□□□□□ -0.64
GARNL3-212ENST00000463005 LINC00116Q8NCU8 138 aa11.07□□□□□ -0.64
GARNL3-212ENST00000463005 TMOD3Q9NYL9 352 aa11.07□□□□□ -0.64
GARNL3-212ENST00000463005 KIF20BQ96Q89 1820 aa11.07□□□□□ -0.64
GARNL3-212ENST00000463005 N4BP2Q86UW6 1770 aaPredicted RBP11.06□□□□□ -0.64
GARNL3-212ENST00000463005 GNPATO15228 680 aa11.06□□□□□ -0.64
GARNL3-212ENST00000463005 MMP10P09238 476 aa11.06□□□□□ -0.64
GARNL3-212ENST00000463005 POTEIP0CG38 1075 aa11.06□□□□□ -0.64
GARNL3-212ENST00000463005 CDCA8Q53HL2 280 aa11.06□□□□□ -0.64
GARNL3-212ENST00000463005 TRAPPC3LQ5T215 181 aa11.06□□□□□ -0.64
GARNL3-212ENST00000463005 WWC3Q9ULE0 1092 aa11.06□□□□□ -0.64
GARNL3-212ENST00000463005 ARHGAP27Q6ZUM4 889 aa11.05□□□□□ -0.64
GARNL3-212ENST00000463005 SMIM5Q71RC9 77 aa11.05□□□□□ -0.64
GARNL3-212ENST00000463005 PLPP6Q8IY26 295 aa11.05□□□□□ -0.64
GARNL3-212ENST00000463005 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
GARNL3-212ENST00000463005 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
GARNL3-212ENST00000463005 BCS1LQ9Y276 419 aa11.05□□□□□ -0.64
GARNL3-212ENST00000463005 RTCBQ9Y3I0 505 aaKnown RBP11.05□□□□□ -0.64
GARNL3-212ENST00000463005 NCAPD2Q15021 1401 aa11.04□□□□□ -0.64
GARNL3-212ENST00000463005 SEC24BO95487 1268 aa11.04□□□□□ -0.64
GARNL3-212ENST00000463005 FOXK1P85037 733 aa11.04□□□□□ -0.64
GARNL3-212ENST00000463005 ITPK1Q13572 414 aa11.04□□□□□ -0.64
GARNL3-212ENST00000463005 RC3H1Q5TC82 1133 aaKnown RBP11.04□□□□□ -0.64
GARNL3-212ENST00000463005 RBM46Q8TBY0 533 aaKnown RBP11.04□□□□□ -0.64
GARNL3-212ENST00000463005 CCDC87Q9NVE4 849 aa11.04□□□□□ -0.64
GARNL3-212ENST00000463005 ASAP1Q9ULH1 1129 aa11.04□□□□□ -0.64
GARNL3-212ENST00000463005 ARIH1Q9Y4X5 557 aaPredicted RBP11.04□□□□□ -0.64
GARNL3-212ENST00000463005 ZNF831Q5JPB2 1677 aa11.04□□□□□ -0.64
GARNL3-212ENST00000463005 WASHC2AQ641Q2 1341 aa11.04□□□□□ -0.64
GARNL3-212ENST00000463005 BRCA1P38398 1863 aaKnown RBP11.04□□□□□ -0.64
GARNL3-212ENST00000463005 KIAA1551Q9HCM1 1747 aa11.04□□□□□ -0.64
GARNL3-212ENST00000463005 ARFGEF1Q9Y6D6 1849 aa11.03□□□□□ -0.64
GARNL3-212ENST00000463005 A0A0G2JLW4 131 aa11.03□□□□□ -0.64
GARNL3-212ENST00000463005 G3V3G9 751 aa11.03□□□□□ -0.64
GARNL3-212ENST00000463005 RBM26Q5T8P6 1007 aaKnown RBP11.03□□□□□ -0.64
GARNL3-212ENST00000463005 C16orf71Q8IYS4 520 aaPredicted RBP11.03□□□□□ -0.64
GARNL3-212ENST00000463005 ATG3Q9NT62 314 aa11.03□□□□□ -0.64
GARNL3-212ENST00000463005 PXDNLA1KZ92 1463 aa11.03□□□□□ -0.64
GARNL3-212ENST00000463005 WDR90Q96KV7 1748 aa11.03□□□□□ -0.64
GARNL3-212ENST00000463005 TULP1O00294 542 aaPredicted RBP11.02□□□□□ -0.65
GARNL3-212ENST00000463005 FCHSD2O94868 740 aa11.02□□□□□ -0.65
GARNL3-212ENST00000463005 PHKG2P15735 406 aa11.02□□□□□ -0.65
GARNL3-212ENST00000463005 FSTL1Q12841 308 aa11.02□□□□□ -0.65
GARNL3-212ENST00000463005 EYA1Q99502 592 aa11.02□□□□□ -0.65
GARNL3-212ENST00000463005 EMILIN1Q9Y6C2 1016 aa11.02□□□□□ -0.65
GARNL3-212ENST00000463005 PARP3Q9Y6F1 533 aa11.02□□□□□ -0.65
GARNL3-212ENST00000463005 PLEKHG2Q9H7P9 1386 aa11.02□□□□□ -0.65
GARNL3-212ENST00000463005 ERVV-2B6SEH9 535 aa11.01□□□□□ -0.65
GARNL3-212ENST00000463005 PPM1GO15355 546 aaPredicted RBP11.01□□□□□ -0.65
GARNL3-212ENST00000463005 RPS6KA4O75676 772 aa11.01□□□□□ -0.65
GARNL3-212ENST00000463005 DPEP1P16444 411 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms