RNA–Protein interactions for RNA: ENST00000462892.1

SEMA4A-209, Transcript of semaphorin 4A, human

TSL 3

Gene SEMA4A, Length 993 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4A-209	ENST00000462892	TAF7	Q15545	349 aa	Predicted RBP	33.32	■■■□□ 2.92
SEMA4A-209	ENST00000462892	DLG5	Q8TDM6	1919 aa		33.32	■■■□□ 2.92
SEMA4A-209	ENST00000462892	CANX	P27824	592 aa	Known RBP	33.31	■■■□□ 2.92
SEMA4A-209	ENST00000462892	WDR43	Q15061	677 aa	Known RBP eCLIP	33.3	■■■□□ 2.92
SEMA4A-209	ENST00000462892	COL15A1	P39059	1388 aa		33.29	■■■□□ 2.92
SEMA4A-209	ENST00000462892	FKBP8	Q14318	412 aa		33.28	■■■□□ 2.92
SEMA4A-209	ENST00000462892	GPR162	Q16538	588 aa		33.28	■■■□□ 2.92
SEMA4A-209	ENST00000462892	THUMPD2	Q9BTF0	503 aa	Known RBP	33.28	■■■□□ 2.92
SEMA4A-209	ENST00000462892	ZPR1	O75312	459 aa		33.27	■■■□□ 2.92
SEMA4A-209	ENST00000462892	MIS18A	Q9NYP9	233 aa		33.27	■■■□□ 2.92
SEMA4A-209	ENST00000462892	USPL1	Q5W0Q7	1092 aa		33.26	■■■□□ 2.91
SEMA4A-209	ENST00000462892	CCDC146	Q8IYE0	955 aa		33.26	■■■□□ 2.91
SEMA4A-209	ENST00000462892	PELP1	Q8IZL8	1130 aa	Known RBP	33.26	■■■□□ 2.91
SEMA4A-209	ENST00000462892	RIPK4	P57078	832 aa		33.25	■■■□□ 2.91
SEMA4A-209	ENST00000462892	NARF	Q9UHQ1	456 aa		33.25	■■■□□ 2.91
SEMA4A-209	ENST00000462892	ADAMTS8	Q9UP79	889 aa		33.25	■■■□□ 2.91
SEMA4A-209	ENST00000462892	PRAMEF22	A3QJZ6	481 aa		33.24	■■■□□ 2.91
SEMA4A-209	ENST00000462892	A1BG	P04217	495 aa		33.24	■■■□□ 2.91
SEMA4A-209	ENST00000462892	EIF5	P55010	431 aa	Known RBP	33.24	■■■□□ 2.91
SEMA4A-209	ENST00000462892	PNISR	Q8TF01	805 aa	Known RBP	33.24	■■■□□ 2.91
SEMA4A-209	ENST00000462892	USP16	Q9Y5T5	823 aa		33.24	■■■□□ 2.91
SEMA4A-209	ENST00000462892	SNRPA1	P09661	255 aa	Known RBP	33.23	■■■□□ 2.91
SEMA4A-209	ENST00000462892	TMPO	P42166	694 aa	Known RBP	33.23	■■■□□ 2.91
SEMA4A-209	ENST00000462892	PARP3	Q9Y6F1	533 aa		33.23	■■■□□ 2.91
SEMA4A-209	ENST00000462892	RUNDC1	Q96C34	613 aa		33.21	■■■□□ 2.91
SEMA4A-209	ENST00000462892	YY1	P25490	414 aa		33.2	■■■□□ 2.91
SEMA4A-209	ENST00000462892	RRP7A	Q9Y3A4	280 aa	Known RBP	33.2	■■■□□ 2.91
SEMA4A-209	ENST00000462892		A0A087WZG4	1122 aa		33.19	■■■□□ 2.9
SEMA4A-209	ENST00000462892	TM4SF1	P30408	202 aa		33.19	■■■□□ 2.9
SEMA4A-209	ENST00000462892	IL6ST	P40189	918 aa	Predicted RBP	33.19	■■■□□ 2.9
SEMA4A-209	ENST00000462892	DDR1	Q08345	913 aa		33.19	■■■□□ 2.9
SEMA4A-209	ENST00000462892	YBX3	P16989	372 aa	Known RBP eCLIP	33.18	■■■□□ 2.9
SEMA4A-209	ENST00000462892	BCL2L12	Q9HB09	334 aa		33.18	■■■□□ 2.9
SEMA4A-209	ENST00000462892	ZNF330	Q9Y3S2	320 aa	Predicted RBP	33.18	■■■□□ 2.9
SEMA4A-209	ENST00000462892	C10orf71	Q711Q0	1435 aa		33.17	■■■□□ 2.9
SEMA4A-209	ENST00000462892	LMOD3	Q0VAK6	560 aa		33.16	■■■□□ 2.9
SEMA4A-209	ENST00000462892	NEUROD2	Q15784	382 aa		33.16	■■■□□ 2.9
SEMA4A-209	ENST00000462892	KDM3B	Q7LBC6	1761 aa		33.16	■■■□□ 2.9
SEMA4A-209	ENST00000462892	POLRMT	O00411	1230 aa	Known RBP	33.14	■■■□□ 2.9
SEMA4A-209	ENST00000462892	PIP4K2A	P48426	406 aa	Predicted RBP	33.14	■■■□□ 2.9
SEMA4A-209	ENST00000462892	TBC1D2B	Q9UPU7	963 aa		33.14	■■■□□ 2.9
SEMA4A-209	ENST00000462892	EIF4A1	P60842	406 aa	Known RBP	33.13	■■■□□ 2.89
SEMA4A-209	ENST00000462892	NFIX	Q14938	502 aa		33.13	■■■□□ 2.89
SEMA4A-209	ENST00000462892	KIF13B	Q9NQT8	1826 aa		33.13	■■■□□ 2.89
SEMA4A-209	ENST00000462892	UTRN	P46939	3433 aa		33.12	■■■□□ 2.89
SEMA4A-209	ENST00000462892	NPM2	Q86SE8	214 aa	Known RBP	33.12	■■■□□ 2.89
SEMA4A-209	ENST00000462892	TGFB2	P61812	414 aa		33.11	■■■□□ 2.89
SEMA4A-209	ENST00000462892	CCDC184	Q52MB2	194 aa		33.11	■■■□□ 2.89
SEMA4A-209	ENST00000462892	WWC3	Q9ULE0	1092 aa		33.11	■■■□□ 2.89
SEMA4A-209	ENST00000462892	PXDNL	A1KZ92	1463 aa		33.11	■■■□□ 2.89
SEMA4A-209	ENST00000462892	GRIN3B	O60391	1043 aa		33.1	■■■□□ 2.89
SEMA4A-209	ENST00000462892	GIGYF1	O75420	1035 aa	Predicted RBP	33.1	■■■□□ 2.89
SEMA4A-209	ENST00000462892	TSPYL4	Q9UJ04	414 aa		33.1	■■■□□ 2.89
SEMA4A-209	ENST00000462892	TRIM35	Q9UPQ4	493 aa		33.09	■■■□□ 2.89
SEMA4A-209	ENST00000462892		A0A0G2JLW4	131 aa		33.08	■■■□□ 2.89
SEMA4A-209	ENST00000462892	NBPF26	B4DH59	902 aa		33.08	■■■□□ 2.89
SEMA4A-209	ENST00000462892	NBPF10	Q6P3W6	841 aa	Known RBP	33.08	■■■□□ 2.89
SEMA4A-209	ENST00000462892	NBPF15	Q8N660	670 aa		33.08	■■■□□ 2.89
SEMA4A-209	ENST00000462892	GOLGB1	Q14789	3259 aa	Known RBP	33.08	■■■□□ 2.89
SEMA4A-209	ENST00000462892	DZIP3	Q86Y13	1208 aa	Known RBP	33.07	■■■□□ 2.88
SEMA4A-209	ENST00000462892	KIAA1551	Q9HCM1	1747 aa		33.07	■■■□□ 2.88
SEMA4A-209	ENST00000462892	ANP32C	O43423	234 aa		33.06	■■■□□ 2.88
SEMA4A-209	ENST00000462892	CAMTA2	O94983	1202 aa		33.06	■■■□□ 2.88
SEMA4A-209	ENST00000462892	BABAM1	Q9NWV8	329 aa		33.06	■■■□□ 2.88
SEMA4A-209	ENST00000462892	SCN7A	Q01118	1682 aa		33.05	■■■□□ 2.88
SEMA4A-209	ENST00000462892	DPEP1	P16444	411 aa		33.05	■■■□□ 2.88
SEMA4A-209	ENST00000462892	BICDL1	Q6ZP65	573 aa		33.05	■■■□□ 2.88
SEMA4A-209	ENST00000462892	SERPINB2	P05120	415 aa		33.04	■■■□□ 2.88
SEMA4A-209	ENST00000462892	TBC1D9B	Q66K14	1250 aa		33.04	■■■□□ 2.88
SEMA4A-209	ENST00000462892	LAMB4	A4D0S4	1761 aa		33.04	■■■□□ 2.88
SEMA4A-209	ENST00000462892	N4BP2	Q86UW6	1770 aa	Predicted RBP	33.03	■■■□□ 2.88
SEMA4A-209	ENST00000462892	APAF1	O14727	1248 aa		33.01	■■■□□ 2.87
SEMA4A-209	ENST00000462892	CHD4	Q14839	1912 aa		32.99	■■■□□ 2.87
SEMA4A-209	ENST00000462892	KCNA3	P22001	575 aa		32.99	■■■□□ 2.87
SEMA4A-209	ENST00000462892	NRXN2	Q9P2S2	1712 aa		32.99	■■■□□ 2.87
SEMA4A-209	ENST00000462892	CHL1	O00533	1208 aa		32.98	■■■□□ 2.87
SEMA4A-209	ENST00000462892	LAS1L	Q9Y4W2	734 aa	Known RBP	32.98	■■■□□ 2.87
SEMA4A-209	ENST00000462892	AFDN	P55196	1824 aa	Known RBP	32.98	■■■□□ 2.87
SEMA4A-209	ENST00000462892	BCOR	Q6W2J9	1755 aa		32.97	■■■□□ 2.87
SEMA4A-209	ENST00000462892	CHRNA5	P30532	468 aa		32.96	■■■□□ 2.87
SEMA4A-209	ENST00000462892	MRS2	Q9HD23	443 aa		32.96	■■■□□ 2.87
SEMA4A-209	ENST00000462892	BCS1L	Q9Y276	419 aa		32.96	■■■□□ 2.87
SEMA4A-209	ENST00000462892	SETDB2	Q96T68	719 aa		32.95	■■■□□ 2.87
SEMA4A-209	ENST00000462892	CARMIL3	Q8ND23	1372 aa		32.95	■■■□□ 2.86
SEMA4A-209	ENST00000462892	CLEC4G	Q6UXB4	293 aa		32.94	■■■□□ 2.86
SEMA4A-209	ENST00000462892	NGEF	Q8N5V2	710 aa		32.94	■■■□□ 2.86
SEMA4A-209	ENST00000462892	MYL6B	P14649	208 aa		32.93	■■■□□ 2.86
SEMA4A-209	ENST00000462892	PIM2	Q9P1W9	311 aa		32.93	■■■□□ 2.86
SEMA4A-209	ENST00000462892	ZNF652	Q9Y2D9	606 aa		32.93	■■■□□ 2.86
SEMA4A-209	ENST00000462892	EIF2S2	P20042	333 aa	Known RBP	32.91	■■■□□ 2.86
SEMA4A-209	ENST00000462892	ERBB4	Q15303	1308 aa		32.91	■■■□□ 2.86
SEMA4A-209	ENST00000462892	RGL2	O15211	777 aa		32.9	■■■□□ 2.86
SEMA4A-209	ENST00000462892	CFAP44	Q96MT7	982 aa		32.9	■■■□□ 2.86
SEMA4A-209	ENST00000462892	BRCA1	P38398	1863 aa	Known RBP	32.89	■■■□□ 2.86
SEMA4A-209	ENST00000462892	KRT24	Q2M2I5	525 aa		32.89	■■■□□ 2.86
SEMA4A-209	ENST00000462892	PRR5L	Q6MZQ0	368 aa		32.89	■■■□□ 2.86
SEMA4A-209	ENST00000462892	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.89	■■■□□ 2.86
SEMA4A-209	ENST00000462892	HLF	Q16534	295 aa		32.88	■■■□□ 2.85
SEMA4A-209	ENST00000462892	CCDC24	Q8N4L8	307 aa		32.88	■■■□□ 2.85
SEMA4A-209	ENST00000462892	DALRD3	Q5D0E6	543 aa	Known RBP	32.87	■■■□□ 2.85

Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms