RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 VSIG10Q8N0Z9 540 aa22.98■■□□□ 1.27
ATPAF2-202ENST00000462733 LY75O60449 1722 aa22.98■■□□□ 1.27
ATPAF2-202ENST00000462733 SOS1Q07889 1333 aaPredicted RBP22.97■■□□□ 1.27
ATPAF2-202ENST00000462733 BCL2L13Q9BXK5 485 aa22.96■■□□□ 1.27
ATPAF2-202ENST00000462733 CCNL1Q9UK58 526 aaPredicted RBP22.96■■□□□ 1.27
ATPAF2-202ENST00000462733 PLIN1O60240 522 aa22.96■■□□□ 1.27
ATPAF2-202ENST00000462733 SF3B2Q13435 895 aaKnown RBP22.96■■□□□ 1.27
ATPAF2-202ENST00000462733 LAMB4A4D0S4 1761 aa22.96■■□□□ 1.27
ATPAF2-202ENST00000462733 TJP1Q07157 1748 aa22.96■■□□□ 1.27
ATPAF2-202ENST00000462733 RARSP54136 660 aaKnown RBP22.95■■□□□ 1.26
ATPAF2-202ENST00000462733 ITPK1Q13572 414 aa22.95■■□□□ 1.26
ATPAF2-202ENST00000462733 IPO9Q96P70 1041 aaKnown RBP22.95■■□□□ 1.26
ATPAF2-202ENST00000462733 CCDC30Q5VVM6 783 aa22.94■■□□□ 1.26
ATPAF2-202ENST00000462733 TEX13AQ9BXU3 409 aaPredicted RBP22.94■■□□□ 1.26
ATPAF2-202ENST00000462733 SSH1Q8WYL5 1049 aa22.94■■□□□ 1.26
ATPAF2-202ENST00000462733 PLSCR1O15162 318 aa22.93■■□□□ 1.26
ATPAF2-202ENST00000462733 STARD3NLO95772 234 aa22.93■■□□□ 1.26
ATPAF2-202ENST00000462733 ZNF428Q96B54 188 aa22.93■■□□□ 1.26
ATPAF2-202ENST00000462733 SMC4Q9NTJ3 1288 aa22.93■■□□□ 1.26
ATPAF2-202ENST00000462733 KDM2BQ8NHM5 1336 aa22.92■■□□□ 1.26
ATPAF2-202ENST00000462733 BCAR3O75815 825 aa22.92■■□□□ 1.26
ATPAF2-202ENST00000462733 ILDR2Q71H61 639 aa22.92■■□□□ 1.26
ATPAF2-202ENST00000462733 CYP19A1P11511 503 aaPredicted RBP22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 PIP4K2AP48426 406 aaPredicted RBP22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 TXNRD1Q16881 649 aa22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 CENPQQ7L2Z9 268 aaPredicted RBP22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 STK31Q9BXU1 1019 aa22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 CHPF2Q9P2E5 772 aa22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 ZNF831Q5JPB2 1677 aa22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 ANXA1P04083 346 aa22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 A1BGP04217 495 aa22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 EN1Q05925 392 aaPredicted RBP22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 ALDH1L2Q3SY69 923 aa22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 LINC00116Q8NCU8 138 aa22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 CHMP4AQ9BY43 222 aa22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 LRRC4BQ9NT99 713 aa22.91■■□□□ 1.26
ATPAF2-202ENST00000462733 PROM2Q8N271 834 aa22.9■■□□□ 1.26
ATPAF2-202ENST00000462733 TAF1LQ8IZX4 1826 aa22.89■■□□□ 1.26
ATPAF2-202ENST00000462733 SLC4A2P04920 1241 aa22.89■■□□□ 1.26
ATPAF2-202ENST00000462733 SLC27A3Q5K4L6 730 aa22.89■■□□□ 1.26
ATPAF2-202ENST00000462733 DEFB132Q7Z7B7 95 aa22.89■■□□□ 1.26
ATPAF2-202ENST00000462733 BACH2Q9BYV9 841 aa22.89■■□□□ 1.26
ATPAF2-202ENST00000462733 COL5A3P25940 1745 aaPredicted RBP22.89■■□□□ 1.25
ATPAF2-202ENST00000462733 CICQ96RK0 1608 aaPredicted RBP22.88■■□□□ 1.25
ATPAF2-202ENST00000462733 MYL6BP14649 208 aa22.88■■□□□ 1.25
ATPAF2-202ENST00000462733 PDE4AP27815 886 aa22.88■■□□□ 1.25
ATPAF2-202ENST00000462733 BAG6P46379 1132 aa22.88■■□□□ 1.25
ATPAF2-202ENST00000462733 PROSER3Q2NL68 480 aa22.88■■□□□ 1.25
ATPAF2-202ENST00000462733 MRPL50Q8N5N7 158 aaKnown RBP22.88■■□□□ 1.25
ATPAF2-202ENST00000462733 DBF4Q9UBU7 674 aaPredicted RBP22.88■■□□□ 1.25
ATPAF2-202ENST00000462733 CACNA1FO60840 1977 aa22.88■■□□□ 1.25
ATPAF2-202ENST00000462733 C20orf194Q5TEA3 1177 aa22.88■■□□□ 1.25
ATPAF2-202ENST00000462733 MYH14Q7Z406 1995 aaKnown RBP22.88■■□□□ 1.25
ATPAF2-202ENST00000462733 CRKLP46109 303 aaKnown RBP22.87■■□□□ 1.25
ATPAF2-202ENST00000462733 PDIA6Q15084 440 aa22.87■■□□□ 1.25
ATPAF2-202ENST00000462733 EZH2Q15910 746 aaKnown RBP22.87■■□□□ 1.25
ATPAF2-202ENST00000462733 CCDC125Q86Z20 511 aa22.87■■□□□ 1.25
ATPAF2-202ENST00000462733 RGPD3A6NKT7 1758 aaPredicted RBP22.87■■□□□ 1.25
ATPAF2-202ENST00000462733 RGPD4Q7Z3J3 1758 aa22.87■■□□□ 1.25
ATPAF2-202ENST00000462733 NBPF26B4DH59 902 aa22.86■■□□□ 1.25
ATPAF2-202ENST00000462733 CANXP27824 592 aaKnown RBP22.86■■□□□ 1.25
ATPAF2-202ENST00000462733 NBPF14Q5TI25 921 aa22.86■■□□□ 1.25
ATPAF2-202ENST00000462733 NBPF10Q6P3W6 841 aaKnown RBP22.86■■□□□ 1.25
ATPAF2-202ENST00000462733 NBPF15Q8N660 670 aa22.86■■□□□ 1.25
ATPAF2-202ENST00000462733 DDX21Q9NR30 783 aaKnown RBP eCLIP22.86■■□□□ 1.25
ATPAF2-202ENST00000462733 ZBTB1Q9Y2K1 713 aa22.86■■□□□ 1.25
ATPAF2-202ENST00000462733 CAMKK2Q96RR4 588 aa22.85■■□□□ 1.25
ATPAF2-202ENST00000462733 CCDC87Q9NVE4 849 aa22.85■■□□□ 1.25
ATPAF2-202ENST00000462733 INTS5Q6P9B9 1019 aaKnown RBP22.85■■□□□ 1.25
ATPAF2-202ENST00000462733 G2E3Q7L622 706 aa22.85■■□□□ 1.25
ATPAF2-202ENST00000462733 UPF1Q92900 1129 aaKnown RBP eCLIP22.85■■□□□ 1.25
ATPAF2-202ENST00000462733 ZNF330Q9Y3S2 320 aaPredicted RBP22.85■■□□□ 1.25
ATPAF2-202ENST00000462733 ERBB4Q15303 1308 aa22.85■■□□□ 1.25
ATPAF2-202ENST00000462733 FRAT1Q92837 279 aaPredicted RBP22.84■■□□□ 1.25
ATPAF2-202ENST00000462733 PHAXQ9H814 394 aaKnown RBP22.84■■□□□ 1.25
ATPAF2-202ENST00000462733 NOB1Q9ULX3 412 aaKnown RBP22.83■■□□□ 1.25
ATPAF2-202ENST00000462733 C4BP0C0L5 1744 aa22.83■■□□□ 1.24
ATPAF2-202ENST00000462733 HYPKQ9NX55 129 aa22.82■■□□□ 1.24
ATPAF2-202ENST00000462733 AIMP1Q12904 312 aaKnown RBP22.82■■□□□ 1.24
ATPAF2-202ENST00000462733 PDE3AQ14432 1141 aa22.82■■□□□ 1.24
ATPAF2-202ENST00000462733 ZBTB47Q9UFB7 747 aaPredicted RBP22.82■■□□□ 1.24
ATPAF2-202ENST00000462733 CNTNAP4Q9C0A0 1308 aa22.82■■□□□ 1.24
ATPAF2-202ENST00000462733 FLIIQ13045 1269 aa22.81■■□□□ 1.24
ATPAF2-202ENST00000462733 KIF16BQ96L93 1317 aa22.8■■□□□ 1.24
ATPAF2-202ENST00000462733 BRPF1P55201 1214 aaPredicted RBP22.8■■□□□ 1.24
ATPAF2-202ENST00000462733 RC3H1Q5TC82 1133 aaKnown RBP22.8■■□□□ 1.24
ATPAF2-202ENST00000462733 LRP10Q7Z4F1 713 aa22.8■■□□□ 1.24
ATPAF2-202ENST00000462733 AK7Q96M32 723 aa22.8■■□□□ 1.24
ATPAF2-202ENST00000462733 RREB1Q92766 1687 aa22.8■■□□□ 1.24
ATPAF2-202ENST00000462733 GNPATO15228 680 aa22.79■■□□□ 1.24
ATPAF2-202ENST00000462733 XAGE3Q8WTP9 111 aa22.79■■□□□ 1.24
ATPAF2-202ENST00000462733 AAMPQ13685 434 aa22.79■■□□□ 1.24
ATPAF2-202ENST00000462733 COPS6Q7L5N1 327 aa22.79■■□□□ 1.24
ATPAF2-202ENST00000462733 ARXQ96QS3 562 aa22.79■■□□□ 1.24
ATPAF2-202ENST00000462733 IL6STP40189 918 aaPredicted RBP22.78■■□□□ 1.24
ATPAF2-202ENST00000462733 FKBP5Q13451 457 aaPredicted RBP22.78■■□□□ 1.24
ATPAF2-202ENST00000462733 SMIM5Q71RC9 77 aa22.78■■□□□ 1.24
ATPAF2-202ENST00000462733 NPM2Q86SE8 214 aaKnown RBP22.78■■□□□ 1.24
ATPAF2-202ENST00000462733 HMGB2P26583 209 aaKnown RBP22.77■■□□□ 1.23
ATPAF2-202ENST00000462733 ZKSCAN2Q63HK3 967 aa22.77■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms