RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 OVOS2Q6IE36 1432 aa7.23□□□□□ -1.25
PDCD4-204ENST00000462577 CDK12Q9NYV4 1490 aaPredicted RBP7.23□□□□□ -1.25
PDCD4-204ENST00000462577 CPDO75976 1380 aa7.22□□□□□ -1.25
PDCD4-204ENST00000462577 SHANK3Q9BYB0 1731 aa7.22□□□□□ -1.25
PDCD4-204ENST00000462577 IRF6O14896 467 aa7.22□□□□□ -1.25
PDCD4-204ENST00000462577 SLC10A3P09131 477 aa7.22□□□□□ -1.25
PDCD4-204ENST00000462577 TJAP1Q5JTD0 557 aa7.22□□□□□ -1.25
PDCD4-204ENST00000462577 IFFO2Q5TF58 517 aa7.22□□□□□ -1.25
PDCD4-204ENST00000462577 NECTIN2Q92692 538 aa7.22□□□□□ -1.25
PDCD4-204ENST00000462577 TERF2IPQ9NYB0 399 aa7.22□□□□□ -1.25
PDCD4-204ENST00000462577 MTRQ99707 1265 aa7.21□□□□□ -1.26
PDCD4-204ENST00000462577 BCL9LQ86UU0 1499 aa7.21□□□□□ -1.26
PDCD4-204ENST00000462577 TTC21BQ7Z4L5 1316 aa7.21□□□□□ -1.26
PDCD4-204ENST00000462577 LRRC37A3O60309 1634 aa7.2□□□□□ -1.26
PDCD4-204ENST00000462577 ATRNO75882 1429 aa7.2□□□□□ -1.26
PDCD4-204ENST00000462577 HDGFL2Q7Z4V5 671 aaPredicted RBP7.2□□□□□ -1.26
PDCD4-204ENST00000462577 ZC3H15Q8WU90 426 aaKnown RBP7.2□□□□□ -1.26
PDCD4-204ENST00000462577 SLC12A5Q9H2X9 1139 aa7.2□□□□□ -1.26
PDCD4-204ENST00000462577 DAXXQ9UER7 740 aaPredicted RBP7.2□□□□□ -1.26
PDCD4-204ENST00000462577 RGPD1P0DJD0 1748 aa7.2□□□□□ -1.26
PDCD4-204ENST00000462577 PKD1L3Q7Z443 1732 aa7.19□□□□□ -1.26
PDCD4-204ENST00000462577 CFHP08603 1231 aa7.19□□□□□ -1.26
PDCD4-204ENST00000462577 ZEB1P37275 1124 aaPredicted RBP7.19□□□□□ -1.26
PDCD4-204ENST00000462577 NLRP13Q86W25 1043 aa7.19□□□□□ -1.26
PDCD4-204ENST00000462577 FNBP4Q8N3X1 1017 aaPredicted RBP7.19□□□□□ -1.26
PDCD4-204ENST00000462577 ZNF516Q92618 1163 aa7.19□□□□□ -1.26
PDCD4-204ENST00000462577 RGS17Q9UGC6 210 aaPredicted RBP7.19□□□□□ -1.26
PDCD4-204ENST00000462577 NSD2O96028 1365 aa7.19□□□□□ -1.26
PDCD4-204ENST00000462577 CCDC7Q96M83 1385 aa7.19□□□□□ -1.26
PDCD4-204ENST00000462577 TNS1Q9HBL0 1735 aaKnown RBP7.18□□□□□ -1.26
PDCD4-204ENST00000462577 COL5A2P05997 1499 aaPredicted RBP7.18□□□□□ -1.26
PDCD4-204ENST00000462577 RGPD3A6NKT7 1758 aaPredicted RBP7.18□□□□□ -1.26
PDCD4-204ENST00000462577 RGPD4Q7Z3J3 1758 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 A0A0G2JS52 829 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 NUTM2BA6NNL0 878 aaPredicted RBP7.18□□□□□ -1.26
PDCD4-204ENST00000462577 DDX11L8A8MPP1 907 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 NUTM2EB1AL46 878 aaPredicted RBP7.18□□□□□ -1.26
PDCD4-204ENST00000462577 COPS2P61201 443 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 MEX3CQ5U5Q3 659 aaKnown RBP7.18□□□□□ -1.26
PDCD4-204ENST00000462577 ZNF772Q68DY9 489 aaPredicted RBP7.18□□□□□ -1.26
PDCD4-204ENST00000462577 NUTM2AQ8IVF1 878 aaPredicted RBP7.18□□□□□ -1.26
PDCD4-204ENST00000462577 ABTB2Q8N961 1025 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 KRI1Q8N9T8 703 aaKnown RBP7.18□□□□□ -1.26
PDCD4-204ENST00000462577 TMC1Q8TDI8 760 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 CCDC102AQ96A19 550 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 IL21Q9HBE4 155 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 AFF2P51816 1311 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 KIF7Q2M1P5 1343 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 AATKQ6ZMQ8 1374 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 NSD3Q9BZ95 1437 aa7.18□□□□□ -1.26
PDCD4-204ENST00000462577 C11orf95C9JLR9 678 aaPredicted RBP7.17□□□□□ -1.26
PDCD4-204ENST00000462577 ZMYND10O75800 440 aa7.17□□□□□ -1.26
PDCD4-204ENST00000462577 KMT5BQ4FZB7 885 aa7.17□□□□□ -1.26
PDCD4-204ENST00000462577 RDH13Q8NBN7 331 aa7.17□□□□□ -1.26
PDCD4-204ENST00000462577 PRR14Q9BWN1 585 aa7.17□□□□□ -1.26
PDCD4-204ENST00000462577 PCDHB3Q9Y5E6 796 aa7.17□□□□□ -1.26
PDCD4-204ENST00000462577 KIAA0232Q92628 1395 aa7.17□□□□□ -1.26
PDCD4-204ENST00000462577 ACTN4O43707 911 aaKnown RBP7.16□□□□□ -1.26
PDCD4-204ENST00000462577 ADAMTS2O95450 1211 aa7.16□□□□□ -1.26
PDCD4-204ENST00000462577 BLOC1S3Q6QNY0 202 aa7.16□□□□□ -1.26
PDCD4-204ENST00000462577 BARGINQ6ZT62 677 aa7.16□□□□□ -1.26
PDCD4-204ENST00000462577 KCNH5Q8NCM2 988 aa7.16□□□□□ -1.26
PDCD4-204ENST00000462577 CABLES1Q8TDN4 633 aa7.16□□□□□ -1.26
PDCD4-204ENST00000462577 RTL1A6NKG5 1358 aa7.16□□□□□ -1.26
PDCD4-204ENST00000462577 KIF24Q5T7B8 1368 aa7.16□□□□□ -1.26
PDCD4-204ENST00000462577 BLMP54132 1417 aaPredicted RBP7.16□□□□□ -1.26
PDCD4-204ENST00000462577 SMG6Q86US8 1419 aaKnown RBP7.16□□□□□ -1.26
PDCD4-204ENST00000462577 ITGB4P16144 1822 aa7.15□□□□□ -1.26
PDCD4-204ENST00000462577 GCP02774 474 aa7.15□□□□□ -1.26
PDCD4-204ENST00000462577 MDM2Q00987 491 aaPredicted RBP7.15□□□□□ -1.26
PDCD4-204ENST00000462577 NME9Q86XW9 330 aa7.15□□□□□ -1.26
PDCD4-204ENST00000462577 NKX2-3Q8TAU0 364 aa7.15□□□□□ -1.26
PDCD4-204ENST00000462577 NGLY1Q96IV0 654 aa7.15□□□□□ -1.26
PDCD4-204ENST00000462577 C8orf37Q96NL8 207 aa7.15□□□□□ -1.26
PDCD4-204ENST00000462577 CARD14Q9BXL6 1004 aa7.15□□□□□ -1.26
PDCD4-204ENST00000462577 WASHC2AQ641Q2 1341 aa7.15□□□□□ -1.26
PDCD4-204ENST00000462577 NPC1L1Q9UHC9 1359 aa7.15□□□□□ -1.26
PDCD4-204ENST00000462577 RGS12O14924 1447 aa7.15□□□□□ -1.27
PDCD4-204ENST00000462577 FAM83GA6ND36 823 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 FYB1O15117 783 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 CRB1P82279 1406 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 CGNL1Q0VF96 1302 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 POTEAQ6S8J7 498 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 NHSQ6T4R5 1651 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 ARHGEF25Q86VW2 580 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 UNC5CLQ8IV45 518 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 DLG5Q8TDM6 1919 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 DOT1LQ8TEK3 1739 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 USP21Q9UK80 565 aa7.14□□□□□ -1.27
PDCD4-204ENST00000462577 TRPC5Q9UL62 973 aaPredicted RBP7.14□□□□□ -1.27
PDCD4-204ENST00000462577 SCN11AQ9UI33 1791 aa7.13□□□□□ -1.27
PDCD4-204ENST00000462577 RREB1Q92766 1687 aa7.13□□□□□ -1.27
PDCD4-204ENST00000462577 NCAPD2Q15021 1401 aa7.13□□□□□ -1.27
PDCD4-204ENST00000462577 ZPR1O75312 459 aa7.13□□□□□ -1.27
PDCD4-204ENST00000462577 RBM6P78332 1123 aaKnown RBP7.13□□□□□ -1.27
PDCD4-204ENST00000462577 VPS72Q15906 364 aa7.13□□□□□ -1.27
PDCD4-204ENST00000462577 PUS10Q3MIT2 529 aaKnown RBP7.13□□□□□ -1.27
PDCD4-204ENST00000462577 NUTM2GQ5VZR2 741 aa7.13□□□□□ -1.27
PDCD4-204ENST00000462577 SULF1Q8IWU6 871 aa7.13□□□□□ -1.27
PDCD4-204ENST00000462577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms