RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 CEMIPQ8WUJ3 1361 aa11.71□□□□□ -0.53
DDX39B-216ENST00000462421 USP42Q9H9J4 1324 aaKnown RBP11.71□□□□□ -0.53
DDX39B-216ENST00000462421 RUNDC1Q96C34 613 aa11.71□□□□□ -0.53
DDX39B-216ENST00000462421 ZNF496Q96IT1 587 aaPredicted RBP11.71□□□□□ -0.53
DDX39B-216ENST00000462421 SLC4A9Q96Q91 983 aa11.71□□□□□ -0.53
DDX39B-216ENST00000462421 TSPYL4Q9UJ04 414 aa11.71□□□□□ -0.53
DDX39B-216ENST00000462421 SOS1Q07889 1333 aaPredicted RBP11.7□□□□□ -0.54
DDX39B-216ENST00000462421 DCTN1Q14203 1278 aa11.7□□□□□ -0.54
DDX39B-216ENST00000462421 USPL1Q5W0Q7 1092 aa11.7□□□□□ -0.54
DDX39B-216ENST00000462421 ZBTB1Q9Y2K1 713 aa11.7□□□□□ -0.54
DDX39B-216ENST00000462421 TAF1LQ8IZX4 1826 aa11.7□□□□□ -0.54
DDX39B-216ENST00000462421 GYS1P13807 737 aa11.69□□□□□ -0.54
DDX39B-216ENST00000462421 IL6STP40189 918 aaPredicted RBP11.69□□□□□ -0.54
DDX39B-216ENST00000462421 TGFB2P61812 414 aa11.69□□□□□ -0.54
DDX39B-216ENST00000462421 INTS5Q6P9B9 1019 aaKnown RBP11.69□□□□□ -0.54
DDX39B-216ENST00000462421 KIF6Q6ZMV9 814 aa11.69□□□□□ -0.54
DDX39B-216ENST00000462421 SMIM5Q71RC9 77 aa11.69□□□□□ -0.54
DDX39B-216ENST00000462421 CCDC146Q8IYE0 955 aa11.69□□□□□ -0.54
DDX39B-216ENST00000462421 NARFQ9UHQ1 456 aa11.69□□□□□ -0.54
DDX39B-216ENST00000462421 LAS1LQ9Y4W2 734 aaKnown RBP11.69□□□□□ -0.54
DDX39B-216ENST00000462421 TUBGCP6Q96RT7 1819 aa11.68□□□□□ -0.54
DDX39B-216ENST00000462421 ST5P78524 1137 aa11.68□□□□□ -0.54
DDX39B-216ENST00000462421 BICDL1Q6ZP65 573 aa11.68□□□□□ -0.54
DDX39B-216ENST00000462421 NLGN2Q8NFZ4 835 aa11.68□□□□□ -0.54
DDX39B-216ENST00000462421 CHMP4AQ9BY43 222 aa11.68□□□□□ -0.54
DDX39B-216ENST00000462421 SRP68Q9UHB9 627 aaKnown RBP11.68□□□□□ -0.54
DDX39B-216ENST00000462421 KCPQ6ZWJ8 1503 aa11.67□□□□□ -0.54
DDX39B-216ENST00000462421 GTF2E1P29083 439 aaPredicted RBP11.67□□□□□ -0.54
DDX39B-216ENST00000462421 DZIP3Q86Y13 1208 aaKnown RBP11.67□□□□□ -0.54
DDX39B-216ENST00000462421 PLEKHF1Q96S99 279 aa11.67□□□□□ -0.54
DDX39B-216ENST00000462421 SETDB2Q96T68 719 aa11.67□□□□□ -0.54
DDX39B-216ENST00000462421 BABAM1Q9NWV8 329 aa11.67□□□□□ -0.54
DDX39B-216ENST00000462421 UBR3Q6ZT12 1888 aa11.67□□□□□ -0.54
DDX39B-216ENST00000462421 TMPOP42166 694 aaKnown RBP11.66□□□□□ -0.54
DDX39B-216ENST00000462421 FKBP8Q14318 412 aa11.66□□□□□ -0.54
DDX39B-216ENST00000462421 AMIGO3Q86WK7 504 aa11.66□□□□□ -0.54
DDX39B-216ENST00000462421 MRS2Q9HD23 443 aa11.66□□□□□ -0.54
DDX39B-216ENST00000462421 PDZRN3Q9UPQ7 1066 aa11.66□□□□□ -0.54
DDX39B-216ENST00000462421 BCS1LQ9Y276 419 aa11.66□□□□□ -0.54
DDX39B-216ENST00000462421 CICQ96RK0 1608 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-216ENST00000462421 PIM2Q9P1W9 311 aa11.65□□□□□ -0.54
DDX39B-216ENST00000462421 WWC3Q9ULE0 1092 aa11.65□□□□□ -0.54
DDX39B-216ENST00000462421 ADAMTS8Q9UP79 889 aa11.65□□□□□ -0.54
DDX39B-216ENST00000462421 TBC1D2BQ9UPU7 963 aa11.65□□□□□ -0.54
DDX39B-216ENST00000462421 RRP7AQ9Y3A4 280 aaKnown RBP11.65□□□□□ -0.54
DDX39B-216ENST00000462421 COL5A3P25940 1745 aaPredicted RBP11.65□□□□□ -0.54
DDX39B-216ENST00000462421 CARMIL3Q8ND23 1372 aa11.65□□□□□ -0.55
DDX39B-216ENST00000462421 ADAMTS7Q9UKP4 1686 aa11.65□□□□□ -0.55
DDX39B-216ENST00000462421 A1BGP04217 495 aa11.64□□□□□ -0.55
DDX39B-216ENST00000462421 EIF5P55010 431 aaKnown RBP11.64□□□□□ -0.55
DDX39B-216ENST00000462421 CNBD1Q8NA66 436 aa11.64□□□□□ -0.55
DDX39B-216ENST00000462421 MIS18AQ9NYP9 233 aa11.64□□□□□ -0.55
DDX39B-216ENST00000462421 TJP1Q07157 1748 aa11.63□□□□□ -0.55
DDX39B-216ENST00000462421 H0YIN7 160 aa11.63□□□□□ -0.55
DDX39B-216ENST00000462421 KCNQ3O43525 872 aa11.63□□□□□ -0.55
DDX39B-216ENST00000462421 SERPINB2P05120 415 aa11.63□□□□□ -0.55
DDX39B-216ENST00000462421 EIF2S2P20042 333 aaKnown RBP11.63□□□□□ -0.55
DDX39B-216ENST00000462421 PDE6BP35913 854 aa11.63□□□□□ -0.55
DDX39B-216ENST00000462421 DALRD3Q5D0E6 543 aaKnown RBP11.63□□□□□ -0.55
DDX39B-216ENST00000462421 NBPF5PQ86XG9 351 aaPredicted RBP11.63□□□□□ -0.55
DDX39B-216ENST00000462421 NGEFQ8N5V2 710 aa11.63□□□□□ -0.55
DDX39B-216ENST00000462421 THUMPD2Q9BTF0 503 aaKnown RBP11.63□□□□□ -0.55
DDX39B-216ENST00000462421 ERBB4Q15303 1308 aa11.62□□□□□ -0.55
DDX39B-216ENST00000462421 C10orf71Q711Q0 1435 aa11.62□□□□□ -0.55
DDX39B-216ENST00000462421 POLRMTO00411 1230 aaKnown RBP11.62□□□□□ -0.55
DDX39B-216ENST00000462421 MYL6BP14649 208 aa11.62□□□□□ -0.55
DDX39B-216ENST00000462421 NFIXQ14938 502 aa11.62□□□□□ -0.55
DDX39B-216ENST00000462421 CLEC4GQ6UXB4 293 aa11.62□□□□□ -0.55
DDX39B-216ENST00000462421 TMX4Q9H1E5 349 aaPredicted RBP11.62□□□□□ -0.55
DDX39B-216ENST00000462421 A0A0G2JLW4 131 aa11.61□□□□□ -0.55
DDX39B-216ENST00000462421 DPEP1P16444 411 aa11.61□□□□□ -0.55
DDX39B-216ENST00000462421 EIF4A1P60842 406 aaKnown RBP11.61□□□□□ -0.55
DDX39B-216ENST00000462421 GNAI1P63096 354 aa11.61□□□□□ -0.55
DDX39B-216ENST00000462421 TPTE2Q6XPS3 522 aa11.61□□□□□ -0.55
DDX39B-216ENST00000462421 ARHGAP27Q6ZUM4 889 aa11.61□□□□□ -0.55
DDX39B-216ENST00000462421 NYXQ9GZU5 481 aa11.61□□□□□ -0.55
DDX39B-216ENST00000462421 USP16Q9Y5T5 823 aa11.61□□□□□ -0.55
DDX39B-216ENST00000462421 C4AP0C0L4 1744 aa11.6□□□□□ -0.55
DDX39B-216ENST00000462421 UBR2Q8IWV8 1755 aa11.6□□□□□ -0.55
DDX39B-216ENST00000462421 GIGYF1O75420 1035 aaPredicted RBP11.6□□□□□ -0.55
DDX39B-216ENST00000462421 C2CD5Q86YS7 1000 aa11.6□□□□□ -0.55
DDX39B-216ENST00000462421 ZNF622Q969S3 477 aaKnown RBP eCLIP11.6□□□□□ -0.55
DDX39B-216ENST00000462421 NIP7Q9Y221 180 aaKnown RBP eCLIP11.6□□□□□ -0.55
DDX39B-216ENST00000462421 APAF1O14727 1248 aa11.59□□□□□ -0.55
DDX39B-216ENST00000462421 RGL2O15211 777 aa11.59□□□□□ -0.55
DDX39B-216ENST00000462421 YBX3P16989 372 aaKnown RBP eCLIP11.59□□□□□ -0.55
DDX39B-216ENST00000462421 TM4SF1P30408 202 aa11.59□□□□□ -0.55
DDX39B-216ENST00000462421 PIP4K2AP48426 406 aaPredicted RBP11.59□□□□□ -0.55
DDX39B-216ENST00000462421 DDR1Q08345 913 aa11.59□□□□□ -0.55
DDX39B-216ENST00000462421 HSP90AB3PQ58FF7 597 aa11.59□□□□□ -0.55
DDX39B-216ENST00000462421 TBC1D9BQ66K14 1250 aa11.59□□□□□ -0.55
DDX39B-216ENST00000462421 VIRMAQ69YN4 1812 aaKnown RBP11.58□□□□□ -0.56
DDX39B-216ENST00000462421 PXDNLA1KZ92 1463 aa11.58□□□□□ -0.56
DDX39B-216ENST00000462421 COL24A1Q17RW2 1714 aa11.58□□□□□ -0.56
DDX39B-216ENST00000462421 FAM177BA6PVY3 158 aa11.58□□□□□ -0.56
DDX39B-216ENST00000462421 CAMTA2O94983 1202 aa11.58□□□□□ -0.56
DDX39B-216ENST00000462421 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
DDX39B-216ENST00000462421 HDGFL1Q5TGJ6 251 aa11.58□□□□□ -0.56
DDX39B-216ENST00000462421 TTLL6Q8N841 843 aa11.58□□□□□ -0.56
DDX39B-216ENST00000462421 CFAP44Q96MT7 982 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms