RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 LAMC1P11047 1609 aa8.47□□□□□ -1.05
VPS36-202ENST00000462289 PIK3R4Q99570 1358 aa8.47□□□□□ -1.05
VPS36-202ENST00000462289 PIK3C2GO75747 1445 aa8.46□□□□□ -1.05
VPS36-202ENST00000462289 KIAA1210Q9ULL0 1709 aa8.46□□□□□ -1.05
VPS36-202ENST00000462289 CPS1P31327 1500 aa8.46□□□□□ -1.05
VPS36-202ENST00000462289 PLEKHG3A1L390 1219 aa8.46□□□□□ -1.06
VPS36-202ENST00000462289 CTHP32929 405 aa8.46□□□□□ -1.06
VPS36-202ENST00000462289 QPCTQ16769 361 aa8.46□□□□□ -1.06
VPS36-202ENST00000462289 KNDC1Q76NI1 1749 aa8.46□□□□□ -1.06
VPS36-202ENST00000462289 ASXL1Q8IXJ9 1541 aa8.45□□□□□ -1.06
VPS36-202ENST00000462289 ALKQ9UM73 1620 aa8.45□□□□□ -1.06
VPS36-202ENST00000462289 PER1O15534 1290 aaPredicted RBP8.45□□□□□ -1.06
VPS36-202ENST00000462289 WFS1O76024 890 aa8.45□□□□□ -1.06
VPS36-202ENST00000462289 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.45□□□□□ -1.06
VPS36-202ENST00000462289 NKTRP30414 1462 aaKnown RBP8.45□□□□□ -1.06
VPS36-202ENST00000462289 CAPN5O15484 640 aaPredicted RBP8.44□□□□□ -1.06
VPS36-202ENST00000462289 CSPP1Q1MSJ5 1256 aa8.44□□□□□ -1.06
VPS36-202ENST00000462289 TRIM46Q7Z4K8 759 aa8.44□□□□□ -1.06
VPS36-202ENST00000462289 TXNDC2Q86VQ3 553 aa8.44□□□□□ -1.06
VPS36-202ENST00000462289 CDK15Q96Q40 435 aa8.44□□□□□ -1.06
VPS36-202ENST00000462289 TBX22Q9Y458 520 aa8.44□□□□□ -1.06
VPS36-202ENST00000462289 ADGRB1O14514 1584 aa8.44□□□□□ -1.06
VPS36-202ENST00000462289 CLSPNQ9HAW4 1339 aa8.43□□□□□ -1.06
VPS36-202ENST00000462289 TECPR2O15040 1411 aa8.43□□□□□ -1.06
VPS36-202ENST00000462289 BMP1P13497 986 aa8.42□□□□□ -1.06
VPS36-202ENST00000462289 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
VPS36-202ENST00000462289 NNTQ13423 1086 aa8.42□□□□□ -1.06
VPS36-202ENST00000462289 FAM174AQ8TBP5 190 aa8.42□□□□□ -1.06
VPS36-202ENST00000462289 FOXJ1Q92949 421 aa8.42□□□□□ -1.06
VPS36-202ENST00000462289 KLF16Q9BXK1 252 aaPredicted RBP8.42□□□□□ -1.06
VPS36-202ENST00000462289 RSPH6AQ9H0K4 717 aa8.42□□□□□ -1.06
VPS36-202ENST00000462289 EID1Q9Y6B2 187 aa8.42□□□□□ -1.06
VPS36-202ENST00000462289 PTPRUQ92729 1446 aa8.42□□□□□ -1.06
VPS36-202ENST00000462289 LRRC7Q96NW7 1537 aa8.42□□□□□ -1.06
VPS36-202ENST00000462289 NCOA3Q9Y6Q9 1424 aa8.41□□□□□ -1.06
VPS36-202ENST00000462289 NUTM2BA6NNL0 878 aaPredicted RBP8.41□□□□□ -1.06
VPS36-202ENST00000462289 NUTM2EB1AL46 878 aaPredicted RBP8.41□□□□□ -1.06
VPS36-202ENST00000462289 TERTO14746 1132 aaKnown RBP8.41□□□□□ -1.06
VPS36-202ENST00000462289 WIPF1O43516 503 aa8.41□□□□□ -1.06
VPS36-202ENST00000462289 ADH1CP00326 375 aa8.41□□□□□ -1.06
VPS36-202ENST00000462289 C4orf48Q5BLP8 95 aa8.41□□□□□ -1.06
VPS36-202ENST00000462289 LCE2CQ5TA81 110 aa8.41□□□□□ -1.06
VPS36-202ENST00000462289 NUTM2DQ5VT03 806 aaPredicted RBP8.41□□□□□ -1.06
VPS36-202ENST00000462289 NUTM2AQ8IVF1 878 aaPredicted RBP8.41□□□□□ -1.06
VPS36-202ENST00000462289 PTCH1Q13635 1447 aa8.4□□□□□ -1.06
VPS36-202ENST00000462289 ZNF335Q9H4Z2 1342 aaPredicted RBP8.4□□□□□ -1.06
VPS36-202ENST00000462289 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.06
VPS36-202ENST00000462289 SH3RF1Q7Z6J0 888 aa8.4□□□□□ -1.06
VPS36-202ENST00000462289 HELBQ8NG08 1087 aaPredicted RBP8.4□□□□□ -1.06
VPS36-202ENST00000462289 TRPM1Q7Z4N2 1603 aa8.4□□□□□ -1.07
VPS36-202ENST00000462289 METP08581 1390 aa8.39□□□□□ -1.07
VPS36-202ENST00000462289 ADGRF5Q8IZF2 1346 aa8.39□□□□□ -1.07
VPS36-202ENST00000462289 TIMP2P16035 220 aa8.39□□□□□ -1.07
VPS36-202ENST00000462289 BPHLQ86WA6 291 aaPredicted RBP8.39□□□□□ -1.07
VPS36-202ENST00000462289 ARMC2Q8NEN0 867 aa8.39□□□□□ -1.07
VPS36-202ENST00000462289 DLC1Q96QB1 1528 aa8.39□□□□□ -1.07
VPS36-202ENST00000462289 KCNA6P17658 529 aa8.38□□□□□ -1.07
VPS36-202ENST00000462289 TSC1Q92574 1164 aa8.38□□□□□ -1.07
VPS36-202ENST00000462289 C1QTNF2Q9BXJ5 285 aa8.38□□□□□ -1.07
VPS36-202ENST00000462289 C14orf93Q9H972 538 aaKnown RBP8.38□□□□□ -1.07
VPS36-202ENST00000462289 NALCNQ8IZF0 1738 aa8.37□□□□□ -1.07
VPS36-202ENST00000462289 NR5A1Q13285 461 aa8.37□□□□□ -1.07
VPS36-202ENST00000462289 SH3BP5LQ7L8J4 393 aa8.37□□□□□ -1.07
VPS36-202ENST00000462289 ARHGEF28Q8N1W1 1705 aaKnown RBP8.37□□□□□ -1.07
VPS36-202ENST00000462289 GPRASP1Q5JY77 1395 aa8.36□□□□□ -1.07
VPS36-202ENST00000462289 ABCC11Q96J66 1382 aa8.36□□□□□ -1.07
VPS36-202ENST00000462289 GRM5P41594 1212 aa8.36□□□□□ -1.07
VPS36-202ENST00000462289 WDR4P57081 412 aaKnown RBP8.36□□□□□ -1.07
VPS36-202ENST00000462289 NBPF14Q5TI25 921 aa8.36□□□□□ -1.07
VPS36-202ENST00000462289 NPAS3Q8IXF0 933 aa8.36□□□□□ -1.07
VPS36-202ENST00000462289 ZFP42Q96MM3 310 aa8.36□□□□□ -1.07
VPS36-202ENST00000462289 PCGF6Q9BYE7 350 aa8.36□□□□□ -1.07
VPS36-202ENST00000462289 NXF1Q9UBU9 619 aaKnown RBP8.36□□□□□ -1.07
VPS36-202ENST00000462289 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.36□□□□□ -1.07
VPS36-202ENST00000462289 DCCP43146 1447 aa8.36□□□□□ -1.07
VPS36-202ENST00000462289 FAM135BQ49AJ0 1406 aa8.36□□□□□ -1.07
VPS36-202ENST00000462289 LRPPRCP42704 1394 aaKnown RBP8.35□□□□□ -1.07
VPS36-202ENST00000462289 ADGRB2O60241 1585 aa8.35□□□□□ -1.07
VPS36-202ENST00000462289 MRPL14Q6P1L8 145 aaKnown RBP8.35□□□□□ -1.07
VPS36-202ENST00000462289 TRMT44Q8IYL2 757 aaKnown RBP8.35□□□□□ -1.07
VPS36-202ENST00000462289 SIRT1Q96EB6 747 aa8.35□□□□□ -1.07
VPS36-202ENST00000462289 SLC26A8Q96RN1 970 aa8.35□□□□□ -1.07
VPS36-202ENST00000462289 POLR3EQ9NVU0 708 aa8.35□□□□□ -1.07
VPS36-202ENST00000462289 MAP4K5Q9Y4K4 846 aa8.35□□□□□ -1.07
VPS36-202ENST00000462289 NR3C2P08235 984 aa8.34□□□□□ -1.07
VPS36-202ENST00000462289 AGERQ15109 404 aa8.34□□□□□ -1.07
VPS36-202ENST00000462289 SKIV2LQ15477 1246 aaKnown RBP8.34□□□□□ -1.07
VPS36-202ENST00000462289 ZNF326Q5BKZ1 582 aaKnown RBP8.34□□□□□ -1.07
VPS36-202ENST00000462289 SH3D19Q5HYK7 790 aa8.34□□□□□ -1.07
VPS36-202ENST00000462289 GPKOWQ92917 476 aaPredicted RBP eCLIP8.34□□□□□ -1.07
VPS36-202ENST00000462289 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.34□□□□□ -1.07
VPS36-202ENST00000462289 YTHDC2Q9H6S0 1430 aaKnown RBP8.34□□□□□ -1.07
VPS36-202ENST00000462289 CDC42BPGQ6DT37 1551 aa8.34□□□□□ -1.07
VPS36-202ENST00000462289 PPP1R15AO75807 674 aaPredicted RBP8.33□□□□□ -1.08
VPS36-202ENST00000462289 ARID5BQ14865 1188 aa8.33□□□□□ -1.08
VPS36-202ENST00000462289 RGL3Q3MIN7 710 aa8.33□□□□□ -1.08
VPS36-202ENST00000462289 L3MBTL2Q969R5 705 aa8.33□□□□□ -1.08
VPS36-202ENST00000462289 SIN3AQ96ST3 1273 aa8.33□□□□□ -1.08
VPS36-202ENST00000462289 KDM4CQ9H3R0 1056 aa8.33□□□□□ -1.08
VPS36-202ENST00000462289 ADGRL3Q9HAR2 1447 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms