RNA–Protein interactions for RNA: ENST00000462260.1

PCOLCE-203, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 554 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-203ENST00000462260 PLEKHF1Q96S99 279 aa18.25■□□□□ 0.51
PCOLCE-203ENST00000462260 TEX13AQ9BXU3 409 aaPredicted RBP18.25■□□□□ 0.51
PCOLCE-203ENST00000462260 PARP3Q9Y6F1 533 aa18.25■□□□□ 0.51
PCOLCE-203ENST00000462260 COL15A1P39059 1388 aa18.25■□□□□ 0.51
PCOLCE-203ENST00000462260 KIAA1551Q9HCM1 1747 aa18.24■□□□□ 0.51
PCOLCE-203ENST00000462260 KCNQ3O43525 872 aa18.24■□□□□ 0.51
PCOLCE-203ENST00000462260 ZPR1O75312 459 aa18.24■□□□□ 0.51
PCOLCE-203ENST00000462260 PXDNLA1KZ92 1463 aa18.24■□□□□ 0.51
PCOLCE-203ENST00000462260 TGFB2P61812 414 aa18.23■□□□□ 0.51
PCOLCE-203ENST00000462260 DDR1Q08345 913 aa18.23■□□□□ 0.51
PCOLCE-203ENST00000462260 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
PCOLCE-203ENST00000462260 USPL1Q5W0Q7 1092 aa18.23■□□□□ 0.51
PCOLCE-203ENST00000462260 NARFQ9UHQ1 456 aa18.23■□□□□ 0.51
PCOLCE-203ENST00000462260 CANXP27824 592 aaKnown RBP18.22■□□□□ 0.51
PCOLCE-203ENST00000462260 TM4SF1P30408 202 aa18.22■□□□□ 0.51
PCOLCE-203ENST00000462260 EIF5P55010 431 aaKnown RBP18.22■□□□□ 0.51
PCOLCE-203ENST00000462260 NEFMP07197 916 aa18.21■□□□□ 0.51
PCOLCE-203ENST00000462260 N4BP2Q86UW6 1770 aaPredicted RBP18.21■□□□□ 0.51
PCOLCE-203ENST00000462260 DLG5Q8TDM6 1919 aa18.21■□□□□ 0.51
PCOLCE-203ENST00000462260 POLRMTO00411 1230 aaKnown RBP18.2■□□□□ 0.5
PCOLCE-203ENST00000462260 PNNQ9H307 717 aaKnown RBP18.2■□□□□ 0.5
PCOLCE-203ENST00000462260 BCL2L12Q9HB09 334 aa18.2■□□□□ 0.5
PCOLCE-203ENST00000462260 WWC3Q9ULE0 1092 aa18.2■□□□□ 0.5
PCOLCE-203ENST00000462260 A0A0G2JLW4 131 aa18.19■□□□□ 0.5
PCOLCE-203ENST00000462260 MYBBP1AQ9BQG0 1328 aaKnown RBP18.19■□□□□ 0.5
PCOLCE-203ENST00000462260 DPEP1P16444 411 aa18.18■□□□□ 0.5
PCOLCE-203ENST00000462260 IL6STP40189 918 aaPredicted RBP18.18■□□□□ 0.5
PCOLCE-203ENST00000462260 NFIXQ14938 502 aa18.18■□□□□ 0.5
PCOLCE-203ENST00000462260 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
PCOLCE-203ENST00000462260 NFE2L2Q16236 605 aa18.18■□□□□ 0.5
PCOLCE-203ENST00000462260 A0A087WZG4 1122 aa18.17■□□□□ 0.5
PCOLCE-203ENST00000462260 A1BGP04217 495 aa18.17■□□□□ 0.5
PCOLCE-203ENST00000462260 SNRPA1P09661 255 aaKnown RBP18.17■□□□□ 0.5
PCOLCE-203ENST00000462260 KCNA3P22001 575 aa18.17■□□□□ 0.5
PCOLCE-203ENST00000462260 USP16Q9Y5T5 823 aa18.17■□□□□ 0.5
PCOLCE-203ENST00000462260 BRCA1P38398 1863 aaKnown RBP18.17■□□□□ 0.5
PCOLCE-203ENST00000462260 PRAMEF22A3QJZ6 481 aa18.16■□□□□ 0.5
PCOLCE-203ENST00000462260 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
PCOLCE-203ENST00000462260 AFDNP55196 1824 aaKnown RBP18.16■□□□□ 0.5
PCOLCE-203ENST00000462260 NRXN2Q9P2S2 1712 aa18.15■□□□□ 0.5
PCOLCE-203ENST00000462260 BCS1LQ9Y276 419 aa18.14■□□□□ 0.49
PCOLCE-203ENST00000462260 SCN7AQ01118 1682 aa18.14■□□□□ 0.49
PCOLCE-203ENST00000462260 KDM3BQ7LBC6 1761 aa18.13■□□□□ 0.49
PCOLCE-203ENST00000462260 SERPINB2P05120 415 aa18.13■□□□□ 0.49
PCOLCE-203ENST00000462260 PNISRQ8TF01 805 aaKnown RBP18.13■□□□□ 0.49
PCOLCE-203ENST00000462260 MIS18AQ9NYP9 233 aa18.13■□□□□ 0.49
PCOLCE-203ENST00000462260 TBC1D2BQ9UPU7 963 aa18.13■□□□□ 0.49
PCOLCE-203ENST00000462260 ZNF330Q9Y3S2 320 aaPredicted RBP18.13■□□□□ 0.49
PCOLCE-203ENST00000462260 THUMPD2Q9BTF0 503 aaKnown RBP18.12■□□□□ 0.49
PCOLCE-203ENST00000462260 CAMTA2O94983 1202 aa18.11■□□□□ 0.49
PCOLCE-203ENST00000462260 TBC1D9BQ66K14 1250 aa18.11■□□□□ 0.49
PCOLCE-203ENST00000462260 NPM2Q86SE8 214 aaKnown RBP18.11■□□□□ 0.49
PCOLCE-203ENST00000462260 PRKRIP1Q9H875 184 aaPredicted RBP18.11■□□□□ 0.49
PCOLCE-203ENST00000462260 PIM2Q9P1W9 311 aa18.11■□□□□ 0.49
PCOLCE-203ENST00000462260 ADCY9O60503 1353 aa18.11■□□□□ 0.49
PCOLCE-203ENST00000462260 ARFGEF1Q9Y6D6 1849 aa18.1■□□□□ 0.49
PCOLCE-203ENST00000462260 CHRNA5P30532 468 aa18.1■□□□□ 0.49
PCOLCE-203ENST00000462260 ZEB1P37275 1124 aaPredicted RBP18.1■□□□□ 0.49
PCOLCE-203ENST00000462260 PIP4K2AP48426 406 aaPredicted RBP18.1■□□□□ 0.49
PCOLCE-203ENST00000462260 BICDL1Q6ZP65 573 aa18.1■□□□□ 0.49
PCOLCE-203ENST00000462260 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
PCOLCE-203ENST00000462260 NBPF26B4DH59 902 aa18.09■□□□□ 0.49
PCOLCE-203ENST00000462260 RIPK4P57078 832 aa18.09■□□□□ 0.49
PCOLCE-203ENST00000462260 EIF4A1P60842 406 aaKnown RBP18.09■□□□□ 0.49
PCOLCE-203ENST00000462260 NBPF10Q6P3W6 841 aaKnown RBP18.09■□□□□ 0.49
PCOLCE-203ENST00000462260 DZIP3Q86Y13 1208 aaKnown RBP18.09■□□□□ 0.49
PCOLCE-203ENST00000462260 NBPF15Q8N660 670 aa18.09■□□□□ 0.49
PCOLCE-203ENST00000462260 ATP10DQ9P241 1426 aa18.08■□□□□ 0.49
PCOLCE-203ENST00000462260 GIGYF1O75420 1035 aaPredicted RBP18.08■□□□□ 0.48
PCOLCE-203ENST00000462260 TMPOP42166 694 aaKnown RBP18.08■□□□□ 0.48
PCOLCE-203ENST00000462260 DALRD3Q5D0E6 543 aaKnown RBP18.08■□□□□ 0.48
PCOLCE-203ENST00000462260 LAMB4A4D0S4 1761 aa18.08■□□□□ 0.48
PCOLCE-203ENST00000462260 CARMIL3Q8ND23 1372 aa18.07■□□□□ 0.48
PCOLCE-203ENST00000462260 ARHGAP27Q6ZUM4 889 aa18.06■□□□□ 0.48
PCOLCE-203ENST00000462260 DLEC1Q9Y238 1755 aa18.05■□□□□ 0.48
PCOLCE-203ENST00000462260 LMOD3Q0VAK6 560 aa18.05■□□□□ 0.48
PCOLCE-203ENST00000462260 WDR43Q15061 677 aaKnown RBP eCLIP18.05■□□□□ 0.48
PCOLCE-203ENST00000462260 CLEC4GQ6UXB4 293 aa18.05■□□□□ 0.48
PCOLCE-203ENST00000462260 CCDC146Q8IYE0 955 aa18.05■□□□□ 0.48
PCOLCE-203ENST00000462260 SETDB2Q96T68 719 aa18.05■□□□□ 0.48
PCOLCE-203ENST00000462260 ADAMTS8Q9UP79 889 aa18.05■□□□□ 0.48
PCOLCE-203ENST00000462260 ANKRD31Q8N7Z5 1873 aa18.04■□□□□ 0.48
PCOLCE-203ENST00000462260 RGL2O15211 777 aa18.04■□□□□ 0.48
PCOLCE-203ENST00000462260 PRR5LQ6MZQ0 368 aa18.04■□□□□ 0.48
PCOLCE-203ENST00000462260 RUNDC1Q96C34 613 aa18.04■□□□□ 0.48
PCOLCE-203ENST00000462260 BABAM1Q9NWV8 329 aa18.04■□□□□ 0.48
PCOLCE-203ENST00000462260 BRIP1Q9BX63 1249 aa18.03■□□□□ 0.48
PCOLCE-203ENST00000462260 TSPYL4Q9UJ04 414 aa18.03■□□□□ 0.48
PCOLCE-203ENST00000462260 ZNF652Q9Y2D9 606 aa18.03■□□□□ 0.48
PCOLCE-203ENST00000462260 RRP7AQ9Y3A4 280 aaKnown RBP18.03■□□□□ 0.48
PCOLCE-203ENST00000462260 H0YIN7 160 aa18.02■□□□□ 0.48
PCOLCE-203ENST00000462260 C1QTNF8P60827 252 aa18.02■□□□□ 0.48
PCOLCE-203ENST00000462260 C2CD5Q86YS7 1000 aa18.02■□□□□ 0.48
PCOLCE-203ENST00000462260 GPBP1L1Q9HC44 474 aaPredicted RBP18.02■□□□□ 0.48
PCOLCE-203ENST00000462260 NEUROD2Q15784 382 aa18.01■□□□□ 0.47
PCOLCE-203ENST00000462260 CCDC24Q8N4L8 307 aa18.01■□□□□ 0.47
PCOLCE-203ENST00000462260 TTLL6Q8N841 843 aa18.01■□□□□ 0.47
PCOLCE-203ENST00000462260 CNBD1Q8NA66 436 aa18.01■□□□□ 0.47
PCOLCE-203ENST00000462260 TRIM35Q9UPQ4 493 aa18.01■□□□□ 0.47
PCOLCE-203ENST00000462260 PDZRN3Q9UPQ7 1066 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms