RNA–Protein interactions for RNA: ENST00000462125.5

C9orf3-210, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-210ENST00000462125 PNNQ9H307 717 aaKnown RBP17.57■□□□□ 0.4
C9orf3-210ENST00000462125 NARFQ9UHQ1 456 aa17.57■□□□□ 0.4
C9orf3-210ENST00000462125 UBR2Q8IWV8 1755 aa17.56■□□□□ 0.4
C9orf3-210ENST00000462125 KCNQ3O43525 872 aa17.56■□□□□ 0.4
C9orf3-210ENST00000462125 EIF5P55010 431 aaKnown RBP17.56■□□□□ 0.4
C9orf3-210ENST00000462125 TGFB2P61812 414 aa17.56■□□□□ 0.4
C9orf3-210ENST00000462125 PARP3Q9Y6F1 533 aa17.56■□□□□ 0.4
C9orf3-210ENST00000462125 ZPR1O75312 459 aa17.55■□□□□ 0.4
C9orf3-210ENST00000462125 NEFMP07197 916 aa17.55■□□□□ 0.4
C9orf3-210ENST00000462125 DCTN1Q14203 1278 aa17.55■□□□□ 0.4
C9orf3-210ENST00000462125 USPL1Q5W0Q7 1092 aa17.55■□□□□ 0.4
C9orf3-210ENST00000462125 SIPA1L3O60292 1781 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-210ENST00000462125 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
C9orf3-210ENST00000462125 TAF7Q15545 349 aaPredicted RBP17.54■□□□□ 0.4
C9orf3-210ENST00000462125 CEP350Q5VT06 3117 aa17.54■□□□□ 0.4
C9orf3-210ENST00000462125 C4AP0C0L4 1744 aa17.53■□□□□ 0.4
C9orf3-210ENST00000462125 DDR1Q08345 913 aa17.53■□□□□ 0.4
C9orf3-210ENST00000462125 BCL2L12Q9HB09 334 aa17.53■□□□□ 0.4
C9orf3-210ENST00000462125 COL15A1P39059 1388 aa17.53■□□□□ 0.4
C9orf3-210ENST00000462125 MYBBP1AQ9BQG0 1328 aaKnown RBP17.52■□□□□ 0.4
C9orf3-210ENST00000462125 POLRMTO00411 1230 aaKnown RBP17.52■□□□□ 0.4
C9orf3-210ENST00000462125 IL6STP40189 918 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-210ENST00000462125 NFE2L2Q16236 605 aa17.52■□□□□ 0.4
C9orf3-210ENST00000462125 USP16Q9Y5T5 823 aa17.52■□□□□ 0.4
C9orf3-210ENST00000462125 C10orf71Q711Q0 1435 aa17.52■□□□□ 0.4
C9orf3-210ENST00000462125 CHD4Q14839 1912 aa17.52■□□□□ 0.4
C9orf3-210ENST00000462125 A0A087WZG4 1122 aa17.51■□□□□ 0.39
C9orf3-210ENST00000462125 A0A0G2JLW4 131 aa17.5■□□□□ 0.39
C9orf3-210ENST00000462125 A1BGP04217 495 aa17.5■□□□□ 0.39
C9orf3-210ENST00000462125 SNRPA1P09661 255 aaKnown RBP17.5■□□□□ 0.39
C9orf3-210ENST00000462125 C1QTNF8P60827 252 aa17.5■□□□□ 0.39
C9orf3-210ENST00000462125 NFIXQ14938 502 aa17.5■□□□□ 0.39
C9orf3-210ENST00000462125 PXDNLA1KZ92 1463 aa17.5■□□□□ 0.39
C9orf3-210ENST00000462125 KIF13BQ9NQT8 1826 aa17.49■□□□□ 0.39
C9orf3-210ENST00000462125 KCNA3P22001 575 aa17.49■□□□□ 0.39
C9orf3-210ENST00000462125 PNISRQ8TF01 805 aaKnown RBP17.49■□□□□ 0.39
C9orf3-210ENST00000462125 PRAMEF22A3QJZ6 481 aa17.48■□□□□ 0.39
C9orf3-210ENST00000462125 DPEP1P16444 411 aa17.48■□□□□ 0.39
C9orf3-210ENST00000462125 PRKRIP1Q9H875 184 aaPredicted RBP17.48■□□□□ 0.39
C9orf3-210ENST00000462125 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
C9orf3-210ENST00000462125 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
C9orf3-210ENST00000462125 TBC1D2BQ9UPU7 963 aa17.46■□□□□ 0.39
C9orf3-210ENST00000462125 KIAA1551Q9HCM1 1747 aa17.45■□□□□ 0.38
C9orf3-210ENST00000462125 SERPINB2P05120 415 aa17.45■□□□□ 0.38
C9orf3-210ENST00000462125 WWC3Q9ULE0 1092 aa17.45■□□□□ 0.38
C9orf3-210ENST00000462125 TMPOP42166 694 aaKnown RBP17.44■□□□□ 0.38
C9orf3-210ENST00000462125 RIPK4P57078 832 aa17.44■□□□□ 0.38
C9orf3-210ENST00000462125 THUMPD2Q9BTF0 503 aaKnown RBP17.44■□□□□ 0.38
C9orf3-210ENST00000462125 PIM2Q9P1W9 311 aa17.44■□□□□ 0.38
C9orf3-210ENST00000462125 GIGYF1O75420 1035 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-210ENST00000462125 CAMTA2O94983 1202 aa17.43■□□□□ 0.38
C9orf3-210ENST00000462125 EIF4A1P60842 406 aaKnown RBP17.43■□□□□ 0.38
C9orf3-210ENST00000462125 TBC1D9BQ66K14 1250 aa17.43■□□□□ 0.38
C9orf3-210ENST00000462125 NPM2Q86SE8 214 aaKnown RBP17.43■□□□□ 0.38
C9orf3-210ENST00000462125 BCS1LQ9Y276 419 aa17.43■□□□□ 0.38
C9orf3-210ENST00000462125 NBPF26B4DH59 902 aa17.42■□□□□ 0.38
C9orf3-210ENST00000462125 RGL2O15211 777 aa17.42■□□□□ 0.38
C9orf3-210ENST00000462125 NBPF10Q6P3W6 841 aaKnown RBP17.42■□□□□ 0.38
C9orf3-210ENST00000462125 DZIP3Q86Y13 1208 aaKnown RBP17.42■□□□□ 0.38
C9orf3-210ENST00000462125 NBPF15Q8N660 670 aa17.42■□□□□ 0.38
C9orf3-210ENST00000462125 BABAM1Q9NWV8 329 aa17.42■□□□□ 0.38
C9orf3-210ENST00000462125 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
C9orf3-210ENST00000462125 ZNF330Q9Y3S2 320 aaPredicted RBP17.42■□□□□ 0.38
C9orf3-210ENST00000462125 DLG5Q8TDM6 1919 aa17.41■□□□□ 0.38
C9orf3-210ENST00000462125 CLEC4GQ6UXB4 293 aa17.41■□□□□ 0.38
C9orf3-210ENST00000462125 BICDL1Q6ZP65 573 aa17.41■□□□□ 0.38
C9orf3-210ENST00000462125 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
C9orf3-210ENST00000462125 N4BP2Q86UW6 1770 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-210ENST00000462125 CHRNA5P30532 468 aa17.4■□□□□ 0.38
C9orf3-210ENST00000462125 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
C9orf3-210ENST00000462125 LMOD3Q0VAK6 560 aa17.4■□□□□ 0.38
C9orf3-210ENST00000462125 WDR43Q15061 677 aaKnown RBP eCLIP17.4■□□□□ 0.38
C9orf3-210ENST00000462125 NRXN2Q9P2S2 1712 aa17.39■□□□□ 0.37
C9orf3-210ENST00000462125 DALRD3Q5D0E6 543 aaKnown RBP17.39■□□□□ 0.37
C9orf3-210ENST00000462125 SETDB2Q96T68 719 aa17.39■□□□□ 0.37
C9orf3-210ENST00000462125 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
C9orf3-210ENST00000462125 ADCY9O60503 1353 aa17.38■□□□□ 0.37
C9orf3-210ENST00000462125 ARHGAP27Q6ZUM4 889 aa17.37■□□□□ 0.37
C9orf3-210ENST00000462125 BRIP1Q9BX63 1249 aa17.37■□□□□ 0.37
C9orf3-210ENST00000462125 TSPYL4Q9UJ04 414 aa17.37■□□□□ 0.37
C9orf3-210ENST00000462125 TRIM35Q9UPQ4 493 aa17.37■□□□□ 0.37
C9orf3-210ENST00000462125 PDZRN3Q9UPQ7 1066 aa17.37■□□□□ 0.37
C9orf3-210ENST00000462125 AFDNP55196 1824 aaKnown RBP17.37■□□□□ 0.37
C9orf3-210ENST00000462125 CARMIL3Q8ND23 1372 aa17.37■□□□□ 0.37
C9orf3-210ENST00000462125 BRCA1P38398 1863 aaKnown RBP17.36■□□□□ 0.37
C9orf3-210ENST00000462125 PRR5LQ6MZQ0 368 aa17.36■□□□□ 0.37
C9orf3-210ENST00000462125 RRP7AQ9Y3A4 280 aaKnown RBP17.36■□□□□ 0.37
C9orf3-210ENST00000462125 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
C9orf3-210ENST00000462125 H0YIN7 160 aa17.35■□□□□ 0.37
C9orf3-210ENST00000462125 CHL1O00533 1208 aa17.35■□□□□ 0.37
C9orf3-210ENST00000462125 ZNF652Q9Y2D9 606 aa17.35■□□□□ 0.37
C9orf3-210ENST00000462125 PDE6BP35913 854 aa17.34■□□□□ 0.37
C9orf3-210ENST00000462125 SCN7AQ01118 1682 aa17.34■□□□□ 0.37
C9orf3-210ENST00000462125 NEUROD2Q15784 382 aa17.34■□□□□ 0.37
C9orf3-210ENST00000462125 C2CD5Q86YS7 1000 aa17.34■□□□□ 0.37
C9orf3-210ENST00000462125 ATP10DQ9P241 1426 aa17.34■□□□□ 0.37
C9orf3-210ENST00000462125 ERBB4Q15303 1308 aa17.33■□□□□ 0.36
C9orf3-210ENST00000462125 ZNF316A6NFI3 1004 aaPredicted RBP17.33■□□□□ 0.36
C9orf3-210ENST00000462125 ERVV-1B6SEH8 477 aa17.33■□□□□ 0.36
C9orf3-210ENST00000462125 TTLL6Q8N841 843 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms